Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq44246 298 5e-76
seq152719 120 3e-22
seq152718 105 6e-18
seq6427 104 2e-17
seq103378 100 3e-16
seq59939 96.9 3e-15
seq59938 93.3 4e-14
>seq44246
Length=4029
Score = 298 bits (330), Expect = 5e-76
Identities = 992/1525 (65%), Gaps = 35/1525 (2%)
Strand=Plus/Minus
Query 148237 TCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCA 148296
||||||| | || ||||| | || || | ||| ||||| || | || || || ||
Sbjct 1785 TCAGGTCCTTGAGCAGATGGGGGTTGACGATCTGGAACTCTCCTGACAGGACCCGGCGGG 1726
Query 148297 GATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCG 148356
|| | |||||| || | | || | |||||||||||||||| ||||| ||||| |
Sbjct 1725 TGTAGATGTTGCTGGTGTAGGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGG 1666
Query 148357 TTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGC 148416
||||||||||| || | |||||| ||| | || ||| | || || ||
Sbjct 1665 AGGCCGTGGGCATCGGGGCCAGCAGCAGGCTGTTCCTCACGCCGTGCTTGGCGATCTTCT 1606
Query 148417 GCTTCAGAGCCGCCCAGTCCCAGAG--CGGCGACGGTGTCACGTTCCACATGTCGTACTG 148474
|||||| | ||||||||| || ||| | || ||| | |||||||||||||||
Sbjct 1605 CCTTCAGCAGCTTCCAGTCCCACAGGTCGGTG--GGCGTCTTCTCCCACATGTCGTACTG 1548
Query 148475 CAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGC 148534
|| ||||| ||| ||||| ||| ||||||| | ||| || || || | || ||
Sbjct 1547 GAGGATGCCCTTGCTGACGGGGGAGCC-TCGTACGTGTCGTAGGGGCCCAGCTCGGCGGC 1489
Query 148535 CAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAG 148594
|||||||||||| ||||| || ||| ||||||| || ||||| || || |||| ||
Sbjct 1488 CAGTTCGCAGCTGGCCTCCAGGGCGGCGTAGTAGATGGTCTCAAAGATCTGGATGTTCAG 1429
Query 148595 CAGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCC 148654
|||| ||| |||||| | || ||||| | | | || |||||||| |||||
Sbjct 1428 CAGCTGGGCCTCGGGGCTTTCAAAGGGGTAACGCATCAGGATGAAGGCGTCGGCCAGGCC 1369
Query 148655 CTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCG-AGCG 148713
||| ||||| | || || |||| ||| ||||||| | || ||| | | ||
Sbjct 1368 CTGGACGCCGATACCGATCGGCCTGTGGCGCTTGTTGGA-CTGATCGGCCTCGGGCACCG 1310
Query 148714 GATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGT-----AAT 148768
| ||| ||| || |||||||||| || || ||| | ||| || || | |
Sbjct 1309 GGTAGAAGTTAATCTCTATGATCTTGTTCAGGTTCTTCACGATCACTTTGGTCACAGACT 1250
Query 148769 TCTG-CGCAGCAATTCAAAATCGTACTTGTCATCTACGATGCATCGGTTCACGGCGATAG 148827
| | | || |||||| || | ||| | ||| ||| | ||||| |
Sbjct 1249 CCAGTTTCTTGAAGTCAAAAGTCCGCTCGGGGGTGACG-TACAT--GTTGAGAGCGATGG 1193
Query 148828 AGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCT---GTACTCTACGATCTCGGCGC 148884
|||| ||||| ||||| || |||||| | | || ||| || ||||| || | ||
Sbjct 1192 AGGCCAGATTACACACAGCGACCTCATC---GCCACTGGAGTATTCAACGATTTCCGTGC 1136
Query 148885 ACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGT 148944
| || |||||||| ||||| |||| ||||| || |||||||| |||||||| ||||
Sbjct 1135 AGAGGTTGCTGCACTTGATGGTTCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGT 1076
Query 148945 CCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATGAACCGATGCA 149004
| ||||||||||||||||| ||| | ||| ||| | || | ||| | ||
Sbjct 1075 CTTTGTACAGCATGTACGGCGTGCCCGACTCCGTCTGGGACTCGATGATGGCGTGCCACA 1016
Query 149005 GGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATACAGCC 149064
| ||| || ||| ||| | || |||||| |||| ||| || || |||
Sbjct 1015 CCTGCTGAGCCTTCACCACACGCTTGACCCGGCCCTCCCGCTCATATTGGGTGTAGAGCT 956
Query 149065 GCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCG 149124
||| ||| |||| || |||| ||||| || ||||||| || | || ||||| || |
Sbjct 955 TCTCAAACTCCTCCCCCCAGCACTCGTCCAGCCCGGGGCTCTCGCTGGGACACATCAGAG 896
Query 149125 ACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACA 149184
|||| | || | ||| | |||||| ||||| ||||| | ||| | |||| |
Sbjct 895 ACCAGTCCTGGTTGCTCTCCACCCTCTTCATGAACAGGTCGGGGATCCACAAGCCGTAGA 836
Query 149185 TGAGGTCGC--GCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCT 149242
||| || | || | ||| || || ||| |||| ||| | || | |
Sbjct 835 AGAGATCTCTGGCTCTCTGC--TCCTCCTTCCCCGTGTTCTTCTTCAGCTCCAGGAAGTC 778
Query 149243 GAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC---TTGCC 149299
||| | ||| |||||||||||| | ||||| |||| ||||| ||| |||||
Sbjct 777 GAACACGTCAAAGTGCCACGGCTCCAGGTACATGGCGAAGGCGCCGGGTCGCTTGTTGCC 718
Query 149300 GCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACT 149359
|||||||||||| | ||| | ||||||| | || | | ||| || | | || |
Sbjct 717 GCCCTGGTCGACATAGCGTGCTGTGTTGTTGTAGACCCTCAGCATGGGGACCAGCCCGTT 658
Query 149360 GGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGAC 149419
|| ||||||| || | ||| || ||| | ||| | | ||| ||
Sbjct 657 GGAGTTGCCGTTGGTGCCGGCGATGTAGCTCCCGGTGGATCGGATGCAGCTGACGGCCAC 598
Query 149420 GCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGATGC 149478
||||| || || |||| |||| |||||| || || | ||||| ||||||||
Sbjct 597 ACCGATTCCTCCTGCCG-ACTTGGAGATGAGTGCACACTGCTTCAGCGTGTCGTAGATGC 539
Query 149479 CCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCG 149538
|||||||||||||| ||||||||| ||||| ||||| | | | || || |
Sbjct 538 CCTCGATGCTGTCGTCCTTCATGGTGAGCAGGAAGCAGCTGGAGAGCTGAGGCCGGTTGG 479
Query 149539 TGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCGT 149598
| || || ||| | |||||| |||||| || || | |||| | || | ||
Sbjct 478 TTCCTGCGTTGAAGAGCGTGGGGGAGGCGTGGGTGAACCACTTCTCCGAGAGCAGGTTGT 419
Query 149599 ACGACTCGAGCACGCGGTCCATGTCATCGCC--ATGGATGCCTATGGCGACGCGCATCAG 149656
| | ||||| || ||| || || || | ||||| || | | || | ||| ||
Sbjct 418 AGGTCTCGATGGCGGCGTCGATATC--CGTCTTGTGGATTCCGACCGACACCCTCATGAG 361
Query 149657 CATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTTCTAG 149716
||| |||||||| ||||||||||||||| || || |||| |||| || ||
Sbjct 360 CATGTGCTGCGGCCGCTCCGCCACTTTGCCGTTGATCTTCAGCAGGTAGGATCGCTCCAG 301
Query 149717 TGTCTTGTAGCCAAAGTACTTGTAG 149741
|||||| |||| ||| | ||||||
Sbjct 300 CGTCTTGAAGCCGAAGAAGTTGTAG 276
>seq152719
Length=2073
Score = 120 bits (132), Expect = 3e-22
Identities = 151/205 (74%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| |||||||| |||||||| || || ||||| ||| ||| ||| | || || ||||
Sbjct 523 ATGGATGGTGGATTCTTTCTGGATGTTATAATCTGACATGGTGCGACCA-TCTTCCAGCT 581
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
||||||| || | || |||| |||||| || ||||||||||| ||||| || |||||
Sbjct 582 GCTTGCCGGCAAAGATCAGCCTCTGCTGATCAGGAGGGATGCCCTCCTTATCCTGGATCT 641
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| || | | ||||| |||||| |||| || || || | |||| || || || |
Sbjct 642 TAGCTTTTACATTCTCAATGGTGTCGCTGGGTTCAACCTCCAGAGTGATAGTCTTACCAG 701
Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660
|||| || || || || ||||||||
Sbjct 702 TCAGGGTCTTCACAAAGATCTGCAT 726
Score = 116 bits (128), Expect = 4e-21
Identities = 148/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516
||| | ||||||||||||||| || ||||| ||| | ||| ||| || |||||
Sbjct 67 ATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCTTCCAGCTG 126
Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576
|||||| || | || |||| |||||| || ||||||||||| ||||| || ||||||
Sbjct 127 CTTGCCGGCAAAGATCAGCCTCTGCTGATCAGGAGGGATGCCCTCCTTATCCTGGATCTT 186
Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
|||| | ||||| |||||| |||| || || || | |||| || || || ||
Sbjct 187 AGCTTTGACATTCTCAATGGTGTCGCTGGGTTCAACCTCCAGAGTGATGGACTTACCAGT 246
Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660
||| || || || || ||||||||
Sbjct 247 CAGGGTCTTCACAAAGATCTGCAT 270
Score = 116 bits (128), Expect = 4e-21
Identities = 148/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516
||| ||| |||||||||||| || ||||| ||| | ||| ||| || |||||
Sbjct 295 ATGAATGCAGGACTCTTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCTTCCAGCTG 354
Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576
|||||| || | ||||||| ||||||||| ||||||||||||||||| || ||||||
Sbjct 355 CTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGAGGGATGCCTTCCTTATCCTGGATCTT 414
Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
|||| | ||||| |||||| |||| || || | | |||| || ||||| ||
Sbjct 415 AGCTTTGACATTCTCAATGGTGTCGTTGGGTTCAACCACCAGAGTGATAGTCTTGCCTGT 474
Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660
|| || || || || ||||| ||
Sbjct 475 GAGGGTCTTCACAAAGATCTGAAT 498
>seq152718
Length=3078
Score = 105 bits (116), Expect = 6e-18
Identities = 148/205 (72%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||||||||||||||| || |||| ||| | ||| ||| | || || ||||
Sbjct 2170 ATGGAGGGTGGACTCTTTCTGGATGCTGTAGTCGGAGAGAGTGCGACCA-TCTTCCAGCT 2228
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
||||||| || | || |||| | ||| || | ||||||||||||||| || ||||
Sbjct 2229 GCTTGCCGGCAAAGATCAGCCTGTACTGTTCAGAAGGGATGCCTTCCTTATCCTGAATCT 2288
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| |||| | ||||| |||||| |||| || || || | |||| ||| || || |
Sbjct 2289 TAACTTTGACATTCTCAATGGTGTCGCTGGGTTCAACCTCCAGAGTGATGGTCTTACCAG 2348
Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660
|||| || || || || ||||||||
Sbjct 2349 TCAGGGTCTTCACAAAGATCTGCAT 2373
>seq6427
Length=3314
Score = 104 bits (114), Expect = 2e-17
Identities = 135/184 (73%), Gaps = 2/184 (1%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||||||||| ||||| || ||||| ||| | ||| | | | || || ||||
Sbjct 3131 ATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCA-TCTTCCAGCT 3189
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
||||||| || | || |||| |||||| || || || |||||||||||||| |||||
Sbjct 3190 GCTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCT 3249
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| ||||| | || | |||||| ||||||| || || | ||||| ||| ||||| |
Sbjct 3250 TGGCCTTGACATTTTCGATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGTCTTGCCCG 3309
Query 133636 TCAG 133639
| ||
Sbjct 3310 TGAG 3313
>seq103378
Length=1867
Score = 100 bits (110), Expect = 3e-16
Identities = 82/100 (82%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 148864 TGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGAT 148923
||||||| || ||||| | ||||||||||||| ||||||| |||| |||| || |
Sbjct 1784 TGTACTCCACTATCTCTGTGCACAGATTGCTGGATTTGATGGTTCCCAGATTCTGCTGGT 1725
Query 148924 TGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGG 148963
||||||| | |||||| ||||||||||| |||||||||||
Sbjct 1724 TGCTCTTCCCGTTGCAGGCGTCCTTGTAGAGCATGTACGG 1685
>seq59939
Length=800
Score = 96.9 bits (106), Expect = 3e-15
Identities = 115/156 (74%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
|| || |||||||| || || | || |||| |||||| || || || ||||||||||||
Sbjct 11 TCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTG 70
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| |||||| ||||| | || | ||||| | ||||| || |||| ||||| |
Sbjct 71 TCCTGGATCTTGGCCTTGACATTTTCGATTGTGTCACTAGGCTCAACCTCGAGGGTGATG 130
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCATG 133661
|| ||||| || || || || || || |||||||||
Sbjct 131 GTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCATG 166
>seq59938
Length=2926
Score = 93.3 bits (102), Expect = 4e-14
Identities = 102/136 (75%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
|||||||| || | || |||| |||||| || || || |||||||||||||| ||||
Sbjct 2791 TGCTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATC 2850
Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
|| ||||| | |||| |||||| ||||||| || || | ||||| ||| |||||
Sbjct 2851 TTGGCCTTGACATTTTCAATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGTCTTGCCA 2910
Query 133635 GTCAGAGTTTTTACGA 133650
|| || || || ||||
Sbjct 2911 GTGAGGGTCTTGACGA 2926
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 480245317534480
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