Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_025422.1 Length=155997 Score E Sequences producing significant alignments: (Bits) Value seq509954 192 6e-44 seq459402 89.7 5e-13 >seq509954 Length=433 Score = 192 bits (212), Expect = 6e-44 Identities = 308/438 (70%), Gaps = 12/438 (3%) Strand=Plus/Minus Query 86261 TCGATAAAGACCTTAATGCGACCATTTAGAACGCCGACGAAAGTATTACCAGTATCGTCA 86320 || || || || || | ||||| |||||||| || | || |||||||| ||||| || Sbjct 431 TCAATGAATACTTTGAAACGACCGTTTAGAACACCAGCAAATGTATTACCGGTATCATCT 372 Query 86321 ACATTCAGGCCATTGTTAGCATTCAGAGCAGGAGCATAATCCAGAACGCCTGCCATCATC 86380 || || | || ||| | |||||| || |||| || | || || | || | Sbjct 371 ACTTTGTAGA-----TTTGCAGAGATAGCAGGTGCGAAATCAAGGATTCCAGC-AGCAGC 318 Query 86381 AGA-GCCGAAGCAACGTTCGATGAACAGATTAGGATGTTACCCTTACCACGACGAGTAGC 86439 | || ||||| |||| ||||||||||| | | |||||| |||||||| | || | Sbjct 317 CAATGCAGAAGCTACGTCAGATGAACAGATAATAAAGTTACCTTTACCACGTCTGGTTTC 258 Query 86440 TTTGGCGACGGCGTTACATTCCATTTCGATTTGGAACAGAAGACCTTTGAACTTTTCAAC 86499 ||| |||| |||| || ||| |||||||||| ||| |||||||| ||||| || Sbjct 257 TTTAGCGATTTGGTTAGCATCACGTTCAATTTGGAACATAAGTCCTTTGAATTTTTCTAC 198 Query 86500 TGACCAACGACCGTTGGCGTCGACGTCAAGGTCAAAAGTGCCGGCAGTAGTAGTA----T 86555 |||||| ||||| || || || ||||| | || || | || || | | | | | Sbjct 197 TGACCAGCGACCATTTGCATCTACGTCTAAATCGAAGATACCAGCGTTTGCTGAACCAGT 138 Query 86556 TTGCAGCACCAGTTGTAGCAGTGACGTAAATAGTACGAACCATTTCACGGTTCATTTCAG 86615 ||| ||||||| | | ||||| | || | ||||||| | |||||||| ||||| | Sbjct 137 TTGT-GCACCAGGTTTTGCAGTTGCATATACGGTACGAATTAGCTCACGGTTAATTTCTG 79 Query 86616 CAAGAATTTCAGTAGTCAGAATGCTTGAAAGTTCAGTTTCAGCATCCAGGCCATGAACAG 86675 ||||||||||||| | ||||| ||| |||||| ||| || |||| |||||| |||| Sbjct 78 CAAGAATTTCAGTTGAAAGAATATTTGCAAGTTCTTCTTCTGCGTCCAAGCCATGTACAG 19 Query 86676 CTTTTAGATCCTGAGCAA 86693 |||| | ||||||||||| Sbjct 18 CTTTCATATCCTGAGCAA 1 >seq459402 Length=1498 Score = 89.7 bits (98), Expect = 5e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 143895 TGGCTGAATAGACAGGACTCGAACCTGTGACATTCTGAGTAACAGTCAGGCGCTCTACCA 143954 |||||| |||||||| |||||||||||||| || || |||||||| || ||||||||| Sbjct 162 TGGCTGCTTAGACAGGGCTCGAACCTGTGACCATCAGATTAACAGTCTGGTGCTCTACCA 103 Query 143955 ACTGAGCTACTA 143966 |||||||||||| Sbjct 102 ACTGAGCTACTA 91 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495784171383440