Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_023865.1
Length=55098
Score E
Sequences producing significant alignments: (Bits) Value
seq520575 149 2e-31
seq515220 86.0 2e-12
>seq520575
Length=499
Score = 149 bits (164), Expect = 2e-31
Identities = 322/480 (67%), Gaps = 9/480 (2%)
Strand=Plus/Plus
Query 27418 TTCTGCCACAACGTAACAAGTCACAATATTATAACCTCATATGCTGAGGACGTTGTTCTG 27477
||||||||||| | | |||||||| || ||||| |||||||| |||||||||
Sbjct 14 TTCTGCCACAATGCTTCCTCCCACAATATCATCACCTCTTATGCTGATGACGTTGTTGGT 73
Query 27478 GAATCAAGC---GGCTATATCCGCACTGTGATGTTAGACCCACTCTTCCAACGAATCTTC 27534
||| ||| ||||| ||||| || | ||| || | || || | ||
Sbjct 74 GAA---AGCTCTGGCTACATCCGAACCATTATGACTAACGAGTTGTTTGGTCGGGTGTTT 130
Query 27535 CCAAATGTTCGAATTGACCCGAACAAGAGAAGCTTGGAACGTTGGGGTACGACAAAGCAA 27594
|| |||| |||||| | || | || | || ||||||||||| || ||
Sbjct 131 CCTCATGTAAAGATTGACTCCTCGAAACGGAGTCTTGAGCGTTGGGGTACAACTAAAGGC 190
Query 27595 GGTGTAATGCACGCTGTTCCAACTGGTGGTAAGATGACTGGTAAAGGTGCTGGACTTTTG 27654
|| || | ||||| ||||| |||| |||||| |||| ||||| |||||||| |||
Sbjct 191 GGCGTGCTTCACGCAGTTCCGTCTGGCGGTAAGTTGACAGGTAAGGGTGCTGGTAGCTTG 250
Query 27655 GCACCAACGTATTCTGGTTGTTTCGTCGTTGATGACGTTATTAAACCAAAAGACGCATAC 27714
| | | ||| ||||| | || | |||||| |||| || || || || ||||||
Sbjct 251 TCTACTAAGTACTCTGGCGTACTTGTGCTCGATGACATTATCAAGCCCAAGGATGCATAC 310
Query 27715 TCAGATACCGTTCGTACAGAAATCAATGACCGATATGACAACACATTCATGTCGCGCCTG 27774
|| || | |||||||| || || || || || || |||||||| | |||||||||||
Sbjct 311 TCCAATGCTGTTCGTACCGAGATTAACGATCGTTACGACAACACCCTGATGTCGCGCCTT 370
Query 27775 GCCAACGATGGTGAAAT---AACTGTTGATGGCAAGCCTGTCAAATGCCCTCGCACTCCG 27831
|| |||||||| || | || || || || | ||| || || |||| || ||
Sbjct 371 GCTAACGATGGCGAGGTGCAGGATGAAGAAGGTAACCGTGTAAAGTGTGCTCGTACACCT 430
Query 27832 ATGGTAATCATCATGCAGAGGGTTCATGATTCAGACTTAGTTGGCTATCTTCTTCGGGGC 27891
| | || || |||||| |||| ||||| ||| | || ||||| |||||||| |||
Sbjct 431 GTAGCTATTATTATGCAGCGGGTACATGACGAGGACCTTGTGGGCTACCTTCTTCGCGGC 490
>seq515220
Length=618
Score = 86.0 bits (94), Expect = 2e-12
Identities = 144/207 (70%), Gaps = 1/207 (0%)
Strand=Plus/Plus
Query 27982 AAGCAAGGATACACCCACGCTATTCCAATCTTGTTTAACCTGAATCGTGAAGCTGAGAAA 28041
|| ||||| || || ||||| | |||||| | | ||| ||||||| || |
Sbjct 116 AAACAAGGTTATACGCACGCCAAGCCAATCCTCTACAACTTGAATCGCTCAGAGTCGCCC 175
Query 28042 TCTGCTTTATGGGCATCTCGCAAAAGC-CTTGAATCACTTGAGGCAATGAAGAAAGCGAA 28100
| || || ||| | ||||| || || ||||| || | || ||||| | || |
Sbjct 176 ACAGCATTGTGGCCTTCTCGTAAGAGGTCTTGAGACATTGCAGAAGATGAAAGAGACGCA 235
Query 28101 CCCGTACACTTACAATAGCCAGTATGCTGGCGACCCAAGTGCACAAGGTCATGGGCTAAT 28160
|| || |||||||| || ||||||| ||||||||||| ||| |||| |||||| |
Sbjct 236 GCCTTATACTTACAACAGTCAGTATGATGGCGACCCAACTGCCAAAGGCACTGGGCTGCT 295
Query 28161 TAAAGAAGAGTGGTGGCAGGAATATGA 28187
| ||||||||||||||||| |||||
Sbjct 296 GGATGAAGAGTGGTGGCAGGAGTATGA 322
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 175092502675440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |