Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_025457.1 Length=42654 Score E Sequences producing significant alignments: (Bits) Value seq516303 170 5e-38 seq503848 89.7 1e-13 >seq516303 Length=336 Score = 170 bits (188), Expect = 5e-38 Identities = 230/318 (72%), Gaps = 7/318 (2%) Strand=Plus/Minus Query 20647 GAGCTTGAACAATTCCAATTTTGGAAAACTCAAATGGCTACTTACTACACTAATGAGGCT 20706 ||| | ||||| ||| | || |||||||| || ||| | ||| |||||| |||| Sbjct 314 GAGTTGGAACAGTTCAAGTTCTGGAAAACCCAGATGAGTGCTTGGTACACTGCTGAGAAC 255 Query 20707 AAACGTAAAGGTCGTCACATGGGTATCCTGTCACGTA---TCAATGAACTTGTGAAATAT 20763 |||||||| |||||||| | ||||||||| ||| ||| || | | ||| Sbjct 254 AAACGTAAGGGTCGTCATGTAGGTATCCTGA---GTAAGCTCACAGAGTTAGCTCGTTAT 198 Query 20764 CAAGAGGAATCACGCTTATACTTCCCGACATTCATTGACTGGCGTGGTCGTTTATACTTC 20823 ||||| || | | | |||||||| || || ||||| |||||||| || || ||||| Sbjct 197 CAAGACGAGGTAGCCCTGTACTTCCCAACCTTTATTGATTGGCGTGGACGATTGTACTTT 138 Query 20824 CGTTCTAATCTTAACCCGCAATCATCTGATGCAGTTAAAGGCTGCTTAGAGTTCGCTGAG 20883 | ||| | || || || |||||| || |||| ||||| || | |||||||||||| Sbjct 137 AGAAGTAACTTGAATCCACAGTCATCT-ATTCAGTCAAAGGTTGTCTTGAGTTCGCTGAG 79 Query 20884 GGTAAAGTGTTAGGTAAAGATGGACTGCGTTGGTTAAAGGCGCATGTCGCTAACTGTTGT 20943 |||||| ||||| |||||| || |||||||| || ||||| |||||||| ||| Sbjct 78 GGTAAACGTCTAGGTTCAGATGGTCTTATGTGGTTAAAAGCTCATGTAGCTAACTGCTGT 19 Query 20944 GGTTTTGATAAACACGAC 20961 |||| ||||||||||||| Sbjct 18 GGTTATGATAAACACGAC 1 >seq503848 Length=345 Score = 89.7 bits (98), Expect = 1e-13 Identities = 185/270 (69%), Gaps = 4/270 (1%) Strand=Plus/Plus Query 19811 CAGGTATTGGTGGTAAGTATAAGAAGTTATTAAAGATTGCAAAGCCTGAAGTATTAGTTA 19870 |||||| | |||||||| ||||| | || || || || || || | || | Sbjct 66 CAGGTACTAAAGGTAAGTACAAGAACCTCCTACGTATAGCCTCACCAGAGGTGCTGGTAA 125 Query 19871 TGGCGGGTATCCGCGAGGTTATCAATGGCTGTGCTAACCCTGAACCTATAGTA-ATGCAG 19929 |||| ||| | || |||||||| ||||| |||||| |||| || | || | |||||| Sbjct 126 TGGCTGGTTTACGTGAGGTTATTAATGGTTGTGCTCACCCAGA-CTTACAACCTATGCAG 184 Query 19930 AGCTTCTTACGTCAACTAGGTCGGATTATTGAATCTGAATCTATGTTGGTATGTATGGAG 19989 | || ||||| | | || | | ||||| ||||| |||| | | |||||||| Sbjct 185 ACAGTCCTACGTAACATCGGGAGAGTAATTGAGTCTGAGAGTATGCTCGCTTGTATGGAA 244 Query 19990 CAAGTATCTGATGTTTATACAAATCGTACAGTAGAGTATCTTGATTCAGCAGGTACTAAA 20049 ||||| ||| ||||| | | ||||||||||| | ||| ||||||||||||| Sbjct 245 CAAGTGAATGACCGATATACTTCTAGAACAGTAGAGTACTTGGATGCAGCAGGTACTAAG 304 Query 20050 TCCACTACA-CACCGCTACCGTACATTCCT 20078 | || | || ||| | ||| | |||||||| Sbjct 305 T-CAGTCCACCACAGGTACAGAACATTCCT 333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135520197857184