Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_024362.1
Length=40472
Score E
Sequences producing significant alignments: (Bits) Value
seq512931 374 2e-99
seq524349 174 4e-39
seq521066 158 3e-34
seq500082 152 1e-32
>seq512931
Length=538
Score = 374 bits (414), Expect = 2e-99
Identities = 403/530 (76%), Gaps = 20/530 (4%)
Strand=Plus/Plus
Query 38361 CCTGACCACTCGCCCTCTGTGAAGTCTGTAGGTATCACCGGTCAGT-TGACTGGTAGCCG 38419
||||||||| ||||| |||||||| || ||| | || || | || |||||||||||||
Sbjct 10 CCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGG-CGGTATGACTGGTAGCCG 68
Query 38420 TGCTGACATCCTCATTGCGGACGACGTTGAGGTTCCCAACAACTCTGCCACTCAGACCGC 38479
||||||||||||||||||||| ||||||||||| ||| |||||||| ||| ||| ||||
Sbjct 69 TGCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACACAGTCCGC 128
Query 38480 CCGAGATCACCTCGGAGAACTGGTGAAGGAGTTCGATGCGATCCTGAAGCCGGGTGGTAC 38539
| |||||||| || || ||||| ||||| |||||||||||||||||||| | |||||
Sbjct 129 AAGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCCTGACGGTAC 188
Query 38540 GATCATCTATCTGGGCACCCCTCAGACCGAGATGACCCTCTACCGCGAGCTGGAAGGCCG 38599
||||||||| |||| ||||| |||||||| |||||||||||| | || || || | |||
Sbjct 189 GATCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTTGAGGACCG 248
Query 38600 TGGATACGTCACAACGATCTGGCCTGCGAGATACCCTAAAGACCAAGCTGACTGGGACTC 38659
|| ||| || |||||||||||||| |||||||| || |||||| || ||
Sbjct 249 CGGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGGGATGTGGCTGACCTTGAGTC 308
Query 38660 CTAC-----GGCCCACGGCTGGCTCCTATG-CTGG--------CTGCT----GAGCTACA 38701
|||| ||| | ||| || | | | |||| |||| ||||| |
Sbjct 309 CTACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACCTTACCATGCTCAAGGAGCTGGA 368
Query 38702 GGCAGATGGTTCCCTGTTCTGGGCACCTACTGACGAGGTTCGCTTCGATGACAAGGACCT 38761
| || | ||||||||| ||||| ||| |||| |||||||| | |||||
Sbjct 369 AGACGACGAGAAGCTGTTCTGGAAGCCTACAGACCCTATTCGATTCGATGATGAAGACCT 428
Query 38762 GCGTGAGCGGGAACTGTCCTACGGCAAGGGTGGCTTCGCACTTCAGTTCATGCTCAACCC 38821
||||||||| ||||| || || ||||||||||||||||| || |||||||||||||||||
Sbjct 429 GCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGCTCTACAGTTCATGCTCAACCC 488
Query 38822 GAACCTCTCCGACATGGAGAAGTACCCTCTCAAGCTGCGTGACTTCATCG 38871
|||||| |||||| ||||||||||| | ||||||||||| | ||||
Sbjct 489 GAACCTTAGCGACATCGAGAAGTACCCGTTGAAGCTGCGTGATTGGATCG 538
>seq524349
Length=315
Score = 174 bits (192), Expect = 4e-39
Identities = 198/266 (74%), Gaps = 0/266 (0%)
Strand=Plus/Plus
Query 13717 TGGAATGCCCAGCCGTTCGTGCCCGATGGGGTCGTCTCTGCGAAGTCCCTAAAGGCCCGC 13776
||||| |||||| || ||| || ||||| || ||||| ||||||| ||| |||| ||||
Sbjct 10 TGGAACGCCCAGAAGTACGTCCCTGATGGTGTGGTCTCGGCGAAGTACCTTAAGGGCCGC 69
Query 13777 TTGAAGGAGAAGAAGGTGATCCCTTCGCTCCCTCTGGTGGCCCCTCACGAACTCAAGAAG 13836
| || || |||||||| ||| ||||| | ||| |||||| |||||||| ||
Sbjct 70 ATCAAAGAAAAGAAGGTTATCACTTCGATGCCTTTGGTGGGACCTCACGAGCTGTCCCGC 129
Query 13837 ATGACCAAGGACTGCCGTGGTGGTGAGGTGATCCTCGTGACCTCTGGCAGTGGCTCGGGC 13896
||||||||| || ||| | || || || || || || ||||| ||| |||||||||
Sbjct 130 ATGACCAAGAACATCCGCGAAGGCGAAGTCATTCTGGTCACCTCGGGCTCCGGCTCGGGC 189
Query 13897 AAGTCCACCTTCGTGCGTCAGAACGTCTACAACCTGTTCCACAACGAGTCCATTCCATGT 13956
|||||||| ||||| || |||||| ||||||| | ||||| | | | | || ||
Sbjct 190 AAGTCCACGTTCGTCCGACAGAACACCTACAACGTCTTCCATGAGGCGACGATCCCGGTG 249
Query 13957 GGCGTTGCCATGCTGGAGGAAGCCGT 13982
|||||||| ||||| |||||| ||||
Sbjct 250 GGCGTTGCGATGCTTGAGGAATCCGT 275
>seq521066
Length=280
Score = 158 bits (174), Expect = 3e-34
Identities = 174/231 (75%), Gaps = 3/231 (1%)
Strand=Plus/Plus
Query 20825 CATGGAAGCCAACAGCTACCGAGTGACGCTCTTTGAGTTGATCCGTCAGTTGGCCCTTGC 20884
||||||||||||||| ||||| ||| | ||| |||| |||||||||| | ||
Sbjct 1 CATGGAAGCCAACAGTTACCGCACCACGTTGCACGAGCTGATTCGTCAGTTGGTGATCGC 60
Query 20885 AGGCACCGCTCTGATCTACCTACCACCACCTGACGCATCGTCCAATTCGTACAACCCGAT 20944
|| | | ||| | ||||| || || ||||| | ||| || | | | ||| ||
Sbjct 61 TGGGTCTGGCCTGCTGTACCTTCCGCCTCCTGAGGGTTCGACCCAAGGG---AGCCCTAT 117
Query 20945 GAAGCTCTACACGCTCCACAACCATGTGGTCCAGCGTGATGCCTTCGGGAACGTCTTGCA 21004
||||||||||||||| |||||||| || ||||| || || |||||||||||||| | ||
Sbjct 118 GAAGCTCTACACGCTGCACAACCACGTAGTCCAACGGGACTCCTTCGGGAACGTCCTACA 177
Query 21005 GATTGTGACGCTCGACAAGGTGGCCTATGCGGCACTCCCAGAGGACGTTCG 21055
||| || ||||||||||||||||||| |||||| || || || ||||| ||
Sbjct 178 GATCGTTACGCTCGACAAGGTGGCCTTTGCGGCCCTTCCTGAAGACGTGCG 228
>seq500082
Length=313
Score = 152 bits (168), Expect = 1e-32
Identities = 204/284 (72%), Gaps = 0/284 (0%)
Strand=Plus/Minus
Query 5657 TGGCTGATGATCCACGGTGCGAACTGTGCCGGGGTCGATAAGGTTGACTTCAGCCAGCGC 5716
||||| ||||| ||||| || ||| ||| |||||||||||||| ||| || |||
Sbjct 297 TGGCTCATGATTCACGGGGCCAACACTGCTGGGGTCGATAAGGTCCCTTTCGATCAACGC 238
Query 5717 AAGCAGTGGATCAAGGACAACGAGGAAATGATTCTTCGCTGTGCCCACGACCCGCTCATC 5776
||||| ||| | ||||| || | || || || || || | ||||||||||
Sbjct 237 AAGCAATGGGTTCGTGACAATGAATCGACTATCCTCCGATGCGCTGAAGACCCGCTCACT 178
Query 5777 AACACCGACTGGATGGACATGGATTCGCCCTTCTGCTTCTTGGCGTTCTGCTTCGAGTGG 5836
||||||| ||||||| ||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 177 CACACCGAGTGGATGGGGATGGACTCGCCCTTCTGTTTCTTGGCGTTCTGCTTCGAGTGG 118
Query 5837 CAAGGTGTGAAGCTCCACGGGGAAGCCCATGTGTCTGCCCTGCCGATTGCCTTCGACGGT 5896
||||| | | | || | || || || || || || || || || |||||
Sbjct 117 GCCGGTGTCGTTCGCGATGGAGCTGCACACCGATCCGCTCTACCAATCGCTTTTGACGGA 58
Query 5897 TCTTGCTCGGGCATTCAGCACTTCTCTGCGATGCTCCGTGATGA 5940
|| ||||| || ||||| || ||||| |||||||| || ||
Sbjct 57 AGCTGTTCGGGTATCCAGCATTTTTCTGCCATGCTCCGGGACGA 14
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 128581370381016
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