Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_023717.1
Length=151924
Score E
Sequences producing significant alignments: (Bits) Value
seq353462 129 6e-25
seq497288 118 1e-21
seq449735 116 4e-21
>seq353462
Length=332
Score = 129 bits (142), Expect = 6e-25
Identities = 210/297 (71%), Gaps = 4/297 (1%)
Strand=Plus/Plus
Query 122067 AACGCCCAAGTCTCCACCCAAGTTTCCAGGGT-GGTGTCGGATACGATCGGCAGAAGAAC 122125
|||| ||| ||||| | ||| || || || || ||| |||| | |||| || ||
Sbjct 6 AACGTCCACGTCTCAATCCATGTCTCAAGCTCAGGAATCG-ATACCAATGGCAATAGCAC 64
Query 122126 TGCGTTCGGGCCACGGCCCTGTACAGAGTCCAGAAGGATCTGATACTTCAGGTTGCTGAT 122185
|||| |||| ||| || || | |||||| || || | |||||||| ||||| |||||
Sbjct 65 CACGTTTGGGCTACGACCTTGGATAGAGTCGAGTAGCGTTTGATACTTTAGGTTACTGAT 124
Query 122186 GAAGATGTGCTTCTCGTGATCCGGA-AGATTCATGTAGTCAATTCGGTCACGGGTCACGT 122244
||||| |||| ||||| | ||| | ||| || || || || ||||| | || |
Sbjct 125 AAAGATATGCTGTTCGTG-TGAGGACAAATTGCCATAATCCATACGATCACGTGATACAT 183
Query 122245 TCACCTCTTCCGGACGCCAGAAGAATGCCAGTTGCTTTTCGATCAGCTTTTCGAACTTAG 122304
|| ||||| |||||||| ||||| | |||||||||||| |||| | || || |||
Sbjct 184 CGACTTCTTCTGGACGCCAAAAGAACGACAGTTGCTTTTCAATCAATTGCTCAAAGATAG 243
Query 122305 CGTGTTTTTGCTGGTCATAACGAGAAACGTTCGGCGTCTCACCGAGGAACATCGGCT 122361
||| ||||| ||||| ||||| | ||||| || | ||| | ||||||||||
Sbjct 244 GGTGCTTTTGTTGGTCGTAACGCGCCACGTTGACCGGATTACCAAAAAACATCGGCT 300
>seq497288
Length=389
Score = 118 bits (130), Expect = 1e-21
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 121982 CATGATGTCGTCAAAGACGATCGACGGGTCTGCCAGGATGTTGCGGATGATGTGGGTGTA 122041
||||||||| ||||||||||| | ||||| | || || || ||||| ||||| ||
Sbjct 131 CATGATGTCATCAAAGACGATAGCAGGGTCATTGATAATATTACGAATGATATGGGTATA 190
Query 122042 CGAACGAGAGTGAATAGTCTCACTGAACGCCCAAGTCTCCACCCAAGTTTCCAGGGTGGT 122101
|| |||||||| |||||| |||| ||| ||||| | ||| ||||| || |
Sbjct 191 GCTGCGCGAGTGAATGGTCTCAGAAAACGTCCACGTCTCAATCCACGTTTCAAGCTCAGG 250
Query 122102 GTCGGATACGATCGGCAGAAGAACTGCGTTCGGGCCACGGCCCTGTACAGAGTCCAGAAG 122161
|| || | ||||| || || |||| |||| ||| || || | |||||| || ||
Sbjct 251 AATAGACACCAGCGGCAATAGCACCACGTTTGGGCTACGACCTTGGATAGAGTCGAGTAG 310
Query 122162 GATCTGATACTTCAGGTTGCTGATGAAGATGTGCT 122196
| |||||||||| ||||| ||||| ||||| ||||
Sbjct 311 GGTCTGATACTTTAGGTTACTGATAAAGATATGCT 345
>seq449735
Length=3187
Score = 116 bits (128), Expect = 4e-21
Identities = 234/342 (68%), Gaps = 4/342 (1%)
Strand=Plus/Minus
Query 122022 TTGCGGATGATGTGGGTGTACGAACGAGAGTGAATAGTCTCACTGAACGCCCAAGTCTCC 122081
|| || || || || |||||||| || ||||| || ||||| |||||||| || ||
Sbjct 2151 TTACGAATAATATGCGTGTACGAGCGGCTATGAATCGTTTCACTAAACGCCCACGTTTCT 2092
Query 122082 ACCCAAGTTTCCAGGG-TGGTGTCGGATACGATCGGCAGAAGAACTGCGTTCGGGCCACG 122140
| ||| ||||| | |||| || |||| || || || || | |||| || |||
Sbjct 2091 ATCCATGTTTCTAACTCTGGTAGCG-ATACAATAGGTAGTAGGGCCACGTTTGGTGAACG 2033
Query 122141 GCCCTGTACAGAGTCCAGAAGGATCTGATACTTCAGGTTGCTGATGAAGATGTGCTTCTC 122200
|| ||||| || || | | ||||| || | ||| || | || || ||||| ||
Sbjct 2032 CCCTTGTACGCTATCAAGCAATGTTTGATATTTTAAGTTACTTAAAAATATATGCTTTTC 1973
Query 122201 GTGATCCGGAAGATTCATGTA-GTCAATTCGGTCACGGGTCACGTTCACCTCTTCCGGAC 122259
||||| || | || | || | ||| | ||||| | | |||| || ||||| || |
Sbjct 1972 ATGATCAGGTA-ATGCTTGAAAGTCTAAGCGGTCTTTGCTTACGTCTACTTCTTCTGGGC 1914
Query 122260 GCCAGAAGAATGCCAGTTGCTTTTCGATCAGCTTTTCGAACTTAGCGTGTTTTTGCTGGT 122319
|||| || || | || |||||||| || || ||||| || ||| || |||||| || |
Sbjct 1913 GCCAAAAAAACGAAAGCTGCTTTTCAATTAGTTTTTCAAAAATAGGGTATTTTTGTTGAT 1854
Query 122320 CATAACGAGAAACGTTCGGCGTCTCACCGAGGAACATCGGCT 122361
|||||||||| ||||| || | |||| ||||| ||||
Sbjct 1853 CATAACGAGATACGTTAACGGTTTGGCCGAAAAACATTGGCT 1812
Score = 82.4 bits (90), Expect = 7e-11
Identities = 191/286 (67%), Gaps = 4/286 (1%)
Strand=Plus/Minus
Query 121545 CCGATCATGGAACCATCTTTGAACAGGAAGCTGCCCCAATCCTTCTCCTGCACAGAGGCG 121604
|| ||||| || ||||||||||| | | | | |||| || || || ||| | | |||
Sbjct 2661 CCAATCATTGAGCCATCTTTGAATAAGTACTCGGCCCATTCTTTTTCTTGCTCTGCAGCG 2602
Query 121605 TCGATAAAGCCCTGTCGTGCTTCCTCGTAGCAGTCCTCCGCAACACGAGCAAA--CAGGT 121662
|| | ||| | |||||| ||| ||| | | | |||||| || | | ||
Sbjct 2601 TCCACAAACATTTTAATTGCTTCGTCGCGGCACTGCGCGGCAACAATCGCCATTTCTGGA 2542
Query 121663 CCCCTTCGTTACCATTTTGCATTTCTCTCAGCATATACTGAGTTCCTGACAAATGCAAGG 121722
| || ||||| | |||||| | | |||| |||||| || || ||||| | |
Sbjct 2541 TCG--TCTTTACCGTCTTGCATAATATTTAAAATATGCTGAGTGCCAGATAAATGTAGCG 2484
Query 121723 CTTCATCACGAGCAATTAACTCGATGATGTTGGTATTGCCCAGCATAACCCCACGCTCAC 121782
||||||| || ||||| | || ||| || || | || || ||| | ||||||||
Sbjct 2483 CTTCATCGCGGGCAATAAGCTTGATTATTTTAGCGTTACCTTCCATCAATTCACGCTCAG 2424
Query 121783 CGAAAGCGAAGGAGCAGGCAAAGCTCACGTAGAAGCGGATAGCTTC 121828
| || || || |||||||||||||| || || || || || |||||
Sbjct 2423 CAAACGCAAACGAGCAGGCAAAGCTGACATAAAAACGAATCGCTTC 2378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482836186169280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |