Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq79730 212 5e-49
seq439426 143 2e-28
seq340775 120 2e-21
seq300954 118 8e-21
seq413528 109 4e-18
seq280032 109 4e-18
seq509470 93.3 3e-13
seq137853 93.3 3e-13
seq525344 86.0 5e-11
>seq79730
Length=2051
Score = 212 bits (234), Expect = 5e-49
Identities = 938/1469 (64%), Gaps = 16/1469 (1%)
Strand=Plus/Plus
Query 281416 TTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAAT 281475
||| || |||| | || || ||||| || |||||||| | || || || || || |
Sbjct 531 TTTGTCGACGGCGGATACGTTCAGAATGCCGTTGGCATCAATGTCGAAAGTTACCTCCAC 590
Query 281476 TTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATT 281535
|| || || |||| ||||||| ||||| || | | | ||| | ||||| ||
Sbjct 591 CTGTGGTACACCTCGGGGAGCAGGAGGGATGCCGGCAAGCTCAAACTTGCCCAGGAGGTT 650
Query 281536 ATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATT 281595
|| || || || | || || ||||| | | || || || ||| || ||
Sbjct 651 GTTGTCCTTGGTCATGGCTCTCTCGCCCTCATACACCTGAATTAGCACACCAGGCTGGTT 710
Query 281596 ATCTGAATAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAA 281654
||| | || || | || | ||||| ||| || | || || || ||||| | | |
Sbjct 711 ATCAGCGTAGGTGGAGAAGA-TCTGGGTTTGCTTGCTGGGGATAGTGGTGTTGCGTTTGA 769
Query 281655 TAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAA 281714
| | ||||| | |||||| | || || | ||| ||||| || |||| || || |
Sbjct 770 TTAGCGGCGTCATGACTCCACCAACAGTCTCAATACCCAGAGACAGGGGAGCCACGTCCA 829
Query 281715 CTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAG 281774
|| | | || ||| | || || ||| | || | || || || || || | |
Sbjct 830 GCAGCAGCAGATCTTGGACGTTCTCTGAAGTGTCTCCCATGAGGATGGCAGCCTGGACTG 889
Query 281775 CAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGA 281834
| |||||||| || || |||||||| || || | | | | || |||| | | ||||| |
Sbjct 890 CTGCACCATAAGCCACTGCTTCATCTGGGTTGATACTCTTGTTCAGTTCTCTGCCATTAA 949
Query 281835 AAAAAT-TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACA 281893
| |||| ||| ||||| || | | || ||||| | | || || ||||| | ||
Sbjct 950 AGAAATCTTGCAAGAACTTCTGG-ATTTTGGGAATTCTTGTGGAGCCACCAACCAGGACG 1008
Query 281894 ATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCA 281953
|||||||| | | || ||||||| || ||||| || |||| || || || ||
Sbjct 1009 ATTTCATGGATCATGGACTTATCCATCTTGGAATCTTTTAGGGCTTTCTCCACTGGCTCC 1068
Query 281954 AGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACA 282013
|| | || || | ||||| || || || || || || || || ||
Sbjct 1069 AGTGTTCCCCTGAAGAGCTCTGAGTTGAGCTCCTCAAAGCGTGCCCTTGT--GATGGAGG 1126
Query 282014 T-TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAG 282071
| || || || || || || |||| ||| || | |||||| | | || || || |
Sbjct 1127 TGTAGAAGTCGATGCCCTCAAACAGAGAGTCGATTTCAATGCTGGCCTGGGTGCTTGAGG 1186
Query 282072 ATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATT 282131
| || | | || || | |||||| || || | ||||| | | ||| | || |||
Sbjct 1187 ACAGGGTCCTCTTCGCTCTTTCACAAGCGGTGCGCAGTCTCCTAACTGCTCT--CTTATT 1244
Query 282132 --GATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACG 282189
| | | ||| | || | ||||| || || || |||| | | || | ||
Sbjct 1245 TTGGCTGATGTCTTTCTTGTGCTTTCTTTTAAATTCCTCAAGGAAGTGACTGACCATCCG 1304
Query 282190 ATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG 282249
||| ||||| || || || || | | || | ||||| || ||| |||| | || |
Sbjct 1305 ATTGTCAAAGTCCTCTCCACCAAGGTGTGTGTCTCCTGCAGTGGCTTTTACCTCAAAGAT 1364
Query 282250 TCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAG 282309
||||| |||| | || | | || || ||| || ||||| | |||||| || ||
Sbjct 1365 GCCATCCTCAATGGTCAGGATGGACACGTCGAAGGTGCCTCCACCGAGATCAAAGATGAG 1424
Query 282310 TACATTCATTTCTTTGTCTTGGTT-TTTATCAAGACCATACGCAAAAGCAGCAGCAGTTG 282368
|| || ||| |||| | |||||| | || || |||| || || || || |
Sbjct 1425 CACGTTGCGCTCTCC-TCTTTTTCCTTTATCCAAGCCGTAGGCAATCGCTGCTGCTGTGG 1483
Query 282369 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 282428
| || || || || |||| |||||| ||||||| || ||| ||||| ||||||||||
Sbjct 1484 GCTCGTTGATGATCCTCAGAACATTCAGACCAGAGATCACTCCAGCATCCTTAGTGGCTT 1543
Query 282429 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTC 282488
| || || ||||| || ||||| || || || || || || |||| || || | || ||
Sbjct 1544 GCCTCTGAGAATCATTGAAATAAGCTGGCACTGTGATGACTGCATTTGAGACCTTTTGTC 1603
Query 282489 CAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTG 282548
| | || || ||| | | ||||||||| || | |||||| || |||| || |
Sbjct 1604 CCAGGTAGGCCTCGGCTATCTCCTTCATTTTAACCAAGACCATTGACGAGATTTCCTCGG 1663
Query 282549 GAGAATATTGCTT-GGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACA 282607
| | | | |||| || |||| || ||| || | || | || || | ||
Sbjct 1664 G-GTAGAAGGCTTTGGTTTCACCTTTATACTCCACCTGAACTTTGGGCTTTCCGTTATCA 1722
Query 282608 TTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCT 282667
| || || || || |||||| |||||| || || || || | ||||||||| | |
Sbjct 1723 TCGATCACCTTGAAAGGCCAAAGTTTCATGTCGGACTGGACGATGGAGTCATTAAACTTT 1782
Query 282668 CTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATAT 282727
|| || |||| ||| || || ||||| || |||||||| || || | || | || |
Sbjct 1783 CTTCCGATTAGTCGCTTGGCGTCAAATATTGTATTGGTGGGGTTCATGGCGACCTGGTTC 1842
Query 282728 TTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTG 282787
||||| ||||||||||| || ||||| || |||| | ||||| ||||||||
Sbjct 1843 TTGGCAGCATCTCCAATGAGCCTCTCTGTGTCGCTAAAGGCCACATAGCTGGGAGTTGTC 1902
Query 282788 CGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAA 282847
| || || || || || || || || || ||||| |||| ||| | || | || |||
Sbjct 1903 CTGTTGCCCTGGTCGTTGGCGATGATCTCCACTTTGCCATGTTGGAAAACTGCCACGCAA 1962
Query 282848 CTAAAAGTTGTTCCTAAATCAATACCAAT 282876
| | || ||||| ||||| || |||||
Sbjct 1963 GAATAGGTGGTTCCCAAATCTATGCCAAT 1991
>seq439426
Length=530
Score = 143 bits (158), Expect = 2e-28
Identities = 127/159 (80%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 282327 CTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCA 282386
|||| || ||||| | ||| || |||| || |||||||||||||| || ||||| | |
Sbjct 182 CTTGCTTCTTATCGATACCGTAAGCAAGTGCTGCAGCAGTTGGTTCGTTGATAATACGCT 241
Query 282387 AAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAA 282446
||||| |||||| ||||| | || |||||||| || ||||| | ||||||||||||||
Sbjct 242 TAACATCAAGACCTGCAATACGACCAGCATCTTTCGTTGCTTGACGTTGTGAATCGTTAA 301
Query 282447 AATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTT 282485
| || |||||||| |||||||| || || || |||||||
Sbjct 302 AGTAAGCAGGAACGGTAATAACCGCTTCAGTCACTTCTT 340
>seq340775
Length=450
Score = 120 bits (132), Expect = 2e-21
Identities = 137/182 (75%), Gaps = 4/182 (2%)
Strand=Plus/Plus
Query 282340 AAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACC 282399
|| |||||| || | || || || |||||||| || ||||| | | ||||| ||||||
Sbjct 44 AATACCATAAGCTAGTGCCGCTGCCGTTGGTTCGTTGATAATACGCTTAACATCAAGACC 103
Query 282400 AGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAAC 282459
||||| | || ||||||||||| ||||| | |||||||||||||| ||||| |||||
Sbjct 104 CGCAATACGACCAGCATCTTTAGTAGCTTGACGCTGTGAATCGTTAAAGTATGCCGGAAC 163
Query 282460 AGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTT--GCTGTTTGTTTCATT 282517
||||||||| || || || || ||| || || || ||| || |||| ||||||
Sbjct 164 AGTAATAACTGCTTCAGTAACAGCTTCACC--TAAAAAGTCTTCAGCCGTTTTCTTCATT 221
Query 282518 TT 282519
||
Sbjct 222 TT 223
Score = 87.8 bits (96), Expect = 1e-11
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 86118 ACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGC 86177
||| || || || || ||||| |||||||| || || || |||||| | ||||||
Sbjct 47 ACCATAAGCTAGTGCCGCTGCCGTTGGTTCGTTGATAATACGCTTAACATCAAGACCCGC 106
Query 86178 AATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGT 86237
||| | ||| ||| ||| ||||| | ||||| || ||||| ||||| || |||||
Sbjct 107 AATACGACCAGCATCTTTAGTAGCTTGACGCTGTGAATCGTTAAAGTATGCCGGAACAGT 166
Query 86238 AATAACTGCTTTATTAATAGGTT 86260
||||||||||| | ||| || ||
Sbjct 167 AATAACTGCTTCAGTAACAGCTT 189
>seq300954
Length=1016
Score = 118 bits (130), Expect = 8e-21
Identities = 148/202 (73%), Gaps = 11/202 (5%)
Strand=Plus/Minus
Query 282321 CTTTGTC---TTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAA 282377
||||||| || ||||| || | || || |||| |||||||| |||||||| || |
Sbjct 838 CTTTGTCGCCTTTTTTTTTTTCCATGCCGTAAGCAAGGGCAGCAGCCGTTGGTTCGTTGA 779
Query 282378 TAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTG 282437
|||| || || | ||| || || | || |||||||| || ||||| | ||||
Sbjct 778 TAAT-------ACGTTTA-ACCTGCGATACGACCAGCATCTTTCGTTGCTTGGCGCTGTG 727
Query 282438 AATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAG 282497
|||||||||| || ||||| || ||||| || || ||||| ||||||| || | ||||
Sbjct 726 AATCGTTAAAGTAAGCAGGTACGGTAATGACTGCTTCTGTCACTTCTTCACCTAGATAAT 667
Query 282498 CGCTTGCTGTTTGTTTCATTTT 282519
| |||||||| |||||||||
Sbjct 666 CTTCTGCTGTTTTTTTCATTTT 645
>seq413528
Length=500
Score = 109 bits (120), Expect = 4e-18
Identities = 113/147 (77%), Gaps = 1/147 (1%)
Strand=Plus/Plus
Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391
||||| || || ||||| |||| || ||||||||||| || || || || | || |||
Sbjct 89 TTTTTGTCCAGGCCATAAGCAATGGCTGCAGCAGTTGGCTCGTTGATGATACGCAGCACA 148
Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451
|| || |||||||| ||| ||||||||||||||||| | || || || || |||||
Sbjct 149 TTGAGCCCAGCAATGACTCCAGCATCTTTAGTGGCTTGACGCTGGGAGTCATTGAAATAA 208
Query 282452 GCAGGAACAGTAATAACGGCATCTGTT 282478
|||||||| || || || |||| ||||
Sbjct 209 GCAGGAACCGTGATGACTGCAT-TGTT 234
>seq280032
Length=493
Score = 109 bits (120), Expect = 4e-18
Identities = 113/147 (77%), Gaps = 1/147 (1%)
Strand=Plus/Minus
Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391
||||| || || ||||| |||| || ||||||||||| || || || || | || |||
Sbjct 410 TTTTTGTCCAGGCCATAAGCAATGGCTGCAGCAGTTGGCTCGTTGATGATGCGCAGCACA 351
Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451
|| || |||||||| ||| ||||||||||||||||| | || || || || |||||
Sbjct 350 TTGAGCCCAGCAATGACTCCAGCATCTTTAGTGGCTTGACGCTGGGAGTCATTGAAATAA 291
Query 282452 GCAGGAACAGTAATAACGGCATCTGTT 282478
|||||||| || || || |||| ||||
Sbjct 290 GCAGGAACCGTGATGACTGCAT-TGTT 265
>seq509470
Length=539
Score = 93.3 bits (102), Expect = 3e-13
Identities = 110/149 (74%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 131153 TTTATCAATAATAAAATAAAAATTGTAGTAGCCACAATAGCATTTGGTATGGGTATTAAT 131212
||||| || || || | |||| ||||| || || | || ||||||||||||||| ||
Sbjct 369 TTTATTAAAGATGAAGTGGAAATCGTAGTTGCGACCGTGGCTTTTGGTATGGGTATTGAT 428
Query 131213 AAACCGGATGTTAGAGTTGTTATTCATTACGGAGCTCCCAAGAATATTGAAGGTTATTAT 131272
||||| |||| | |||| | ||||| | | || ||||||||||| || |||
Sbjct 429 AAACCCAATGTACGTTTTGTGGTGCATTATGAAATACCTAAGAATATTGAGTCATACTAT 488
Query 131273 CAAGAAATTGGTAGAGCAGGTCGTGATGG 131301
||||||| ||| |||||||| || |||||
Sbjct 489 CAAGAAACTGGGAGAGCAGGACGAGATGG 517
>seq137853
Length=2661
Score = 93.3 bits (102), Expect = 3e-13
Identities = 132/186 (71%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 282690 CAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 282749
|||| | || ||||| || || | ||| | |||| |||||||||||||||||||||
Sbjct 1244 CAAAGACTGTGTTGGTGGGGTTCATGGCAACCTGATTTTTGGCTGCATCTCCAATCAGCC 1303
Query 282750 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 282809
||||| ||||| || | ||||| || || || | || || || ||||| ||||
Sbjct 1304 TCTCTGTATCTGTGAAGGCCACATAGCTGGGTGTGGTCCTGTTGCCCTGGTCATTGGCAA 1363
Query 282810 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 282869
| || ||||| || |||| || | ||||| ||||| | || ||||| | ||| |
Sbjct 1364 TGATCTCAACCTTTCCATGCTGGAACACACCAACACAGGAGTAGGTGGTTCCAAGATCGA 1423
Query 282870 TACCAA 282875
||||||
Sbjct 1424 TACCAA 1429
>seq525344
Length=259
Score = 86.0 bits (94), Expect = 5e-11
Identities = 105/141 (74%), Gaps = 7/141 (5%)
Strand=Plus/Minus
Query 86118 ACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTAT---TTTAAGAACATCTAAACC 86174
|||||| |||||||| || || |||||||| || || || ||| | |||| | |||
Sbjct 172 ACCGTAGGCAAGAGCCGCAGCTGTTGGTTCGTTGATGATACGTTTTA---CATCAAGACC 116
Query 86175 CGCAATTTTAGCAGAAT-CAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTA 86233
|||||||||| | | | | |||||||| | |||| |||||||||||| |||||||
Sbjct 115 CGCAATTTTACCCGCGTACTTTTGTTGCTTGACGTTGTGAGTCATTAAAATAAGCTGGTA 56
Query 86234 CAGTAATAACTGCTTTATTAA 86254
| || | ||| |||| | |||
Sbjct 55 CGGTTACAACCGCTTCAGTAA 35
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3714830472571452
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