Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_023594.2
Length=54791
Score E
Sequences producing significant alignments: (Bits) Value
seq500878 136 1e-27
seq268385 131 6e-26
seq520575 129 2e-25
seq503300 123 9e-24
>seq500878
Length=594
Score = 136 bits (150), Expect = 1e-27
Identities = 110/133 (83%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 16102 CTTAGATGCCGTACCAGATATCGATAGCGCGAGGATAAGTAACCTCTAAGCCACCGAAGC 16161
||||||||||||||||||| ||||| ||||| || || ||||| || | ||| ||||||
Sbjct 459 CTTAGATGCCGTACCAGATGTCGATTGCGCGCGGGTAGGTAACTTCCAGACCAGCGAAGC 518
Query 16162 GACCACGACCTGGAACTTCGTACACTAGGCCGTGAATCTGTACTGGCATGAATTGCAGTG 16221
||||||| || ||||||| |||||| | |||||| | || ||||||| ||||||||| |
Sbjct 519 GACCACGGCCCGGAACTTGGTACACCAAGCCGTGCAGTTGAACTGGCAGGAATTGCAGCG 578
Query 16222 GCAGAGTTTCGCG 16234
|||||| ||| ||
Sbjct 579 GCAGAGGTTCACG 591
>seq268385
Length=1441
Score = 131 bits (144), Expect = 6e-26
Identities = 191/268 (71%), Gaps = 4/268 (1%)
Strand=Plus/Minus
Query 24678 AAGGTTACAGTAGCAGAGCCACCGCGACCCACTTGTGTAAACATCTTCACAGCAGTGTCG 24737
|| || ||||||||||||||||| || | |||||||||||||| || ||||| ||||
Sbjct 613 AATGTAACAGTAGCAGAGCCACCTCGGCTAACTTGTGTAAACATTTTAACAGCTTTGTCC 554
Query 24738 ATGTTCGCGTACAAAGGTTGCTTGCCTAAATGCTTGATAC--GGCCACCTTTGACATCTG 24795
| ||| ||| | ||| ||||| |||| ||| | ||| | || || || ||| |
Sbjct 553 ACTGTCGAGTAGATAGGGTGCTTACCTAGATG--AGCTACTTGACCGCCCTTAACAGGAG 496
Query 24796 TGCCTTTCGCGCGTGTCGCAAGCTCAATACCAATACCAGCTTTCTTAGCAGTCATTTTGT 24855
||| | | || || | || ||||||||| || || || |||||||| ||||| || |
Sbjct 495 AGCCAATGGAACGGGTTGTAAACTCAATACCGATGCCCGCCTTCTTAGCTGTCATCTTAT 436
Query 24856 ATGCTAAATGAGAAGCTACACCAATCGAGTCGACGGTGTCGCCGCCTGTAATTACAGAGC 24915
|||| | ||| ||| || || || ||| |||| ||| ||||| |||| ||| | |
Sbjct 435 ATGCGATATGCTCAGCAACGCCGATACTGTCTACGGAGTCACCGCCACTAATAACACAAC 376
Query 24916 AGCTGATAGAATCGAAGTCGCCGTTACG 24943
| || ||| ||||| || || |||||
Sbjct 375 AACTAATACTGTCGAAATCACCATTACG 348
>seq520575
Length=499
Score = 129 bits (142), Expect = 2e-25
Identities = 306/460 (67%), Gaps = 2/460 (0%)
Strand=Plus/Minus
Query 21239 TTGCCACGTAAGAGATAACCTACGAGGTCTTCGTCGTGCACCCGCTGCATGATAACCACG 21298
||||| || | || || || || ||||| ||||| || ||||||||||| |||| |
Sbjct 492 TTGCCGCGAAGAAGGTAGCCCACAAGGTCCTCGTCATGTACCCGCTGCATAATAATAGCT 433
Query 21299 ATTGGCGTGCGTGCGCAGGTAATTTGCTCACCATCAGGGCCAGTAACAACGCCGTCATTA 21358
| || || || || || | | | | ||| || | || |||| || |||
Sbjct 432 ACAGGTGTACGAGCACACTTTACACGGTTACCTTCTTCATCCTGCACCTCGCCATCGTTA 373
Query 21359 GCGAGTCGCGACATGAACGTGTTGTCGTAGCGGTCATTGATTTCTGTCCGTACTTGATTG 21418
|| || |||||||| | ||||||||||| || || || || || || || || ||||
Sbjct 372 GCAAGGCGCGACATCAGGGTGTTGTCGTAACGATCGTTAATCTCGGTACGAACAGCATTG 313
Query 21419 GAATACGCGTCTTTCGGTTTGATGACGTCGTCCACCACCAAGCA-GCCAGAGTAGACAAT 21477
|| || || || || || ||||| | ||| || | ||| ||| | ||||||||| | |
Sbjct 312 GAGTATGCATCCTTGGGCTTGATAATGTCATCGAGCAC-AAGTACGCCAGAGTACTTAGT 254
Query 21478 CGAGAGTGAACCAGCACCCTTCCCTGTCATCTTACCGCCCGTTGGCACAGCGTTCATTAC 21537
|| | |||||||||||| ||||||| ||||||||| | || || |||| | ||
Sbjct 253 AGACAAGCTACCAGCACCCTTACCTGTCAACTTACCGCCAGACGGAACTGCGTGAAGCAC 194
Query 21538 ACCAGCACGTGTGGTACCCCAACGTTCCAGCGAGCGCTTGTTCGGGTCAATGCGTACAGC 21597
|| | || ||||||||||| || || || || | |||||| ||||
Sbjct 193 GCCGCCTTTAGTTGTACCCCAACGCTCAAGACTCCGTTTCGAGGAGTCAATCTTTACATG 134
Query 21598 AGGGAAGATCTTTTGGAACAGGCCTTCCAGCATAATCTGTCTGATATAACCTGATGATTC 21657
||| || | | |||| | | |||||| || ||| || || || |||
Sbjct 133 AGGAAACACCCGACCAAACAACTCGTTAGTCATAATGGTTCGGATGTAGCCAGAGCTTTC 74
Query 21658 CGACACAACGTCATCCGCATACGACGTGATGATATTGTGG 21697
||||||||||| ||||| || |||||||||||||||
Sbjct 73 ACCAACAACGTCATCAGCATAAGAGGTGATGATATTGTGG 34
>seq503300
Length=1332
Score = 123 bits (136), Expect = 9e-24
Identities = 213/304 (70%), Gaps = 4/304 (1%)
Strand=Plus/Plus
Query 19152 AGCATGTCAATGTAGTTGTTCAAG-TCAGATTCACCAGTAGCATTCATACCATCTGGAGA 19210
|||| ||||| |||||| |||| ||| |||||||| ||||||| ||| ||| ||
Sbjct 1028 AGCAAGTCAACGTAGTTAA-CAAGATCACTCTCACCAGTTGCATTCAACCCACTTGGGGA 1086
Query 19211 CGCCGACAGGAATCGTGTGGCGGGAATACCACAAGCCGCTGCTACAA-TACGAAGATATT 19269
|| |||| ||| || || || || |||||| ||| || || | | | | ||| || |
Sbjct 1087 TGCAGACAAGAAGCGAGTTGCAGGGATACCAACAGCAGCGGCGATTACTTCCAAG-TACT 1145
Query 19270 CCCAGATCAAATCCTTCACGCCGTTGAGCGCGATGGTCTTTGTGGTGTATTCTTCTGTGT 19329
||||||||| ||||||||||| | | || |||| || ||||||||| ||
Sbjct 1146 CCCAGATCATGTCCTTCACGCCAGACAAGGAAATCTTCTTGCTGTCGTATTCTTCGTTGC 1205
Query 19330 CGTCGAGCACTAATACGTTATGGTTGGACTTTAGAGTCTTCATCATACGGAAGCGCTTCA 19389
|| |||| | ||||| | | ||||||| | |||||||| ||||||||||||||
Sbjct 1206 TATCCAGCAGGATAACGTTGTAGATGGACTTCATCTGCTTCATCAAACGGAAGCGCTTCA 1265
Query 19390 TCACAGCTTGCTCACCTGCAGGATGCGTAAGTAACTGTTGCAGGCCTTGCACGGTCACTA 19449
|||| || ||||| ||||| || || || | || ||||| | | ||| ||||
Sbjct 1266 TCACCGCAGCTTCACCCGCAGGGGAAGTCAGCAAGTTCTGTAGGCCGTTGATGGTAACTA 1325
Query 19450 CGTC 19453
||||
Sbjct 1326 CGTC 1329
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 174116233181772
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |