Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_024140.1
Length=72028
Score E
Sequences producing significant alignments: (Bits) Value
seq486019 354 4e-93
seq488807 205 4e-48
seq255804 187 1e-42
seq523594 91.5 7e-14
seq469180 82.4 3e-11
>seq486019
Length=823
Score = 354 bits (392), Expect = 4e-93
Identities = 577/824 (70%), Gaps = 5/824 (1%)
Strand=Plus/Plus
Query 67825 CATCCACCCACAGCCAGTCTTCGTTGTGGGAGTAAGCCCAGACACTGATCACACTGAAGT 67884
|||| ||||| | ||| || | |||| ||||||||| ||| | |||||||| |
Sbjct 1 CATCAACCCAGAACCAATCACCATTGTTATTGTAAGCCCACACAGATAAAACACTGAAAT 60
Query 67885 CACTCGCCTTCTTCGCAGAGGTAGCGAAGTCAGTGGTGATGTAGAAGTTGTACCGCTTCT 67944
| | |||| || || || |||||||| || || ||||||||| || |
Sbjct 61 CCGCAGAGGTCTTTTCACTAGTTGCAAAGTCAGTTGTTATATAGAAGTTGAACTTACCTT 120
Query 67945 TGTTGTCCAGTACGTTGCGCC-GCATGTACCAAGCCACCTCACCATCCTGGATGAGACGG 68003
| || | | ||| || | | ||||||| | |||| ||| || || |||||
Sbjct 121 TATTTTTTAATACAA-GCTCATGTCTGTACCAGTTAATATCACAATCTTGAATTAGACGA 179
Query 68004 TCTTCGTCGGACATGATCTGGAGCATAAGCTCTTGGTTGAATGTCTCGATCTTCCCTGCC 68063
|| ||||| |||||||| | | ||||||||||||||| ||||| || | ||| ||||||
Sbjct 180 TCCTCGTCTGACATGATTCGTAACATAAGCTCTTGGTTAAATGTATCCACCTTACCTGCC 239
Query 68064 TTCTTGGCCAGGGTGTACTTCTGCAACACGAAGTCGTAGGTGAATCGGTCAGCCCATGCA 68123
|| || ||||| || | || || || | || | ||| || |||| ||| |||
Sbjct 240 TTAAAAGCTTTAGTGTATTTGTCTAAAACAAATTGATATGAGAAACGATCAGGCCACGCA 299
Query 68124 CCCTTGAACTCTTCCCGTGAGCACGGGAATCTCTCGCACACAGGGTAGACGTTGACCTTC 68183
|| | || |||| | | || || || | | ||||||||||| ||||| || |
Sbjct 300 CCTCTAAAGTCTTTCTCTTCACAAGGAAAATTAGCACACACAGGGTACACGTTAACTGCC 359
Query 68184 CAGGCACCAGACTCCACTGCTTTGTACAGTGGATCCTTCGCGTTGAACGGTGTACCCGAC 68243
|| ||||||||||| ||||||||||| | |||||| || ||| || || ||||| |||
Sbjct 360 CAAGCACCAGACTCAACTGCTTTGTATAATGGATCACGCGAGTTAAAGGGAGTACCTGAC 419
Query 68244 CAGATGATCAT-GTTCTTCTTCGGGTGCAGTGCGTAGTCCACTGCCTTGTACACCGTGTC 68302
||||| | | | | | | || |||| | ||||||||| | ||||||||||| || ||
Sbjct 420 CAGATTACCTTAGAGCGTATT-GGGTCTAATGCGTAGTCAATAGCCTTGTACACTGTATC 478
Query 68303 TTCGATGGCTGCGATGACGGTTGGTGAGCGAGCATCTTCGTCCGAAACCAAGTCATCCAG 68362
||| | || | || || || | ||| | |||||||| ||||| | |||||||| ||
Sbjct 479 TTCTACAGCAGAAATAACTGTAGCTGACCTCGCATCTTCATCCGATATTAAGTCATCTAG 538
Query 68363 TACCGCAAGCTGCGGACGCTTACCCATCTCCTTCGCACCACGGACACCAGTCTTGGCACC 68422
||| |||||| ||||| ||||||||| || |||||||| ||||| ||||| || ||
Sbjct 539 TACAGCAAGCACTGGACGAACACCCATCTCTTTAGCACCACGTACACCGGTCTTTGCGCC 598
Query 68423 GTAGCCCTTGACGATGAAGACCTTCCCGTCCAGGTTCGTGAACTTCCAGCGGATATCAGT 68482
|| || || ||||| || || || || | ||| | || | |||||| ||||||||
Sbjct 599 ATAACCTTTTACGATAAATCGGTTACCATCAATGTTATTAAATTCCCAGCGTATATCAGT 658
Query 68483 GAAGTTGGTTTGAGGGATGTACTTCTTCAGGAACTCAGAGTTCTCCCAGCGGAACTCCAG 68542
||| | || | ||| | ||||| | || || ||||| ||||| ||||||||||
Sbjct 659 GAACCTAGTGT-AGGTACATACTTAAGTAAAAATTCTGAGTTTTCCCAACGGAACTCCAA 717
Query 68543 GTTCTTACGCATGTTCTTCACACCGTTGTCGATGGAGTCCGACACGTACAGAGCAAGGTC 68602
|||||||||||||||||| |||||||| || || || || || |||||||| | |
Sbjct 718 GTTCTTACGCATGTTCTTAACACCGTTCTCTATACTATCTGAAACATACAGAGCCAAGGG 777
Query 68603 TACCTTACCGAAACCAGGAAGCTCACCGTACAGTGCAATGTACA 68646
|| ||||| || || || | |||||||| || |||||||
Sbjct 778 AACTTTACCAAACCCGGGGATGTCACCGTAACAAGCTATGTACA 821
>seq488807
Length=774
Score = 205 bits (226), Expect = 4e-48
Identities = 314/444 (71%), Gaps = 8/444 (2%)
Strand=Plus/Minus
Query 67860 GCCCAGACACTGATCACACTGAAGTCACTCGCCTTCTTCGCAGAGGTAGCGAAGTCAGTG 67919
||||| ||| || || || ||||| || |||| || ||||||| || || || ||
Sbjct 440 GCCCATACAGATATTACGCTAAAGTCGCTAGCCTCTTTTTCAGAGGTTGCAAAATCCGTA 381
Query 67920 GTGATGTAGAAGTTGTACCGCTTCTTG----TTGTCCAGTACGTTGCGCCGCATGTACCA 67975
|||||||||||||||||| || |||| || ||| | || || || ||||||
Sbjct 380 GTGATGTAGAAGTTGTAC-GCGTCTTTACTCTTAAGAAGTGCATTACGT-GC--GTACCA 325
Query 67976 AGCCACCTCACCATCCTGGATGAGACGGTCTTCGTCGGACATGATCTGGAGCATAAGCTC 68035
| | ||||| ||| | || | | |||||| || ||||| || ||||| | |||
Sbjct 324 ATTAATCTCACTATCTTTAATTAATCTGTCTTCTTCTGACATAATTCTTAGCATCAACTC 265
Query 68036 TTGGTTGAATGTCTCGATCTTCCCTGCCTTCTTGGCCAGGGTGTACTTCTGCAACACGAA 68095
|||||| || | || | ||| ||||| || || |||||| | || || || |
Sbjct 264 TTGGTTAAAAGAATCCACCTTACCTGCTTTAACAGCTTTGGTGTATTGCTTCATTACATA 205
Query 68096 GTCGTAGGTGAATCGGTCAGCCCATGCACCCTTGAACTCTTCCCGTGAGCACGGGAATCT 68155
||| || ||||| || |||| ||||| || ||||||||||| | | || || ||| |
Sbjct 204 GTCATACGTGAAGCGATCAGGCCATGAGCCTTTGAACTCTTCTCTCGTACAAGGAAATTT 145
Query 68156 CTCGCACACAGGGTAGACGTTGACCTTCCAGGCACCAGACTCCACTGCTTTGTACAGTGG 68215
||| ||||||||||| || || || | ||| || || ||||| ||||||||||||| |||
Sbjct 144 CTCACACACAGGGTACACATTTACGTACCAAGCTCCTGACTCAACTGCTTTGTACAATGG 85
Query 68216 ATCCTTCGCGTTGAACGGTGTACCCGACCAGATGATCATGTTCTTCTTCGGGTGCAGTGC 68275
|| ||||| ||||| ||||| |||||||| || | ||| | || |||| |||
Sbjct 84 GTCACGGGCGTTAAACGGAGTACCTGACCAGATTATTTTAGACTTGGTAGGATGCAATGC 25
Query 68276 GTAGTCCACTGCCTTGTACACCGT 68299
||| |||||||| || || || ||
Sbjct 24 GTAATCCACTGCTTTATAAACTGT 1
>seq255804
Length=3791
Score = 187 bits (206), Expect = 1e-42
Identities = 476/719 (66%), Gaps = 13/719 (2%)
Strand=Plus/Plus
Query 68116 CCCATGCACCCTTGAACTCTTCCCGTGAGCACGGGAATCTCTCGCACACAGGGTAGACGT 68175
||||||| || || |||||||| | | || || || |||| || | ||| || ||
Sbjct 2268 CCCATGCTCCTTTAAACTCTTCTCTAGTACAAGGAAACTTCTCACATATAGGATATACAC 2327
Query 68176 TGACCTTCCAGGCACCAGACTCCACTGCTTTGTACAGTGGATCCTTCGCGTTGAACGGTG 68235
| || | ||| |||||||| |||| |||| |||| ||||| || || || || || |
Sbjct 2328 TTACATCCCATGCACCAGATTCCATAGCTTCATACAAAGGATCATTAGCATTAAAGGGAG 2387
Query 68236 TACCCGACCAGATGATCATGTTCTTCTTCGGGTGCAGTGCGTAGTCCACTGCCTTGTACA 68295
|||| ||| || || | |||||| ||||| ||||| || | | |||| |
Sbjct 2388 TACCAAGCCATATAGTCTTAGACTTCTTAGGGTGAAGTGCATACTTAATAGCCTGACCTA 2447
Query 68296 CCGTGTCTTCGATGGCTGCGATGACGGTTGGTGAGCGAGCATCTTCGTCCGAAACCAAGT 68355
| ||||||| || ||| || || || ||||| || | || || | ||| ||||
Sbjct 2448 CTGTGTCTTTAATAGCTTGAATAACTGTAGGTGAACGTGAGTCATCATTACTAACTAAGT 2507
Query 68356 CATCCAGTACCGCAAGCTGCGGACGCTTACCCATCTCCTTCGCACCACGGACACCAGTCT 68415
|||| || | || | ||| || || |||||||||||||| ||||||| | ||| ||||
Sbjct 2508 CATCTAGGATAGCCATCTGTGGGCGTGTACCCATCTCCTTCACACCACGAATACCTGTCT 2567
Query 68416 TGGCACCGTAGCCCTTGACGATGAAGACCTTCCCGTCCAGGTTCGTGAACTTCCAGCGGA 68475
||||||| || ||||| || | ||| | || | | ||| | |||| ||| | |
Sbjct 2568 TGGCACCATACCCCTTTACTACGAATTTAGTACCATTAATATTCTTAAACTCCCACCTAA 2627
Query 68476 TATCAGTGAAGTT------GGTTTGAGGGATGTACTTCTTCAGGAACTCAGAGTTCTCCC 68529
|||| |||| || || ||| | ||||||| | ||||||| ||||||
Sbjct 2628 TATCTGTGAGCTTTAATCCTTCTTTAGGTAGATACTTCTGTAAGAACTCACTACTCTCCC 2687
Query 68530 AGCGGAACTCCAGGTTCTTACGCATGTTCTTCACACCGTTGTCGATGGAGTCCGACACGT 68589
| || |||| | |||||| | ||| ||| | |||||| || || || || || |
Sbjct 2688 AACGAGACTCTAAGTTCTTTCTCATTGACTTAATACCGTTATCAATACTATCTGATACAT 2747
Query 68590 ACAGAGCAAGGTCTACCTTACCGAAACCAGGAAGCTCACCGTACAGTGC-AATGTACAGG 68648
|||| | | | |||||||| || || | ||||||| || || || | |
Sbjct 2748 ACAGCACTAATTTAACCTTACCAAAGGACGGCATTCTGCCGTACACCGCTAAGATATAAG 2807
Query 68649 AACAGGTACTCACCCATCACGGTAGTCTTGGCCGCACCACGGAACACCATGTTGGCGATC 68708
| ||||||||| |||| | |||||||| | |||||||| || | |||||| || |
Sbjct 2808 ATAAGGTACTCAGCCATTAGTGTAGTCTTACCTGCACCACGAAAGATCATGTTAGC--TA 2865
Query 68709 CGAGTCT--GGCCAGAGCCAATCTGGTCAAGCATCCGTAGGTGAAGCACTGGTGTCTTGT 68766
|| ||| ||| | | || || | |||| || ||||| || |||| ||
Sbjct 2866 CGTTTCTTAATCCACCATCTAACTTATCTAACATCTTTAAGTGAATAACAGGTGATACGT 2925
Query 68767 TCTCTTCCCCTTCGTTACCGTTGACCATCTTGATGAA-GTCAACGAACTGCAAGGCAAA 68824
|||| || || || ||| || || | ||| || || ||||| ||||| ||| |||||
Sbjct 2926 TCTCCTCACCCTCACCACCATTAACTAGCTTAATAAACGTCAA-GAACTCCAATGCAAA 2983
>seq523594
Length=514
Score = 91.5 bits (100), Expect = 7e-14
Identities = 70/83 (84%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 34275 ATCCAAAAGCGATCTACGTTGAAGCCAGCTTCGACAGTGCGTCCGTCATTGTACACACCG 34334
||||| ||||| || |||| ||| || ||||| |||||||| || || ||||||||||||
Sbjct 512 ATCCAGAAGCGGTCCACGTCGAAACCGGCTTCTACAGTGCGACCATCGTTGTACACACCG 453
Query 34335 AAGCCACCAACCAAACCATTCAC 34357
|| ||||||| ||||||||| ||
Sbjct 452 AAACCACCAATCAAACCATTGAC 430
>seq469180
Length=838
Score = 82.4 bits (90), Expect = 3e-11
Identities = 255/391 (65%), Gaps = 3/391 (1%)
Strand=Plus/Minus
Query 64114 AGCTTCAAATCGAAGTTGCCAGCAAGGTCATCCCTGCGGATGTCCACGAAGTGCTCATTC 64173
||||| | ||| ||||| |||||||||||||| | || ||||| | || |
Sbjct 404 AGCTTAACATCAAAGTTACCAGCAAGGTCATCACGTTTAATAGTAACGAACTCTTCGTCA 345
Query 64174 GTGATCCTCACCACTTCCACATCGTCCAGGAACTCAGCGTTCATGGCTATGATCTTCCGC 64233
|| || | | ||||| | || || | |||| |||||||| ||| ||||| ||
Sbjct 344 GTAATTCGTATAACTTCTTCTTCTTCTAAGAACAAGGCGTTCATACTTATAATCTTACGG 285
Query 64234 CCGATCTCGATGATGCCAGCCGAGAGACGGCGAAGGATTCCAAGCTCACGCTTCGATGCA 64293
|| ||||| ||||| || | | || | ||| || | |||||| || || |||
Sbjct 284 CCAATCTCTTCAATGCCTGCACCTAT-CTACGTAAGATACCTATCTCACGTTTAGAAGCA 226
Query 64294 GCATCCAATGCACCACGTACAGCAGTAGCGGTGTCACCGAGTGCAGCACCAGAGATGCCA 64353
| |||| ||||||||| || | | | || ||||| | |||| ||||| | |||
Sbjct 225 GAGTCCATTGCACCACGAGCATTACCAACAGTATCACCAAATGCATCACCACTTACACCA 166
Query 64354 GCGTTGAAAGCCTTCACACCAGTCATGGATTCAGCTTCTGCCTGTTGCAGGTTGATCATG 64413
| | || || || | ||| || | ||||||||||| ||||||| | | |||
Sbjct 165 GTACTAAATGCTTTGATACCTGTTAATGATTCAGCTTCATTGTGTTGCATACTAAGCAT- 107
Query 64414 TAC-TGAGCGGACTGCGGGATCTCTGGGAAGGTGTGCATGTGCACAGCAGCCCGTGGGTC 64472
||| |||| ||||| | | ||| || | | ||||||| | || | ||| ||
Sbjct 106 TACAGGAGCTGACTGTGAAAGCTCAGGATACTTATGCATGTAAAATGCTTTACTTGGATC 47
Query 64473 TGCACCTGGGTTGAACTCGTAGTTCTCACCC 64503
|||| |||| ||||||||| ||||||
Sbjct 46 AACACCACCGTTGTACTCGTAGTCATCACCC 16
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 228889415824358
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