Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_025446.1
Length=157308
Score E
Sequences producing significant alignments: (Bits) Value
seq520838 98.7 1e-15
seq451005 86.0 6e-12
seq513135 84.2 2e-11
>seq520838
Length=421
Score = 98.7 bits (108), Expect = 1e-15
Identities = 160/226 (71%), Gaps = 12/226 (5%)
Strand=Plus/Minus
Query 130309 TCCTGAACTCACCAAACCATTGGGATGGTGAACAAACT---GGCAACAAGCACGTCTTCT 130365
|| ||||||||||||||||||||| |||| |||||| || |||||||| | ||||
Sbjct 371 TCATGAACTCACCAAACCATTGGG---GTGATCAAACTCTTGGTAACAAGCATTTGTTCT 315
Query 130366 TCATCTTGGAAGGTTGTGCGAATCCTGAAGGTACTCGTGGTTTCTACAATGAATATCTGA 130425
|||| || || ||||||| || || ||| | | ||||| ||||||||||| | ||| |
Sbjct 314 TCATGTTAGAGGGTTGTGTTAACCCAGAACCTGCGCGTGGATTCTACAATGAGT-TCTTA 256
Query 130426 AGCCGGA---ACTGGATAAACATCGTAAGGTTTTTGAAATGTTGGGTAGTAAAATGAAAG 130482
| ||| || || | |||||||| || || ||| |||| | || |||| ||||
Sbjct 255 A--TGGATTCGTTGAATGAGCATCGTAAAGTGTTCGAAGTGTTAGCAAGCAAAACTAAAG 198
Query 130483 TACAACCCAACGAAAACCAACTGTCTGGTTTGGGGTTCTCGACAAC 130528
|| | | | | || || || |||| | || ||||| ||||
Sbjct 197 CACCATCTGATGTTAATCAGCTAAGTGGTCTTGGTTTCTCTTCAAC 152
>seq451005
Length=948
Score = 86.0 bits (94), Expect = 6e-12
Identities = 71/84 (85%), Gaps = 2/84 (2%)
Strand=Plus/Plus
Query 76783 ATATTTGGTGACCCT-GGCTGGACTTGAACCAGCGACCAATCGATTATGAGTCGACTGCT 76841
|| ||||||| | | |||||||||||||||||| ||| |||||||||||||| |||||
Sbjct 61 ATGTTTGGTGCCTCACGGCTGGACTTGAACCAGCAACCTGTCGATTATGAGTCGCCTGCT 120
Query 76842 CTAACCACTGAGCTACGGGGCCAA 76865
|| |||| |||||||||| | |||
Sbjct 121 CT-ACCATTGAGCTACGGAGGCAA 143
>seq513135
Length=367
Score = 84.2 bits (92), Expect = 2e-11
Identities = 96/129 (74%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 4039 CTTCCAACACCCATCATGTCCGGCGTTCGTACCCCAACCCGCCAATTCAGTTCTTGTGTT 4098
|| |||||||| || ||||| || ||| | || || || || ||||| |||||||||||
Sbjct 239 CTACCAACACCTATTATGTCTGGGGTTAGAACACCTACACGACAATTTAGTTCTTGTGTG 298
Query 4099 CTTATCAAAACCGGTGACACTTTGGACTCAATCAATGCTACAGCCAAAAGTATTGTTGAT 4158
|||| | || |||| ||| || ||||||||||||||| || ||| ||| |
Sbjct 299 GTTATTGAGTCCAACGACAGTTTAGATTCAATCAATGCTACATGCAGCTCTATCGTTAAG 358
Query 4159 TATGTATCC 4167
|||||||||
Sbjct 359 TATGTATCC 367
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499951814058560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |