Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_024121.1
Length=167266
Score E
Sequences producing significant alignments: (Bits) Value
seq509673 129 6e-25
seq449735 89.7 5e-13
>seq509673
Length=441
Score = 129 bits (142), Expect = 6e-25
Identities = 136/179 (76%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 139725 TGCACACCGTAATCCAAGTGACGAATGCGGTTCTCTTCAACGCCTTTGTTGTTTTTCAGA 139784
|| || |||||||||| ||||| | ||||| ||||| ||||| ||| ||||||||
Sbjct 228 TGTACGCCGTAATCCATATGACGGACACGGTTGTCTTCCACGCCGCGGTTATTTTTCAGT 287
Query 139785 ACAAGCAAGTTTTCAACTTCCAAGTGCCAGATTGGATAGTACAACGTCGCTGCACCACCA 139844
|| | || |||||||| || ||||| | ||| || |||||||||||||||| |||
Sbjct 288 ACCAATAATGACTCAACTTCTAAATGCCATAATGGGTAAAACAACGTCGCTGCACCGCCA 347
Query 139845 CGAACACCACCTTGAGAACAGGATTTAACCGCAGTCTGGAAGTGTTTCCAGAAAGGAAT 139903
|| || || ||||| || ||| ||||||| ||||| ||||| |||| |||| || ||
Sbjct 348 CGGACGCCGCCTTGTGAGCAGCATTTAACAGCAGTTTGGAACAGTTTATAGAATGGGAT 406
>seq449735
Length=3187
Score = 89.7 bits (98), Expect = 5e-13
Identities = 144/205 (70%), Gaps = 8/205 (4%)
Strand=Plus/Minus
Query 138168 GGTGCTCGTCCTTGAACTGAATCAAGGAGTGTTTGATATTTCAAGTTGTTGGTGAAAAT- 138226
|||| || ||||| || |||||| | |||||||||||| ||||| | | |||||
Sbjct 2040 GGTGAACGCCCTTGTACGCTATCAAGCAATGTTTGATATTTTAAGTTACT--TAAAAATA 1983
Query 138227 ---GCCTTGATCGTTTTCAGACATTTTCTGGAATTGAACACGATCTTTGGATACGTCTAC 138283
|| || || | |||| | | || || | | || |||||| |||||||||
Sbjct 1982 TATGCTTT--TCATGATCAGGTAATGCTTGAAAGTCTAAGCGGTCTTTGCTTACGTCTAC 1925
Query 138284 TTCTTCTGGACGCCAAAAGAAGGAGAGTTGCTTTTCAGTCAACTTTTCAAATTTTTCGTG 138343
||||||||| |||||||| || || || ||||||||| | | |||||||| | ||
Sbjct 1924 TTCTTCTGGGCGCCAAAAAAACGAAAGCTGCTTTTCAATTAGTTTTTCAAAAATAGGGTA 1865
Query 138344 TTTTGGATCATCGTATCGAGCTACG 138368
|||| | | ||| || |||| ||||
Sbjct 1864 TTTTTGTTGATCATAACGAGATACG 1840
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531608096101920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |