Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_024125.2 Length=168470 Score E Sequences producing significant alignments: (Bits) Value seq449735 176 5e-39 seq506238 143 3e-29 seq487923 105 7e-18 seq351952 105 7e-18 seq511551 102 9e-17 seq509673 102 9e-17 seq326422 84.2 2e-11 >seq449735 Length=3187 Score = 176 bits (194), Expect = 5e-39 Identities = 402/594 (68%), Gaps = 17/594 (3%) Strand=Plus/Minus Query 140582 AATAGTTCACGGGCTTTAATACGCTTTTTACGAAT--ATTAGGGTCTTTTTCTGCTGCTT 140639 || |||||| |||||||| || ||||||||||| ||| | |||| ||| | | Sbjct 611 AACAGTTCAATAGCTTTAATGCGTTTTTTACGAATTGATTCG--TCTTGTTCGTATTTTA 554 Query 140640 CGTATAATTCACGG-AAACG-GTCTTGGTCTTTAAAATAAGAATAATAAAGCTCGCCACC 140697 | |||| | || |||| ||||||||||| |||| | | || ||||| ||| Sbjct 553 C--ATAAAGCGCGTCAAACTCGTCTTGGTCTTCAAAAAATGCATCGTAAAG---GCCTGG 499 Query 140698 CATTTCATGCGGACTGAACAAAGTAATGTAATCGTTCTTTCCGAATCGTTCCATCATCAA 140757 || ||| || || ||||| |||||||| |||| || || || ||| | Sbjct 498 CACATCAGAGGGGCTAAACAAGGTAATGTAGTCGTCTTTAATTAAACGCGAGTACATTAG 439 Query 140758 ATCATTCAGTTGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTT 140817 | ||| | || || || ||||| | |||||| | |||||| || || || || ||| Sbjct 438 TTTATTAAACTGTACGCCGTAATCTAAATGACGCACGCGGTTGTCATCAACCCCGCGGTT 379 Query 140818 ATTTTTCAAAACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATA--ATAAGCAGTA 140875 |||||| | || | || ||||| ||||| |||||||||| || || | ||| || Sbjct 378 ATTTTTAAGTACTAACAGGTTTTCTACTTCTAAATGCCAAAGCGGGTAGAACAAG--GTT 321 Query 140876 GCAGCGCCGCCACGAATTCCACCCTGTGAACATGATTTAACAGCAGTCTGAAAATGTTTC 140935 || ||||||||||| | || || || ||||| |||||| || || ||||| || || Sbjct 320 GCTGCGCCGCCACGTACACCGCCTTGCGAACAGCTTTTAACCGCTGTTTGAAAGTGCTTA 261 Query 140936 CAAAAAGGAATAACACCAGTATGGCGTACTTCACCCATGCCAATCTTAGAACCTTCAGCA 140995 ||||||||||| ||| |||||| |||| || ||| ||| | ||| ||| Sbjct 260 TAAAAAGGAATACAACCCGTATGGTACGCTTCGCCATTGCGAATGTGGCTACCCAGTGCA 201 Query 140996 CGAATCATACCAACGTTAATACCAATTCCAGCGCGTTTAGAGATATATTCAACAATTGAA 141055 ||||| ||| ||||||| ||||| || || |||| || | |||| |||||||| | Sbjct 200 CGAATGCGACCTGCGTTAATGCCAATGCCGGCACGTTGCGATACGTATTTAACAATTGCA 141 Query 141056 GCGGAAGCCTTATTGATAGACTTCAATG-AATCTCCTGCCTCAATAACAACACATGAACT 141114 | || | || || || |||| | || || ||| || | ||||| || || Sbjct 140 GACGAGGTGGCGTTAATTGA-ATCAAGGCTGTCGCCACACTCTATTAATACACACGAGCT 82 Query 141115 AAACTGTCGAGTCGGAGTACGGCAACCAGCCATAATAGGAGTTGGCAATGAAAT 141168 |||||| || || || ||||| ||| |||||||| || || || | |||||| Sbjct 81 AAACTGGCGTGTTGGCGTACGAACACCTGCCATAATTGGCGTAGGTAGTGAAAT 28 >seq506238 Length=275 Score = 143 bits (158), Expect = 3e-29 Identities = 142/184 (77%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 62911 ATTACAAACTCTCGGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAG 62970 ||||||| | || ||||| ||||| | | ||||| |||| ||||| || || | | Sbjct 38 ATTACAATGTTTCTGTAAATGTACGTGTTAATACGTCTTGCTGTTGTTCTGGTGTTAATG 97 Query 62971 AGTTAAAGCGAACTGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGAT 63030 ||||||| || ||||| ||||| |||||||| || || | || ||||||||||| || | Sbjct 98 AGTTAAAACGCACTGCGTAACCTGATACACGAATAGTTAATTGTGGATATTTTTCAGGGT 157 Query 63031 GCTTAACTGCATCTTCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGACCAC 63090 | ||||| |||||||||| ||||||||||| | || || ||||| | |||||||||| Sbjct 158 GTTTAACAGCATCTTCCAATGTTTCACGACGTAACACATTCACGTTTAAATGTTGACCAC 217 Query 63091 CTTC 63094 |||| Sbjct 218 CTTC 221 >seq487923 Length=1072 Score = 105 bits (116), Expect = 7e-18 Identities = 150/203 (74%), Gaps = 11/203 (5%) Strand=Plus/Minus Query 25179 ATACTAATTTATCTAATACGTATTTTTGCCATGCATAATCATTACGGAATCCGAAGACCA 25238 ||| |||||||| |||| || || |||||||| ||||||||| |||||||| || Sbjct 528 ATAGTAATTTAT---ATACATACTTATGCCATGCTAAATCATTACCAAATCCGAATACTG 472 Query 25239 CGTCATTTGAGCGCATGCTT---ACTACCGCATTGACTTTCTTATCACGAATCAGGTACT 25295 ||||| ||||||| || || | || | ||| | ||| ||||||||||| | |||| Sbjct 471 CGTCACATGAGCGC-TGATTGACAATATAG-ATTAA-TTTATTATCACGAATAAA-TACT 416 Query 25296 -GTACTGTATTAGTACACATGAAATCTGACATACCATCTTTATTGTAGTCAAACTGCATA 25354 | || |||||||||| || ||||||||||| ||| |||| | ||| || ||| Sbjct 415 TGAACATTATTAGTACAAATAAAATCTGACATTTCATTAGTATTCCATTCACTTTGAATA 356 Query 25355 GATGGACGAGTATAAATCATGAT 25377 || || | |||||||||||| || Sbjct 355 GAAGGTCTAGTATAAATCATAAT 333 >seq351952 Length=416 Score = 105 bits (116), Expect = 7e-18 Identities = 127/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 62925 GTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGAGTTAAAGCGAACT 62984 ||||||||||| | ||| || || ||| ||||| | ||| | |||||||| || ||| Sbjct 34 GTAAAGGTACGTGTGATTACATCTTGCTTTTGTTCTGCAGTTAACGAGTTAAATCGTACT 93 Query 62985 GCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATGCTTAACTGCATCT 63044 || ||||| |||||||| || || | || ||||| || || |||| | | |||||| Sbjct 94 GCGTAACCCGATACACGAATTGTTAATTGTGGATACTTATCTGGATTTTCCATTGCATCC 153 Query 63045 TCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGACCACCTTCAAT 63097 | ||||||| || || |||||||| | |||||||||||||||||| Sbjct 154 AATAACATTTCACGGTTCATTACATTAACGTTTAAGTGTTGACCACCTTCAAT 206 >seq511551 Length=634 Score = 102 bits (112), Expect = 9e-17 Identities = 202/293 (69%), Gaps = 16/293 (5%) Strand=Plus/Minus Query 44302 AGAATCTAATGCGATACGAGGAAGATTCAGTGTTACAACACCAAGATTATTACGTCCATC 44361 ||| | || ||| | |||||| || || | |||| ||||| | || ||||||||||| Sbjct 508 AGATTGTAGTGCAACACGAGGTAGGTTTAAGCTTACCACACCTAAGTTGTTACGTCCATC 449 Query 44362 AAGAATTTCATTACCAGTCGAATCTTTCCATACGCTCAA--GAAACTACGGCAACCCATC 44419 || | ||| ||||||| || ||||| |||| ||| | ||| || | ||| ||||| Sbjct 448 AAACACTTCCTTACCAGAAGAGTCTTT--ATACTCTCCAAGGAAGCTCCTGCAGCCCATG 391 Query 44420 GGAGAAACAGGAACAGATGAACCAGTGATAGCTTTATTGTTCT--TAGCTGAAATAATAT 44477 | | | || ||||| | || | | || | ||| ||| |||||| Sbjct 390 CTTGCCTTAAAACCA------CCAGTAACCTCTACAATCTTATCGTAGTTGA--TAATAT 339 Query 44478 CAGGATACATCCTTTTGCTTGCGCACTCTAGAGCAAGCTGTTTAATATCATAGTTCGGGT 44537 |||| ||||| | || || || ||||||||||| | ||||||||||| |||||| |||| Sbjct 338 CAGGGTACATACGCTTACTGGCACACTCTAGAGCTAACTGTTTAATATTATAGTTTGGGT 279 Query 44538 CGTCTT-TATAAAGATTAACACCTTCTTCAACGAACATAACAAGCTTAGGGAA 44589 | || | | ||||| || ||||| |||| || | | |||||||||||| Sbjct 278 CTTCCTGTTTAAAG-TTGACACCGTCTTTAATAGTTAGGATAAGCTTAGGGAA 227 >seq509673 Length=441 Score = 102 bits (112), Expect = 9e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 140768 TGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTTATTTTTCAAA 140827 || || || |||||||||||||| | ||||| ||||| ||||| ||||||||||| Sbjct 228 TGTACGCCGTAATCCATATGACGGACACGGTTGTCTTCCACGCCGCGGTTATTTTTCAGT 287 Query 140828 ACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCA 140887 || | | |||||||| |||||||| | || ||| | || || || |||||| Sbjct 288 ACCAATAATGACTCAACTTCTAAATGCCATAATGGGTAAAACAACGTCGCTGCACCGCCA 347 Query 140888 CGAATTCCACCCTGTGAACATGATTTAACAGCAGTCTGAAAATGTTTCCAAAAAGGAATA 140947 || | || || ||||| || ||||||||||||| || || |||| | || || ||| Sbjct 348 CGGACGCCGCCTTGTGAGCAGCATTTAACAGCAGTTTGGAACAGTTTATAGAATGGGATA 407 Query 140948 ACACCAGTATG 140958 ||| ||||| Sbjct 408 CAACCCGTATG 418 >seq326422 Length=2068 Score = 84.2 bits (92), Expect = 2e-11 Identities = 89/114 (78%), Gaps = 4/114 (4%) Strand=Plus/Plus Query 71157 CGCTCTACCAAACTGAGCTACACGA--AGTAAATTAAATTTGAGCGGATAATGAGAATCG 71214 ||||||||||| |||||||| | | | | |||| | |||||| | | |||||| Sbjct 292 CGCTCTACCAA-CTGAGCTATATCAGCATCACCATAAACTGGAGCGGGCAGCGGGAATCG 350 Query 71215 AACTCACATCATCAGATTGGAAGTCTGAGGTAAT-GCCATTATACGATATCCGC 71267 ||| | ||||||||| ||||||| |||||||||| ||||||||||||| |||| Sbjct 351 AACCCGCATCATCAGCTTGGAAGGCTGAGGTAATAGCCATTATACGATGCCCGC 404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 535435587925600