Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_024379.1 Length=39093 Score E Sequences producing significant alignments: (Bits) Value seq512931 239 1e-58 >seq512931 Length=538 Score = 239 bits (264), Expect = 1e-58 Identities = 371/528 (70%), Gaps = 29/528 (5%) Strand=Plus/Plus Query 37135 CCAGACCACTCACCTTCGGTTAAGTCTGTTGGTATCACTGGTCAGT-TGACTGGTAGTCG 37193 || |||||| || ||||| ||||| || ||| | ||||| | || |||||||||| || Sbjct 10 CCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGG-CGGTATGACTGGTAGCCG 68 Query 37194 TGCTGACATCCTGATTGCCGATGACGTAGAGGTTCCGAACAACTCAGCGACTCAGGCCGC 37253 |||||||||||| ||||| |||||||| ||||| || |||||| | || ||| |||| Sbjct 69 TGCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACACAGTCCGC 128 Query 37254 ACGAGACCGTCTGTCAGAGCTTGTGAAAGAGTTCGACGCTATCCTGAAGCCGGGAGGTAC 37313 | | || | || ||||| || || || ||||| || ||||||||||| | ||||| Sbjct 129 AAGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCCTGACGGTAC 188 Query 37314 AATCATCTATCTGGGTACTCCTCAGAACGAGATGACCCTGTATCGTGAGCTGGAAGGTCG 37373 |||||||| |||| || || |||| ||| |||||||| || | || || || | || Sbjct 189 GATCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTTGAGGACCG 248 Query 37374 TGGGTATACCACTACTATCTGGCCCGCTCGTTATCCACGCGATAAGAATG---------- 37423 || || | || || |||||||| || || || || || ||| | || Sbjct 249 CGGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGGGATGTGGCTGACCTTGAGTC 308 Query 37424 --ACTGGCAGTCTTACGGCGA------CCGTCTGG---CTCCTATGCTTCAGGCAGAGCT 37472 ||||||| | | ||| | ||||||| | | ||||| || ||||| Sbjct 309 CTACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACCTTACCATGCTCAAG---GAGCT 365 Query 37473 GGAAGAGGACCCTGAGTCATTCTACTGGCGTCCGACCGACGAAGTACGCTTCGATGATAC 37532 |||||| ||| ||| | | |||| || || ||| | || ||||||||| Sbjct 366 GGAAGACGAC---GAGAAGCTGTTCTGGAAGCCTACAGACCCTATTCGATTCGATGATGA 422 Query 37533 GGACCTGAAGGAACGTGAGCTGTCATATGGCAAGGCTGGCTTCGCTCTACAGTTCATGCT 37592 |||||| || || || || ||||||||||||| |||||||||||||||||||||||| Sbjct 423 AGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGCTCTACAGTTCATGCT 482 Query 37593 TAACCCGAACCTGAGTGATGCTGAGAAGTACCCTCTAAAGCTCCGTGA 37640 ||||||||||| || || ||||||||||| | ||||| ||||| Sbjct 483 CAACCCGAACCTTAGCGACATCGAGAAGTACCCGTTGAAGCTGCGTGA 530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124196107736820