Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_023693.1
Length=148612
Score E
Sequences producing significant alignments: (Bits) Value
seq508942 107 2e-18
seq513984 105 6e-18
seq309203 96.9 3e-15
seq521708 89.7 5e-13
seq518701 84.2 2e-11
>seq508942
Length=328
Score = 107 bits (118), Expect = 2e-18
Identities = 197/285 (69%), Gaps = 3/285 (1%)
Strand=Plus/Plus
Query 26507 TCACCAATAATAAACGCTTCTGCTAAACCTTTTGGGCTATCCTGTATTGCATACTGTAGG 26566
||||| | ||||||||||| || ||||| | || || ||||||| || ||
Sbjct 8 TCACCTAAAATAAACGCTTGAGCCAAACCATCAGGACTTGGTTGTATTGTGTAACTAAGC 67
Query 26567 GAAATACCAAAAGAAGAACCATCACCTAGAAGATTTACAAAATTAAT-TTGATCTTCTGG 26625
|| |||||| || |||||||||| | || |||| | | ||||||||| ||
Sbjct 68 TCAACACCAAAGCGTGAGCCATCACCTAACA-ATCGTTTAAATGATTCTTGATCTTCAGG 126
Query 26626 TGTTGTAATTATTAGTATTTCCCTAATTCCAGAAAGCATTAGGACAGAGAGTGGATAATA 26685
||| ||||| |||| ||||| | ||||| | | ||| | ||||| || || |||||
Sbjct 127 TGTAGTAATAATTAAGATTTCACGTATTCCCGCTAACATCAACACAGAAAGCGGGTAATA 186
Query 26686 AATCATAGGTTTATCGTAAATTGGTAATAGTTGTTTACTAACCCCTTTAGTAACTGGGTA 26745
|||||| || ||||| |||||||| | || || || || || |||||| || ||
Sbjct 187 AATCATTGGCTTATCATAAATTGGGAGTAACTGCTTGGATACACCCATAGTAATAGGATA 246
Query 26746 AAGCCTTGTTCCACTACCACCTGCTAAGATAATACCTTTCATACT 26790
||| | ||| || | | || || | |||||| |||||||| ||
Sbjct 247 AAGGCGTGTACC-GGAGCTCCGGCAAGGATAATTCCTTTCATGCT 290
>seq513984
Length=888
Score = 105 bits (116), Expect = 6e-18
Identities = 213/315 (68%), Gaps = 1/315 (0%)
Strand=Plus/Plus
Query 27058 CCAATATTATATGTCTCTCCAGATTTGCCTTTAGTTACTACTAGGTGTAATGCCTCTGCG 27117
|| |||||||| || || || ||| ||| | || |||||| | | ||| ||
Sbjct 328 CCGATATTATAAGTTTCACCGATTTTACCTGTCGTCACTACTTTATAGAGTGCACGAGCA 387
Query 27118 TGATCGTCAACGTATAACCAGTCTCTTACTTGAAGACCATTACCATAAACAGGGATTGGT 27177
||||| ||||| || | ||| || | | |||| ||| |||||||||| ||| | || |
Sbjct 388 TGATCTTCAACATAGAGCCAATCACGAATTTGATCACCTTTACCATAAATAGGCAATGAT 447
Query 27178 TTATGCATTAAGATATTTGTTATCGTTTTAGGTATTAGTTTT-TCTGGATGATGATATGC 27236
||| ||| ||| || | || |||| || || ||| ||| || |
Sbjct 448 TTACCTTCTAACGCATTCAGAATAACTAATGGGATTAAACTTCTCAGGAAAATGGTACGG 507
Query 27237 TCCAAAATTATTTGAACAATTTGTTATAACTGTCGGAATACCATAAGTACGATGCCACGC 27296
||| | |||||||| || || || |||| || || | ||| || || || ||||||
Sbjct 508 ACCATAGTTATTTGAGCAGTTAGTGATAATGGTTGGTAAACCGTATGTGCGTAACCACGC 567
Query 27297 TCTTACCAAATGATCGCTTGCAGCTTTAGATGCAGCATATGGACTACTTGGTTTATAAGG 27356
||| ||||||||||| |||| ||||||||||| | ||| || |||||||| |||||
Sbjct 568 TCTGACCAAATGATCACTTGATGCTTTAGATGCCGAATAAGGGCTACTTGGCGCATAAGC 627
Query 27357 ATTCTGTTCTGTAAA 27371
| | ||| |||||
Sbjct 628 AGTGCCTTCCGTAAA 642
>seq309203
Length=1072
Score = 96.9 bits (106), Expect = 3e-15
Identities = 299/456 (66%), Gaps = 9/456 (2%)
Strand=Plus/Plus
Query 75067 TAACTGGATTATTAACGGTAAAGAACCACGTCTTGCACACTATCCTCTTACAGATGATGG 75126
|||||||||||| || ||||| || || || ||| ||||||| || | | || |
Sbjct 305 TAACTGGATTATAAATGGTAAGGAGCCTGTACTGGCAAACTATCCACTCA-ACCCCATTG 363
Query 75127 CTACCCTACACACGGAGGTTTTAAGGGTAGCTTAATGACGTGGACTAACGGTAGAACAGT 75186
||||||| || || ||||| ||||||| | | | ||||||||||| ||
Sbjct 364 --ACCCTACTCATGGTGGTTTCAAGGGTATACCACTAAACTGGACTAACGGACTTACCAA 421
Query 75187 TATTCCTCATGGTGCTCCACATTGGGGAGAATACCTTGATAAAGCATGGTTTGCTTTTAA 75246
|||||| | |||||||| | ||||| || || | ||| ||| ||||||||| |
Sbjct 422 AATTCCTAAGGGTGCTCCTTACTGGGGTGAGTATTTAGATGTAGCTACCTTTGCTTTTGA 481
Query 75247 TGGTAATCTAGGATGGAACTCTGTAAACGCTACAGTATATGCTGTTAATGCAGATGGTAC 75306
|||| | || || ||||| | || || | || | ||| |||| | |||||| |
Sbjct 482 TGGTGCTTTATCATATGACTCTATCAAGGCAAGTGTTAAGGCTCTTAAACCTGATGGTTC 541
Query 75307 AACAGATTGGTCTAAGAATGGAGATCAATGGGATGTTGATTGGATCAT--TGATCGTCTA 75364
|| |||||| || |||| | | | || || |||||||| || || | | ||
Sbjct 542 TACTGATTGGGATAGTGATGGTGTAAAGTATGACGTAGATTGGATAATCCTG-TGGACTG 600
Query 75365 G-GACGTAAAGTTGATTGGGATGGAAATATCTTAGAAGAAGGTTTTCCAACATCTCAATA 75423
| ||| || || |||||||||||| || | || ||| | || | | |
Sbjct 601 GTGAC--AAGGTAGATTGGGATGGAGATGTAATATCTTCTGGTCATACAGAAGAGGAGAA 658
Query 75424 CGGAACAGTTCAACTAAAAAATACTTCTGTAAACGGTACATATAAATTTAACTACGCGAC 75483
|| || || |||||||| |||| | ||| | || | | |||| ||||||| || ||
Sbjct 659 AGGTACTGTACAACTAAAGGATACAACCGTACAAGGCATACATAAGTTTAACTTTGCCAC 718
Query 75484 TTGTAACCCTGTTGAACACGGTGGTTATTTAATGGA 75519
|||||||| | || || || || ||| | || ||
Sbjct 719 ACGTAACCCTCTAGAGCATGGCGGCTATCTTATTGA 754
>seq521708
Length=267
Score = 89.7 bits (98), Expect = 5e-13
Identities = 84/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 26678 GGATAATAAATCATAGGTTTATCGTAAATTGGTAATAGTTGTTTACTAACCCCTTTAGTA 26737
|||||||||| ||| |||||||||||||| |||||||| ||||||| |||| ||| ||
Sbjct 197 GGATAATAAACCATCGGTTTATCGTAAATGGGTAATAGCTGTTTACAAACCACTTGGGTG 138
Query 26738 ACTGGGTAAAGCCTTGTTCCACTACCACCTGCTAAGATAATACCTTT 26784
| ||||| |||| || || ||| || ||||| | ||| |||||
Sbjct 137 ATAGGGTATAGCCGAGTGCCTGAACCTCCAGCTAATAAAATGCCTTT 91
>seq518701
Length=520
Score = 84.2 bits (92), Expect = 2e-11
Identities = 155/226 (69%), Gaps = 1/226 (0%)
Strand=Plus/Minus
Query 27124 TCAACGTATAACCAGTCTCTTACTTGAAGA-CCATTACCATAAACAGGGATTGGTTTATG 27182
|| || |||| |||||| | | ||| | || ||||| |||| ||| | |||||||
Sbjct 518 TCGACATATAGCCAGTCACGAATTTGCATCGCCCTTACCGTAAATAGGCAATGGTTTACC 459
Query 27183 CATTAAGATATTTGTTATCGTTTTAGGTATTAGTTTTTCTGGATGATGATATGCTCCAAA 27242
||| |||| || || || || |||||||| ||| || || | ||| |
Sbjct 458 TTCTAATGCATTTAAAATAATTAGCGGGATCAGTTTTTCAGGAAAGTGGTAAGGACCATA 399
Query 27243 ATTATTTGAACAATTTGTTATAACTGTCGGAATACCATAAGTACGATGCCACGCTCTTAC 27302
||||||||| || || |||| | ||||| | |||||||||||| ||| || | |||
Sbjct 398 ATTATTTGAGCAGTTAGTTACGATAGTCGGTAAACCATAAGTACGTAACCAAGCACGTAC 339
Query 27303 CAAATGATCGCTTGCAGCTTTAGATGCAGCATATGGACTACTTGGT 27348
| || || |||| ||||| || || | ||| || |||||||||
Sbjct 338 TAGGTGGTCACTTGATGCTTTTGAAGCTGAATAAGGGCTACTTGGT 293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472307404674240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |