Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_025422.1
Length=155997
Score E
Sequences producing significant alignments: (Bits) Value
seq509954 192 6e-44
seq459402 89.7 5e-13
>seq509954
Length=433
Score = 192 bits (212), Expect = 6e-44
Identities = 308/438 (70%), Gaps = 12/438 (3%)
Strand=Plus/Minus
Query 86261 TCGATAAAGACCTTAATGCGACCATTTAGAACGCCGACGAAAGTATTACCAGTATCGTCA 86320
|| || || || || | ||||| |||||||| || | || |||||||| ||||| ||
Sbjct 431 TCAATGAATACTTTGAAACGACCGTTTAGAACACCAGCAAATGTATTACCGGTATCATCT 372
Query 86321 ACATTCAGGCCATTGTTAGCATTCAGAGCAGGAGCATAATCCAGAACGCCTGCCATCATC 86380
|| || | || ||| | |||||| || |||| || | || || | || |
Sbjct 371 ACTTTGTAGA-----TTTGCAGAGATAGCAGGTGCGAAATCAAGGATTCCAGC-AGCAGC 318
Query 86381 AGA-GCCGAAGCAACGTTCGATGAACAGATTAGGATGTTACCCTTACCACGACGAGTAGC 86439
| || ||||| |||| ||||||||||| | | |||||| |||||||| | || |
Sbjct 317 CAATGCAGAAGCTACGTCAGATGAACAGATAATAAAGTTACCTTTACCACGTCTGGTTTC 258
Query 86440 TTTGGCGACGGCGTTACATTCCATTTCGATTTGGAACAGAAGACCTTTGAACTTTTCAAC 86499
||| |||| |||| || ||| |||||||||| ||| |||||||| ||||| ||
Sbjct 257 TTTAGCGATTTGGTTAGCATCACGTTCAATTTGGAACATAAGTCCTTTGAATTTTTCTAC 198
Query 86500 TGACCAACGACCGTTGGCGTCGACGTCAAGGTCAAAAGTGCCGGCAGTAGTAGTA----T 86555
|||||| ||||| || || || ||||| | || || | || || | | | | |
Sbjct 197 TGACCAGCGACCATTTGCATCTACGTCTAAATCGAAGATACCAGCGTTTGCTGAACCAGT 138
Query 86556 TTGCAGCACCAGTTGTAGCAGTGACGTAAATAGTACGAACCATTTCACGGTTCATTTCAG 86615
||| ||||||| | | ||||| | || | ||||||| | |||||||| ||||| |
Sbjct 137 TTGT-GCACCAGGTTTTGCAGTTGCATATACGGTACGAATTAGCTCACGGTTAATTTCTG 79
Query 86616 CAAGAATTTCAGTAGTCAGAATGCTTGAAAGTTCAGTTTCAGCATCCAGGCCATGAACAG 86675
||||||||||||| | ||||| ||| |||||| ||| || |||| |||||| ||||
Sbjct 78 CAAGAATTTCAGTTGAAAGAATATTTGCAAGTTCTTCTTCTGCGTCCAAGCCATGTACAG 19
Query 86676 CTTTTAGATCCTGAGCAA 86693
|||| | |||||||||||
Sbjct 18 CTTTCATATCCTGAGCAA 1
>seq459402
Length=1498
Score = 89.7 bits (98), Expect = 5e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 143895 TGGCTGAATAGACAGGACTCGAACCTGTGACATTCTGAGTAACAGTCAGGCGCTCTACCA 143954
|||||| |||||||| |||||||||||||| || || |||||||| || |||||||||
Sbjct 162 TGGCTGCTTAGACAGGGCTCGAACCTGTGACCATCAGATTAACAGTCTGGTGCTCTACCA 103
Query 143955 ACTGAGCTACTA 143966
||||||||||||
Sbjct 102 ACTGAGCTACTA 91
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 495784171383440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |