Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq152719 179 7e-40
seq152718 147 4e-30
seq59938 98.7 2e-15
>seq152719
Length=2073
Score = 179 bits (198), Expect = 7e-40
Identities = 177/229 (77%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
||||||||||||| ||||| || | || | || ||||||||||| || |||||||| |
Sbjct 498 TACCTCCTCTCAAGCGCAGCACAAGATGGATGGTGGATTCTTTCTGGATGTTATAATCTG 557
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | | | ||| ||||| || || || || |||||||| || || || ||||| ||||
Sbjct 558 ACATGGTGCGACCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCAGGAG 617
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || || |||||||| || ||||| ||||||||||| ||||| || || | ||||| |
Sbjct 618 GGATGCCCTCCTTATCCTGGATCTTAGCTTTTACATTCTCAATGGTGTCGCTGGGTTCAA 677
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| |||| ||| || ||||| || |||| ||||| ||||| ||||||||
Sbjct 678 CCTCCAGAGTGATAGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 726
Score = 161 bits (178), Expect = 2e-34
Identities = 173/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||||||||||| || || || | || || || || |||||||| || || || || |
Sbjct 42 TACCTCCTCTCAGGCGGAGCACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGG 101
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| ||| | | |||||||| || || || || |||||||| || || || ||||| ||||
Sbjct 102 AGAGAGTGCGGCCGTCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCAGGAG 161
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || || |||||||| || ||||| ||||| ||||| ||||| || || | ||||| |
Sbjct 162 GGATGCCCTCCTTATCCTGGATCTTAGCTTTGACATTCTCAATGGTGTCGCTGGGTTCAA 221
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| |||| ||| || | ||| || |||| ||||| ||||| ||||||||
Sbjct 222 CCTCCAGAGTGATGGACTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 270
Score = 158 bits (174), Expect = 2e-33
Identities = 175/233 (75%), Gaps = 8/233 (3%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAAC----TAAGTGCAGAGTAGATTCTTTCTGTATATTATAA 82637
|||||||||||| |||| || | | ||||| || |||||||| || || ||
Sbjct 270 TACCTCCTCTCAGCCGCAAGACCAGATGAATGCAG----GACTCTTTCTGGATGTTGTAG 325
Query 82638 TCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCT 82697
|| || ||| | | |||||||| || || || || |||||||| || || || || |||
Sbjct 326 TCGGAGAGAGTGCGGCCGTCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCT 385
Query 82698 GGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT 82757
||||| || ||||||||||| || ||||| ||||| ||||| ||||| || || || |||
Sbjct 386 GGAGGGATGCCTTCCTTATCCTGGATCTTAGCTTTGACATTCTCAATGGTGTCGTTGGGT 445
Query 82758 TCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || ||| ||| || ||||||||||| | ||||| ||||| ||||| ||
Sbjct 446 TCAACCACCAGAGTGATAGTCTTGCCTGTGAGGGTCTTCACAAAGATCTGAAT 498
>seq152718
Length=3078
Score = 147 bits (162), Expect = 4e-30
Identities = 170/229 (74%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||||| ||||| |||| || | || || || || |||||||| || | || || |
Sbjct 2145 TACCTCTTCTCAGCCGCAAGACAAGATGGAGGGTGGACTCTTTCTGGATGCTGTAGTCGG 2204
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| ||| | | ||| ||||| || || || || |||||||| || || | || || | ||
Sbjct 2205 AGAGAGTGCGACCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTGTACTGTTCAGAAG 2264
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || ||||||||||| |||||||| |||| ||||| ||||| || || | ||||| |
Sbjct 2265 GGATGCCTTCCTTATCCTGAATCTTAACTTTGACATTCTCAATGGTGTCGCTGGGTTCAA 2324
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| |||| ||| || ||||| || |||| ||||| ||||| ||||||||
Sbjct 2325 CCTCCAGAGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 2373
Score = 147 bits (162), Expect = 4e-30
Identities = 170/229 (74%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||||||||||| |||| || | || || ||||| |||||||| || | || || |
Sbjct 2373 TACCTCCTCTCAGCCGCAAGACCAGATGGAGGGTAGACTCTTTCTGGATGCTGTATTCGG 2432
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| ||| | | | |||||| || | || || ||||| | || || || || |||| ||
Sbjct 2433 AGAGAGTGCGGCTGTCTTCCAGCAGCTTGCCGCCAAAGTTGAGCCTCTGCTGGTCTGTAG 2492
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| | ||||||||||||||| ||||| ||||| | ||| ||||| || ||| | ||||| |
Sbjct 2493 GGAATCCTTCCTTATCTTGGATCTTGGCTTTGAAATTATCAATGGTGTCACTGGGTTCAA 2552
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| |||| || ||| ||||| ||||| | ||||| ||||| ||||| ||
Sbjct 2553 CCTCCAGAGCTATAGTCTTCCCTGTGAGGGTCTTCACAAAGATCTGAAT 2601
Score = 86.0 bits (94), Expect = 1e-11
Identities = 155/227 (68%), Gaps = 6/227 (3%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|||||||||| || || || | || || || || || |||| || |||||||||||
Sbjct 2603 CCTCCTCTCAGGCGGAGCACAAGATGGAGGGTGGAGTCCCTCTGAATGTTATAATCAGAC 2662
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
| | ||| ||||| || || | || |||||| || || || ||||| |||||
Sbjct 2663 ATGGTGTGACCATCTTCCAGCTGCCTGCCGCAAAAGATCAGCCTCTGCTGATCAGGAGGG 2722
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|||||| |||| || ||||| ||||| |||| |||| || | ||||| ||
Sbjct 2723 TAGCCTTCCCTATCCTGGATCTTAGCTTTGACATACTCAACGGTGCTGCTGGGTTCAACA 2782
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||| ||| || |||| | | ||| | ||||| ||||||||
Sbjct 2783 TCCAGAGTGATAGTCT------TAATAGTCCTCACAAAGATCTGCAT 2823
>seq59938
Length=2926
Score = 98.7 bits (108), Expect = 2e-15
Identities = 152/216 (70%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642
||| || |||| | |||| || | | || || || || ||||| || || || |||
Sbjct 2711 ACCACCCCTCAGATGCAGGACCAGACGGAGGGTGGACTCCTTCTGGATGTTGTAT--AGA 2768
Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702
|| | | || ||||| || || || |||||||| || || || |||||||| ||
Sbjct 2769 GAGGGTGCGGCCATCTTCCGAATGCTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGG 2828
Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
|| |||||||| || || ||||| || || ||||||||||| || || | || || ||
Sbjct 2829 AATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTTTCAATGGTGTCGCTGGGCTCAAC 2888
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTAC 82798
|||| || || |||||||| || | ||||| ||
Sbjct 2889 CTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTGAC 2924
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 975216562985178
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