Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq152719 114 8e-21
seq152718 96.9 2e-15
>seq152719
Length=2073
Score = 114 bits (126), Expect = 8e-21
Identities = 165/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||| ||||||| || | ||| | ||| || ||| |||||| || |||||||| |||||
Sbjct 43 ACCTCCTCTCAGGCGGAGCACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGA 102
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
||| ||||| |||| |||| || || |||||||| |||| | ||||||||| | ||
Sbjct 103 GAGAGTGCGGCCGTCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCAGGAGG 162
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCA 33700
| || || || || || || ||| | ||| ||| ||||||||| | ||| |
Sbjct 163 GATGCCCTCCTTATCCTGGATCTTAGCTTTGA-CATTCTCAATGGTGTCGCTGGGTTCAA 221
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| | ||||| || | || || |||||||||||||||
Sbjct 222 CCTCCAGAGTGATGGACTTACCAGTCAGGGTCTTCACAAAGATCTGCATA 271
Score = 96.9 bits (106), Expect = 2e-15
Identities = 161/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||| ||||||| || || |||| ||| | | |||||| || |||||||| |||||
Sbjct 271 ACCTCCTCTCAGCCGCAAGACCAGATGAATGCAGGACTCTTTCTGGATGTTGTAGTCGGA 330
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
||| ||||| |||| |||| || || |||||||| || | | |||||| ||| | ||
Sbjct 331 GAGAGTGCGGCCGTCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGAGG 390
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCA 33700
| ||||| || || || || ||| | ||| ||| ||||||| | | ||| |
Sbjct 391 GATGCCTTCCTTATCCTGGATCTTAGCTTTGA-CATTCTCAATGGTGTCGTTGGGTTCAA 449
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| | | ||||| || || ||||| | || || ||||||||||| |||
Sbjct 450 CCACCAGAGTGATAGTCTTGCCTGTGAGGGTCTTCACAAAGATCTGAATA 499
Score = 95.1 bits (104), Expect = 8e-15
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||| |||||||| || | ||| | ||| | ||| ||||| || ||||| ||||| ||
Sbjct 499 ACCTCCTCTCAAGCGCAGCACAAGATGGATGGTGGATTCTTTCTGGATGTTATAATCTGA 558
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| ||||| | || |||| || || |||||||| |||| | ||||||||| | ||
Sbjct 559 CATGGTGCGACCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCAGGAGG 618
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCA 33700
| || || || || || || ||| | ||| ||| ||||||||| | ||| |
Sbjct 619 GATGCCCTCCTTATCCTGGATCTTAGCTTTTA-CATTCTCAATGGTGTCGCTGGGTTCAA 677
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || | ||||| || ||||| || | || || ||||||||||||||
Sbjct 678 CCTCCAGAGTGATAGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 726
>seq152718
Length=3078
Score = 96.9 bits (106), Expect = 2e-15
Identities = 161/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||| | ||||| || || || | ||| || ||| |||||| || ||| |||| |||||
Sbjct 2146 ACCTCTTCTCAGCCGCAAGACAAGATGGAGGGTGGACTCTTTCTGGATGCTGTAGTCGGA 2205
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
||| ||||| | || |||| || || |||||||| |||| | | ||| || ||
Sbjct 2206 GAGAGTGCGACCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTGTACTGTTCAGAAGG 2265
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCA 33700
| ||||| || || ||| || ||| | ||| ||| ||||||||| | ||| |
Sbjct 2266 GATGCCTTCCTTATCCTGAATCTTAACTTTGA-CATTCTCAATGGTGTCGCTGGGTTCAA 2324
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| || ||||| || | || || |||||||||||||||
Sbjct 2325 CCTCCAGAGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCATA 2374
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 326598796947840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |