Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_023856.1
Length=152460
Score E
Sequences producing significant alignments: (Bits) Value
seq520838 98.7 1e-15
seq513135 84.2 2e-11
>seq520838
Length=421
Score = 98.7 bits (108), Expect = 1e-15
Identities = 160/226 (71%), Gaps = 12/226 (5%)
Strand=Plus/Minus
Query 150943 TCCTGAACTCACCAAACCATTGGGATGGTGAACAAACT---GGCAACAAGCACGTCTTCT 150999
|| ||||||||||||||||||||| |||| |||||| || |||||||| | ||||
Sbjct 371 TCATGAACTCACCAAACCATTGGG---GTGATCAAACTCTTGGTAACAAGCATTTGTTCT 315
Query 151000 TCATCTTGGAAGGTTGTGCGAATCCTGAAGGTACTCGTGGTTTCTACAATGAATATCTGA 151059
|||| || || ||||||| || || ||| | | ||||| ||||||||||| | ||| |
Sbjct 314 TCATGTTAGAGGGTTGTGTTAACCCAGAACCTGCGCGTGGATTCTACAATGAGT-TCTTA 256
Query 151060 AGCCGGA---ACTGGATAAACATCGTAAGGTTTTTGAAATGTTGGGTAGTAAAATGAAAG 151116
| ||| || || | |||||||| || || ||| |||| | || |||| ||||
Sbjct 255 A--TGGATTCGTTGAATGAGCATCGTAAAGTGTTCGAAGTGTTAGCAAGCAAAACTAAAG 198
Query 151117 TACAGCCCAACGAAAACCAACTGTCTGGTCTGGGGTTCTCGACAAC 151162
|| | | | || || || |||||| || ||||| ||||
Sbjct 197 CACCATCTGATGTTAATCAGCTAAGTGGTCTTGGTTTCTCTTCAAC 152
>seq513135
Length=367
Score = 84.2 bits (92), Expect = 2e-11
Identities = 96/129 (74%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 31479 CTTCCAACACCCATCATGTCCGGCGTTCGTACCCCAACCCGCCAATTCAGTTCTTGTGTT 31538
|| |||||||| || ||||| || ||| | || || || || ||||| |||||||||||
Sbjct 239 CTACCAACACCTATTATGTCTGGGGTTAGAACACCTACACGACAATTTAGTTCTTGTGTG 298
Query 31539 CTTATCAAAACCGGTGACACTTTGGACTCAATCAATGCTACAGCCAAAAGTATTGTTGAT 31598
|||| | || |||| ||| || ||||||||||||||| || ||| ||| |
Sbjct 299 GTTATTGAGTCCAACGACAGTTTAGATTCAATCAATGCTACATGCAGCTCTATCGTTAAG 358
Query 31599 TATGTATCC 31607
|||||||||
Sbjct 359 TATGTATCC 367
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 484540119406400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |