Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_023584.1
Length=170438
Score E
Sequences producing significant alignments: (Bits) Value
seq509954 168 7e-37
>seq509954
Length=433
Score = 168 bits (186), Expect = 7e-37
Identities = 246/348 (71%), Gaps = 0/348 (0%)
Strand=Plus/Plus
Query 108253 GCACAGGACCTCAAGGCGATTCATGGTTTGGATGCCGAGCAAGAGCTCGCCAACATCCTC 108312
|| ||||| | || || | ||||| ||||| || || |||| || || || || ||
Sbjct 3 GCTCAGGATATGAAAGCTGTACATGGCTTGGACGCAGAAGAAGAACTTGCAAATATTCTT 62
Query 108313 AGCACTGAGATCCTTGCTGAAATCAACCGTGAAGTTGTTCGTACCATCTACACAAACGCT 108372
||||| || ||||| ||||| |||||||| | |||||||| | || ||| ||
Sbjct 63 TCAACTGAAATTCTTGCAGAAATTAACCGTGAGCTAATTCGTACCGTATATGCAACTGCA 122
Query 108373 GTTGCTGGTGCTCAGAACAATACCGCCAACGCTGGTATCTTTGACCTCGACGTTGATTCC 108432
||||||| || | | | || |||||||||||||| || | ||||| ||| |
Sbjct 123 AAACCTGGTGCACAAACTGGTTCAGCAAACGCTGGTATCTTCGATTTAGACGTAGATGCA 182
Query 108433 AACGGCAGATGGTCTGTTGAGAAGTTCAAAGGACTTCTGTTCCAGATTGAGCGCGATGCT 108492
|| || | ||||| || || || |||||||||||| ||||||| ||||| || ||||||
Sbjct 183 AATGGTCGCTGGTCAGTAGAAAAATTCAAAGGACTTATGTTCCAAATTGAACGTGATGCT 242
Query 108493 AACGCTATCGGTCAGCAAACTCGTCGTGGCAAAGGCAACATCCTGATCTGTTCTGCCGAC 108552
||| |||| | | |||| | ||||| ||||| ||| | | |||||||| | |||
Sbjct 243 AACCAAATCGCTAAAGAAACCAGACGTGGTAAAGGTAACTTTATTATCTGTTCATCTGAC 302
Query 108553 GTTGCTTCTGCACTGGGCATGGCTGGTGTTCTTGACTACACCCCTGCT 108600
|| ||||||||| ||| ||||| | ||||| | | | ||||||
Sbjct 303 GTAGCTTCTGCATTGGCTGCTGCTGGAATCCTTGATTTCGCACCTGCT 350
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 541691820408160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |