Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_023587.1 Length=189311 Score E Sequences producing significant alignments: (Bits) Value seq509954 122 1e-22 >seq509954 Length=433 Score = 122 bits (134), Expect = 1e-22 Identities = 199/283 (70%), Gaps = 4/283 (1%) Strand=Plus/Plus Query 114176 GACGCTGAGCAAGAACTTGCTAACCTTCTGTCTAGTGAGATCCTTGCTGAAATCAACCGC 114235 ||||| || |||||||||| || |||| || | ||| || ||||| ||||| ||||| Sbjct 33 GACGCAGAAGAAGAACTTGCAAATATTCTTTCAACTGAAATTCTTGCAGAAATTAACCGT 92 Query 114236 GAAGTCGTCCGTACCGTCTACACCGTTGCTAAGCCTGGTGCTCAGAACAACGTT--GCCG 114293 || | | |||||||| || | ||| || |||||||| || ||| ||| || Sbjct 93 GAGCTAATTCGTACCGTATATGCAACTGCAAAACCTGGTGCACA-AACTG-GTTCAGCAA 150 Query 114294 CTGCTGGTAAGTTTGACCTTGACGTTGACTCCAACGGTCGTTGGTCGGTTGAGAAGTTTA 114353 ||||||| || || | ||||| || | || ||||| ||||| || || || || | Sbjct 151 ACGCTGGTATCTTCGATTTAGACGTAGATGCAAATGGTCGCTGGTCAGTAGAAAAATTCA 210 Query 114354 AGGGACTTATGTTCCAGATCGAAAGAGATGCTAACGCGATCGCGCAGCAGACTCGTAGAG 114413 | |||||||||||||| || ||| | ||||||||| ||||| | | || | | | Sbjct 211 AAGGACTTATGTTCCAAATTGAACGTGATGCTAACCAAATCGCTAAAGAAACCAGACGTG 270 Query 114414 GAAAGGGCAACTTCATCATCACTTCTGCTGATGTAGCTTCCGC 114456 | || || ||||| || ||| ||| |||| |||||||| || Sbjct 271 GTAAAGGTAACTTTATTATCTGTTCATCTGACGTAGCTTCTGC 313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 601688708438320