Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_025439.1 Length=34773 Score E Sequences producing significant alignments: (Bits) Value seq508447 86.0 1e-12 seq425165 86.0 1e-12 >seq508447 Length=1003 Score = 86.0 bits (94), Expect = 1e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 25276 ATCTCCGGCTGTGCGTCGGCGTCTACTCGCAGCCAGTCCCAGTTTTCCCATTCGGTGCTG 25335 ||||| |||||||| | | || | || | ||||||||| ||||||||||| || || Sbjct 923 ATCTCAGGCTGTGCTGCTTCATCAATACGTAACCAGTCCCAATTTTCCCATTCAGTACTT 864 Query 25336 GTCAGGCATACGCGGATATTCTGGAACGGCTCCAGGTAGCGGCCAGCGTTTTGTTTGTGG 25395 ||||| ||| |||||||| ||||| || || ||||| || | ||||| || || ||| Sbjct 863 GTCAGCACTACACGGATATTTTGGAATGGTTCTAGGTAACGACATGCGTTCTGCTTATGG 804 Query 25396 ATGCC 25400 || || Sbjct 803 ATACC 799 >seq425165 Length=3202 Score = 86.0 bits (94), Expect = 1e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 25264 GCAAGCTCGGTAATCTCCGGCTGTGCGTCGGCGTCTACTCGCAGCCAGTCCCAGTTTTCC 25323 || || || ||||| || ||||||| || ||||| | || | ||||||||| || || Sbjct 2941 GCTAGTTCTGTAATTTCAGGCTGTGAATCTGCGTCAATACGTAACCAGTCCCAATTAGCC 2882 Query 25324 CATTCGGTGCTGGTCAGGCATACGCGGATATTCTGGAACGGCTCCAGGTAGCGGCCAGCG 25383 ||||| ||||| || | ||||| || || || || || | || | || ||||| || Sbjct 2881 CATTCTGTGCTTGTAATACATACACGAATGTTTTGAAAGGTTTCTAAATATCGGCCTGCA 2822 Query 25384 TTTTGTTTGTGGATGCCTAA 25403 | |||||| ||||||||||| Sbjct 2821 TGTTGTTTATGGATGCCTAA 2802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 110458374145140