Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq388653 181 2e-40
seq496362 111 4e-19
>seq388653
Length=382
Score = 181 bits (200), Expect = 2e-40
Identities = 227/311 (73%), Gaps = 3/311 (1%)
Strand=Plus/Plus
Query 110830 AAGAACAAA---GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGA 110886
||||| ||| | ||| | |||||||| | ||| ||||||| ||| |||||||||||||
Sbjct 8 AAGAAGAAATGCGTGCAAGAGATTTATTCTTTGCCATGTGGACTTCTGATTTATTCATGA 67
Query 110887 AACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTAT 110946
||||||| |||||| | || | ||| || | ||||||||| | | |||||| | |
Sbjct 68 AACGTGTACAAGAAGACGGAAACTGGACTTTAATGTGTCCTAACGAATGTCCTGGATTGT 127
Query 110947 CTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGT 111006
||||| ||||| |||||||||||| | || |||| || || |||| || ||
Sbjct 128 ACGATGTTTATGGTGAAGAGTTTGAAGCATTATATGAAAGCTACGAGAAAGCTGGAAAAG 187
Query 111007 TTCGCAAACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAA 111066
| | ||| |||| ||| || ||| | ||| ||||| || ||||| ||| | || |
Sbjct 188 GTAGAAAAACAATTAAAGCACATGAATTGTGGGAGAAAATTCTAGAATCTCAAATCGAGA 247
Query 111067 CTGGAACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATT 111126
|||||||||| ||||| || ||||||||| || || ||||| || |||| |||||
Sbjct 248 CTGGAACTCCGTATATGTTATATAAAGATGCGGCAAACCGTAAATCAAACCAAAAGAATT 307
Query 111127 TAGGAACAATT 111137
||||||| |||
Sbjct 308 TAGGAACTATT 318
>seq496362
Length=882
Score = 111 bits (122), Expect = 4e-19
Identities = 366/565 (65%), Gaps = 27/565 (5%)
Strand=Plus/Plus
Query 131435 TTTCCAATTAAACATCACGATGTTTTCGATATGTATAAGAAATC--TGTTGCGGCCTTCT 131492
||||| || || || || ||| ||| || | ||||| ||| || ||| ||||
Sbjct 62 TTTCCGATCAAGCACCAAGATATTTGGGAATTTTATAA---ATCCATGGAGCGAGTTTCT 118
Query 131493 GGACTGTTGAAGAGATCGATATGACCAAAGATATTGATGATTGGGAAAAATTAACCTTGA 131552
|||||| ||||| || ||| || | ||||| | | || ||| | || | ||||
Sbjct 119 GGACTGCCGAAGAAATTGATTTGTCACAAGATTTAAACGACTGGAATAAC---AAGTTGA 175
Query 131553 AT------GAAAAAGATTTTGTTTCCAAAG---TTCTTGCATTCTTCGCCGGAAGTGATG 131603
|| ||| || | ||| | |||| || | ||||| ||||||| || |
Sbjct 176 ATAAAGACGAACAATACTTTAT---CAAACACATTTTAGCATTTTTCGCCGCTTCAGACG 232
Query 131604 GCATTGTTATTGAAAATCTTGTTATTAATTTCATTCAAGAAATTGATATTCCTGAAGTAA 131663
| ||||| | ||||||||||| | || || | | ||| | | | |||||| |
Sbjct 233 GAATTGTAAATGAAAATCTTGCTGAAAACTTTGTAAATGAAGTGCAATATGCTGAAGCGA 292
Query 131664 CAT-CGTTCTACACATTTCAAGCCGCTGTTGAATCTATTCATAGCGAGATGTATTCATTA 131722
|| | ||||| || ||| | | ||| |||||| ||||| | |||||| ||
Sbjct 293 AATTCTTTCTATGGTTTCCAAATCATGATGGAAAATATTCACAGCGAAACGTATTCCTTG 352
Query 131723 TTGATTGAGAGTCTTGTTAAAAATGAAGATGATAAAAATAAATTATTTGATGCTGTAAAT 131782
|| || || | | ||| ||| | |||| || ||| | ||||| | || || |
Sbjct 353 TTAATCGACACTTATGTAAAAGACGAAGCAGAGAAAGCCGATTTATTCAACGCATTAGAA 412
Query 131783 AAATTTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCC 131842
|||||||| || ||||||||||| || ||||| ||| |||||||| |||||
Sbjct 413 GTTTTTCCTGCTATCAAAAAGAAAGCGGACTGGGCAATTCAATGGATT------GATTCA 466
Query 131843 GCTAATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGT 131902
| | ||| | || | | |||||||| || ||||| || ||||| ||||||
Sbjct 467 GATTCTTTCGCAGAGCGATTGATTGCTTTTGCAGCAGTGGAAGGAATTTTCTTCTCAGGT 526
Query 131903 GCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCC 131962
||||| ||| | || || ||| | || || || || |||||||| ||| | |||| ||
Sbjct 527 GCTTTTTGTTCCATTTTCTGGTTGAAAAAACGAGGTTTGATGCCAGGATTGACATTCTCA 586
Query 131963 AATCAATTCATCTCGAGAGATGAAG 131987
|| |||| || || | || ||||
Sbjct 587 AACGAATTGATTTCTCGTGACGAAG 611
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178821996093422
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |