Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_023584.1 Length=170438 Score E Sequences producing significant alignments: (Bits) Value seq509954 168 7e-37 >seq509954 Length=433 Score = 168 bits (186), Expect = 7e-37 Identities = 246/348 (71%), Gaps = 0/348 (0%) Strand=Plus/Plus Query 108253 GCACAGGACCTCAAGGCGATTCATGGTTTGGATGCCGAGCAAGAGCTCGCCAACATCCTC 108312 || ||||| | || || | ||||| ||||| || || |||| || || || || || Sbjct 3 GCTCAGGATATGAAAGCTGTACATGGCTTGGACGCAGAAGAAGAACTTGCAAATATTCTT 62 Query 108313 AGCACTGAGATCCTTGCTGAAATCAACCGTGAAGTTGTTCGTACCATCTACACAAACGCT 108372 ||||| || ||||| ||||| |||||||| | |||||||| | || ||| || Sbjct 63 TCAACTGAAATTCTTGCAGAAATTAACCGTGAGCTAATTCGTACCGTATATGCAACTGCA 122 Query 108373 GTTGCTGGTGCTCAGAACAATACCGCCAACGCTGGTATCTTTGACCTCGACGTTGATTCC 108432 ||||||| || | | | || |||||||||||||| || | ||||| ||| | Sbjct 123 AAACCTGGTGCACAAACTGGTTCAGCAAACGCTGGTATCTTCGATTTAGACGTAGATGCA 182 Query 108433 AACGGCAGATGGTCTGTTGAGAAGTTCAAAGGACTTCTGTTCCAGATTGAGCGCGATGCT 108492 || || | ||||| || || || |||||||||||| ||||||| ||||| || |||||| Sbjct 183 AATGGTCGCTGGTCAGTAGAAAAATTCAAAGGACTTATGTTCCAAATTGAACGTGATGCT 242 Query 108493 AACGCTATCGGTCAGCAAACTCGTCGTGGCAAAGGCAACATCCTGATCTGTTCTGCCGAC 108552 ||| |||| | | |||| | ||||| ||||| ||| | | |||||||| | ||| Sbjct 243 AACCAAATCGCTAAAGAAACCAGACGTGGTAAAGGTAACTTTATTATCTGTTCATCTGAC 302 Query 108553 GTTGCTTCTGCACTGGGCATGGCTGGTGTTCTTGACTACACCCCTGCT 108600 || ||||||||| ||| ||||| | ||||| | | | |||||| Sbjct 303 GTAGCTTCTGCATTGGCTGCTGCTGGAATCCTTGATTTCGCACCTGCT 350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 541691820408160