Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_025446.1 Length=157308 Score E Sequences producing significant alignments: (Bits) Value seq520838 98.7 1e-15 seq451005 86.0 6e-12 seq513135 84.2 2e-11 >seq520838 Length=421 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/226 (71%), Gaps = 12/226 (5%) Strand=Plus/Minus Query 130309 TCCTGAACTCACCAAACCATTGGGATGGTGAACAAACT---GGCAACAAGCACGTCTTCT 130365 || ||||||||||||||||||||| |||| |||||| || |||||||| | |||| Sbjct 371 TCATGAACTCACCAAACCATTGGG---GTGATCAAACTCTTGGTAACAAGCATTTGTTCT 315 Query 130366 TCATCTTGGAAGGTTGTGCGAATCCTGAAGGTACTCGTGGTTTCTACAATGAATATCTGA 130425 |||| || || ||||||| || || ||| | | ||||| ||||||||||| | ||| | Sbjct 314 TCATGTTAGAGGGTTGTGTTAACCCAGAACCTGCGCGTGGATTCTACAATGAGT-TCTTA 256 Query 130426 AGCCGGA---ACTGGATAAACATCGTAAGGTTTTTGAAATGTTGGGTAGTAAAATGAAAG 130482 | ||| || || | |||||||| || || ||| |||| | || |||| |||| Sbjct 255 A--TGGATTCGTTGAATGAGCATCGTAAAGTGTTCGAAGTGTTAGCAAGCAAAACTAAAG 198 Query 130483 TACAACCCAACGAAAACCAACTGTCTGGTTTGGGGTTCTCGACAAC 130528 || | | | | || || || |||| | || ||||| |||| Sbjct 197 CACCATCTGATGTTAATCAGCTAAGTGGTCTTGGTTTCTCTTCAAC 152 >seq451005 Length=948 Score = 86.0 bits (94), Expect = 6e-12 Identities = 71/84 (85%), Gaps = 2/84 (2%) Strand=Plus/Plus Query 76783 ATATTTGGTGACCCT-GGCTGGACTTGAACCAGCGACCAATCGATTATGAGTCGACTGCT 76841 || ||||||| | | |||||||||||||||||| ||| |||||||||||||| ||||| Sbjct 61 ATGTTTGGTGCCTCACGGCTGGACTTGAACCAGCAACCTGTCGATTATGAGTCGCCTGCT 120 Query 76842 CTAACCACTGAGCTACGGGGCCAA 76865 || |||| |||||||||| | ||| Sbjct 121 CT-ACCATTGAGCTACGGAGGCAA 143 >seq513135 Length=367 Score = 84.2 bits (92), Expect = 2e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 4039 CTTCCAACACCCATCATGTCCGGCGTTCGTACCCCAACCCGCCAATTCAGTTCTTGTGTT 4098 || |||||||| || ||||| || ||| | || || || || ||||| ||||||||||| Sbjct 239 CTACCAACACCTATTATGTCTGGGGTTAGAACACCTACACGACAATTTAGTTCTTGTGTG 298 Query 4099 CTTATCAAAACCGGTGACACTTTGGACTCAATCAATGCTACAGCCAAAAGTATTGTTGAT 4158 |||| | || |||| ||| || ||||||||||||||| || ||| ||| | Sbjct 299 GTTATTGAGTCCAACGACAGTTTAGATTCAATCAATGCTACATGCAGCTCTATCGTTAAG 358 Query 4159 TATGTATCC 4167 ||||||||| Sbjct 359 TATGTATCC 367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499951814058560