Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_023736.1 Length=40411 Score E Sequences producing significant alignments: (Bits) Value seq512931 167 6e-37 >seq512931 Length=538 Score = 167 bits (184), Expect = 6e-37 Identities = 358/528 (68%), Gaps = 29/528 (5%) Strand=Plus/Plus Query 38276 CCCGACCATAGCCCCTCGGTGAAATCCGTGGGTATCACGGGGCAGCTTACCGGGTCCCGT 38335 || ||||| |||||||||||||| ||||||||| | || || | || || |||| Sbjct 10 CCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGGCGGTATGACTGGTAGCCGT 69 Query 38336 GCGGACATCATAATCGCGGATGACGTGGAGGTTCCCGGCAATAGTTCCACCCAAGGGGCA 38395 || |||||| | || ||||||||||| ||||| |||||||| | ||| || ||| Sbjct 70 GCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACACAGTCCGCA 129 Query 38396 CGGGACAAGCTGTTCGAGTTGGTGAAGGAGTTCGACGCTATCTTGAAGCCCGGTGGCTCG 38455 |||| | || |||| |||| ||||| ||||| || ||| ||||||| | || || Sbjct 130 AGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCCTGACGGTACG 189 Query 38456 GTGATCTACCTTGGCACCCCGCAGAACGAGATGTCGCTCTACAACGAACTGCTGAACCGT 38515 | |||||| | || ||||| |||| ||| ||| | ||||||| ||||| | |||| Sbjct 190 ATCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTTGAGGACCGC 249 Query 38516 GGGTACACCACGCTGATCTGGCCCGCCCGGTATCCCCGGGA------CGAC---AAG--C 38564 || ||| | ||| ||||||||| || || || || ||||| ||| || | Sbjct 250 GGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGGGATGTGGCTGACCTTGAGTCC 309 Query 38565 AGCGGGC-CAACTACGGC-AGC-----CGTCTGGCCCCGTACCTAGC----GGAGAAGTA 38613 | ||| | | | ||| ||| ||||||| || |||| || |||| | | Sbjct 310 TACTGGCACGCCAAGGGCAAGCGCTCACGTCTGG-ACCTTACCATGCTCAAGGAGCTGGA 368 Query 38614 CGACGCAGACCCGCAGGGCCTCGCATGGAAGCCCACGGACCCTGAGCGGTTCGATGAGCA 38673 ||| ||| | || || |||||||| || |||||| || |||||||| | Sbjct 369 AGAC---GACGAGAAG---CTGTTCTGGAAGCCTACAGACCCTATTCGATTCGATGATGA 422 Query 38674 GGACCTGCTGGAGCGGGAGGTGTCCTACGGCAAGGCGGGCTTCATGCTTCAGTTCATGCT 38733 ||||||| ||||| || | || || ||||||| |||||| || ||||||||||| Sbjct 423 AGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGCTCTACAGTTCATGCT 482 Query 38734 GGACACGAGCCTGTCGGATGCCGAGAAGTATCCCCTGCGCCTGCGTGA 38781 || ||| ||| || ||||||||| || || |||||||| Sbjct 483 CAACCCGAACCTTAGCGACATCGAGAAGTACCCGTTGAAGCTGCGTGA 530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128387388494652