Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_023719.1
Length=497513
Score E
Sequences producing significant alignments: (Bits) Value
seq339348 215 2e-50
seq223647 161 3e-34
seq462036 159 1e-33
seq495280 100 9e-16
seq499446 96.9 1e-14
seq505631 86.0 2e-11
seq24926 84.2 7e-11
>seq339348
Length=849
Score = 215 bits (238), Expect = 2e-50
Identities = 430/629 (68%), Gaps = 10/629 (2%)
Strand=Plus/Minus
Query 188932 GATTACGATATCGAATTAGCGGAACGTGGAATTGTATATATCGATGAAGTAGATAAAATT 188991
||||||||| | ||| ||| ||||||| ||||| || || |||||| | |||||||||
Sbjct 812 GATTACGATGTAGAAAAAGCACAACGTGGTATTGTTTACATAGATGAAATTGATAAAATT 753
Query 188992 GCTAGAAAATCAGAAAGCACATCCATTACCCGAGATGTATCTGGCGAAGGAGTACAGCAA 189051
|| | |||||||| | | | || ||||| || |||||||| |||||||| || || |||
Sbjct 752 TCTCGTAAATCAGACAACCCGTCAATTACGCGTGATGTATCAGGCGAAGGCGTGCAACAA 693
Query 189052 GCTTTATTAAAAATCATTGAAGGTACAGTTGCGAAAGTTCCTCCTCAAGGTGGTCGTAAA 189111
|| || | ||| | || ||||| || | || ||||| || |||||||| |||||
Sbjct 692 GCACTACTTAAACTGATAGAAGGCACCATAGCTTCGGTTCCACCACAAGGTGGCCGTAAG 633
Query 189112 CACCCTCACCAAGAAATGCTTGAAATAGATACAACTAATATCTTGTTTATTCTTGGTGGA 189171
||||| || ||||| | | || ||||||| |||| |||||||||||| ||||||
Sbjct 632 CACCCACAGCAAGAGTTTTTACAAGTAGATACGTCTAAAATCTTGTTTATTTGTGGTGGC 573
Query 189172 GCGTTTGATGGTCTTGAAAACATTATCAAGAGACG-CGCTACAAAATCAAC--TTTAGGT 189228
|| || |||||||| || | || || ||| || | |||| | | | | |||
Sbjct 572 GCATTCTCAGGTCTTGATAAAGTGATTGAGCAACGTAGCCATAAAAATACCGGTATTGGT 513
Query 189229 TTTGATGATAGTGTAGATAAAGTACAAGAAGAAATCAAGGATGACAATAAAGTATTCCAA 189288
|||| || | ||| ||||| | || | | | | | | ||| ||
Sbjct 512 TTTGGTGTTGATGT---TAAAGAGTCTGCAGCGAGCCGTTCTTTAAGTGATACATTTAAA 456
Query 189289 CATCTTCAACCGCAAGATATTGTTAAGTATGGTTTAATTCCAGAATTTATTGGGCGTGTA 189348
| | | || | ||| | |||||||| || || || || || ||||| || ||| ||
Sbjct 455 GACGTAGAGCCAGAGGATTTAGTTAAGTACGGCTTGATCCCTGAGTTTATCGGCCGTTTA 396
Query 189349 CCAGTAATCGCAACTCTTAAC-AAACTTGATCGAGATGCATTGATTAACATTTTAACTGA 189407
|| ||| | || || ||||| |||||||| || |||| | || | ||||||| |||
Sbjct 395 CCGGTAGTTGCTAC-ATTAACTGAACTTGATGAAGCTGCACTAATACAAATTTTAAGTGA 337
Query 189408 GCCGCAAAACGCTATCATTAAACA-ATATCAGAAATTGTTAGATATGGATGGCGTGGAAT 189466
||| ||||||| || | |||||| | |||| |||||| | |||||| | || ||
Sbjct 336 GCCTAAAAACGCCATTACTAAACAGTTTTCAG-TATTGTTTGGTATGGAAGATGTTGAGC 278
Query 189467 TAGAATTCCAAAAAGAAGCATTAGAATCAATTGCAGATGAAGCGATTGAACGTAATACTG 189526
| || || | | || || |||| ||||||| | |||| || || ||||| || |
Sbjct 277 TTGAGTTTCGCGATGATGCCTTAGCTGCAATTGCCCACAAAGCAATGGAGCGTAAAACAG 218
Query 189527 GTGCTCGCGGATTACAATCCATTATTGAA 189555
||||||| || || | || || |||||
Sbjct 217 GTGCTCGTGGTTTGCGTTCAATCGTTGAA 189
>seq223647
Length=875
Score = 161 bits (178), Expect = 3e-34
Identities = 263/379 (69%), Gaps = 0/379 (0%)
Strand=Plus/Minus
Query 188777 TTGGCCCTACTGGTTCAGGTAAAACATTATTTGCTCAAACATTGGCTGATATGTTACATG 188836
||||||| || ||||| ||||| || || | || ||||| ||||| | | | |||
Sbjct 387 TTGGCCCAACGGGTTCTGGTAAGACCTTGCTGGCGCAAACCTTGGCGCGTCTACTGGATG 328
Query 188837 TACCTCTAGCTATCTCTGATGCAACTTCTTTAACAGAAGCTGGTTATGTAGGTGAAGATG 188896
| ||| | || || | ||||| || | || || ||||| |||||||| ||||||||||
Sbjct 327 TGCCTTTTGCGATGGCCGATGCGACGACCTTGACCGAAGCAGGTTATGTCGGTGAAGATG 268
Query 188897 TGGAAAACGTATTGCTTCGTTTAATCCAAGCAGCTGATTACGATATCGAATTAGCGGAAC 188956
| |||||| | ||| | | |||||| | ||||| ||| | ||| || |
Sbjct 267 TCGAAAACATCGTGCAAAAACTTTTGCAAGCATCAGATTATGATGTGAGCAAAGCAGAGC 208
Query 188957 GTGGAATTGTATATATCGATGAAGTAGATAAAATTGCTAGAAAATCAGAAAGCACATCCA 189016
|| || | ||||||||||| | |||||||| || ||| || | | | || |
Sbjct 207 AAGGCATCATCTATATCGATGAGATTGATAAAATCAGTAAGAAAGGCGACAACCCGTCTA 148
Query 189017 TTACCCGAGATGTATCTGGCGAAGGAGTACAGCAAGCTTTATTAAAAATCATTGAAGGTA 189076
| || || ||||| || |||||||| ||||||||||| || |||| | || |||||||
Sbjct 147 TCACGCGTGATGTGTCAGGCGAAGGCGTACAGCAAGCGTTGCTAAAGCTTATCGAAGGTA 88
Query 189077 CAGTTGCGAAAGTTCCTCCTCAAGGTGGTCGTAAACACCCTCACCAAGAAATGCTTGAAA 189136
| ||||| |||| || || ||||||||||| || || || ||||| || | ||
Sbjct 87 CGGTTGCTGCCATTCCGCCGCACGGTGGTCGTAAGCATCCACAGCAAGAGCTGATCCAAG 28
Query 189137 TAGATACAACTAATATCTT 189155
| ||||| | ||| |||||
Sbjct 27 TTGATACGAGTAACATCTT 9
>seq462036
Length=625
Score = 159 bits (176), Expect = 1e-33
Identities = 251/358 (70%), Gaps = 1/358 (0%)
Strand=Plus/Minus
Query 188834 ATGTACCTCTAGCTATCTCTGATGCAACTTCTTTAACAGAAGCTGGTTATGTAGGTGAAG 188893
|||| ||| | || || | ||||| || |||| || ||||| |||||||| |||||||
Sbjct 596 ATGTTCCTTTTGCGATGGCGGATGCCACGACTTTGACCGAAGCCGGTTATGTCGGTGAAG 537
Query 188894 ATGTGGAAAACGTATTGCTTCGTTTAATCCAAGCAGCTGATTACGATATCGAATTAGCGG 188953
| || |||||| | | | || | |||||| | ||||| ||| | |||||
Sbjct 536 ACGTTGAAAACATCGTACAGAAGCTATTACAAGCATCAGATTATGATGTTAGTAAAGCGG 477
Query 188954 AACGTGGAATTGTATATATCGATGAAGTAGATAAAATTGCTAGAAAATCAGAAAGCACAT 189013
| | || || | ||||| ||||| | |||||||| | |||| || | | | |
Sbjct 476 AGCAAGGCATCATCTATATTGATGAGATTGATAAAATCAGCAAAAAAGGTGATAAC-CTT 418
Query 189014 CCATTACCCGAGATGTATCTGGCGAAGGAGTACAGCAAGCTTTATTAAAAATCATTGAAG 189073
| || || || ||||| || || ||||| ||||||||||| || ||||| | || ||||
Sbjct 417 CTATCACGCGTGATGTGTCGGGTGAAGGCGTACAGCAAGCATTGCTAAAACTTATCGAAG 358
Query 189074 GTACAGTTGCGAAAGTTCCTCCTCAAGGTGGTCGTAAACACCCTCACCAAGAAATGCTTG 189133
|||| || ||| |||| || || ||||||||||| || || || ||||| || |
Sbjct 357 GTACGGTCGCGGCTATTCCGCCACATGGTGGTCGTAAGCATCCGCAGCAAGAGTTGATCC 298
Query 189134 AAATAGATACAACTAATATCTTGTTTATTCTTGGTGGAGCGTTTGATGGTCTTGAAAA 189191
|| | ||||| | ||||| ||| |||| |||| || ||||||| |||||||| ||
Sbjct 297 AAGTCGATACCAGCAATATTTTGATTATCGTTGGCGGTGCGTTTGCCGGTCTTGATAA 240
>seq495280
Length=603
Score = 100 bits (110), Expect = 9e-16
Identities = 220/327 (67%), Gaps = 16/327 (5%)
Strand=Plus/Plus
Query 188645 TTATTGGACAAGAAAAAGC--AAAACGTCAATTAGCTGTATCAGTTTATAATCATTATAA 188702
||||||| ||||| | || |||| || ||||||||| | ||||| |||||||||||
Sbjct 291 TTATTGGTCAAGACCATGCTAAAAAAGT--ATTAGCTGTTGCCGTTTACAATCATTATAA 348
Query 188703 GCGCATTAATGCTCTTAATGaaaaatcaaaaaatgatgatggagtaaagatcaaaaaaTC 188762
|| |||| | ||||| | | | || | || || || | |||
Sbjct 349 ACG-ATTA-----CGTAATGGTGATACTCATAACGGTGTTG------AGTTGGGTAAAAG 396
Query 188763 TAATGTTCTTTTAGTTGGCCCTACTGGTTCAGGTAAAACATTATTTGCTCAAACATTGGC 188822
|||| || | | |||| ||||||||| |||||||||||| | || || || | ||
Sbjct 397 TAATATTTTACTTATTGGGCCTACTGGTAGTGGTAAAACATTACTAGCACAGACCCTTGC 456
Query 188823 TGATATGTTACATGTACCTCTAGCTATCTCTGATGCAACTTCTTTAACAGAAGCTGGTTA 188882
| ||| |||| || | |||| |||||||||| | ||||| |||||||||||
Sbjct 457 ACGGTTATTAGATGTGCCATTTACTATGGCTGATGCAACAACATTAACTGAAGCTGGTTA 516
Query 188883 TGTAGGTGAAGATGTGGAAAACGTATTGCTTCGTTTAATCCAAGCAGCTGATTACGATAT 188942
||| ||||||||||| |||||| | | | ||| | ||| | |||||||||| |
Sbjct 517 TGTTGGTGAAGATGTTGAAAACATCATTCAGAAATTATTACAAAAATGTGATTACGATGT 576
Query 188943 CGAATTAGCGGAACGTGGAATTGTATA 188969
||| ||| | || || ||||| ||
Sbjct 577 AGAAAAAGCCCAGCGCGGTATTGTCTA 603
>seq499446
Length=572
Score = 96.9 bits (106), Expect = 1e-14
Identities = 201/297 (68%), Gaps = 2/297 (1%)
Strand=Plus/Minus
Query 189293 TTCAACCGCAAGATATTGTTAAGTATGGTTTAATTCCAGAATTTATTGGGCGTGTACCAG 189352
|| ||||||||||| | ||||| |||||||||||||| || |||||||| || |||| |
Sbjct 516 TTGAACCGCAAGATTTAGTTAAATATGGTTTAATTCCTGAGTTTATTGGTCGCTTACCTG 457
Query 189353 TAATCGCAACTCTTA-ACAAACTTGATCGAGATGCATTGATTAACATTTTAACTGAGCCG 189411
| | ||||| |||| |||| ||| |||||| | ||| | || || || ||
Sbjct 456 TTTTAGCAAC-CTTACGTGAACTCGATGAAGATGCGCTTATTCAAATATTGCAAGAACCT 398
Query 189412 CAAAACGCTATCATTAAACAATATCAGAAATTGTTAGATATGGATGGCGTGGAATTAGAA 189471
|||| || | | |||||| | | | | || |||||||| || ||||||||
Sbjct 397 AAAAATGCGTTAACTAAACAGTTTACTGCACTATTTGATATGGAAAATGTCGAATTAGAG 338
Query 189472 TTCCAAAAAGAAGCATTAGAATCAATTGCAGATGAAGCGATTGAACGTAATACTGGTGCT 189531
|| | || || ||| || | || ||| | |||| || || | || || |||||
Sbjct 337 TTTAGACCTGATGCGTTAAAAGCTATAGCACGTAAAGCTATGGATAGAAAAACAGGTGCA 278
Query 189532 CGCGGATTACAATCCATTATTGAAAATATTATGTTAGATGTAATGTATGAAGTTCCA 189588
|| || |||| || ||| ||||| | || | | ||| ||||||||| | |||
Sbjct 277 CGTGGTTTACGCTCTATTGTTGAAGCTGTTTTACTTGATACTATGTATGAATTACCA 221
>seq505631
Length=459
Score = 86.0 bits (94), Expect = 2e-11
Identities = 102/137 (74%), Gaps = 1/137 (1%)
Strand=Plus/Minus
Query 188769 TCTT-TTAGTTGGCCCTACTGGTTCAGGTAAAACATTATTTGCTCAAACATTGGCTGATA 188827
|||| ||| |||| ||||| ||| |||||||||||| | || |||| || ||
Sbjct 140 TCTTATTAATTGGTCCTACAGGTAGTGGTAAAACATTACTAGCAGAAACGTTAGCACGCT 81
Query 188828 TGTTACATGTACCTCTAGCTATCTCTGATGCAACTTCTTTAACAGAAGCTGGTTATGTAG 188887
| ||| |||| || | |||| | |||||||| | ||||| ||||| |||||||| |
Sbjct 80 TATTAGATGTGCCGTTTACTATGGCCGATGCAACCACATTAACCGAAGCGGGTTATGTGG 21
Query 188888 GTGAAGATGTGGAAAAC 188904
|||||||||| ||||||
Sbjct 20 GTGAAGATGTTGAAAAC 4
>seq24926
Length=5984
Score = 84.2 bits (92), Expect = 7e-11
Identities = 67/81 (83%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 403933 AATATTGTGCGCCTGTAGCTCAGCTGGATAGAGCACGAGCCTTCTAAGCCCGCGGTCGTA 403992
|| ||| ||||| ||||||||| |||||||||||| ||||||||||| | ||||| |
Sbjct 5753 AAGATTAAGCGCCAGTAGCTCAGTTGGATAGAGCACCCGCCTTCTAAGCGGGTGGTCGCA 5812
Query 403993 GGTTCGAATCCTACCAGGCGC 404013
|||||||||||| || || ||
Sbjct 5813 GGTTCGAATCCTGCCGGGTGC 5833
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1581192076231296
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |