Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_025459.1
Length=53744
Score E
Sequences producing significant alignments: (Bits) Value
seq500878 167 8e-37
seq503300 163 1e-35
seq512336 127 7e-25
seq268385 116 1e-21
seq518968 96.9 1e-15
seq491780 89.7 2e-13
seq488020 86.0 2e-12
seq481550 82.4 3e-11
>seq500878
Length=594
Score = 167 bits (184), Expect = 8e-37
Identities = 116/132 (88%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 50 CGTGAGACCCTGCCGCTGCAGTTCCTGCCGGTTCAGCTCCACGGTTTGGTGTACGAAGTT 109
||||| | ||||||||||| |||||||| ||||| || ||||| ||||||||| |||||
Sbjct 591 CGTGAACCTCTGCCGCTGCAATTCCTGCCAGTTCAACTGCACGGCTTGGTGTACCAAGTT 532
Query 110 CCGGGTCGTGGCCGCTTCGGTGGTCTGGAAGTGACCTACCCGCGCGCCATCGACATCTGG 169
||||| ||||| ||||||| |||||||||||| |||||||||||||| ||||||||||||
Sbjct 531 CCGGGCCGTGGTCGCTTCGCTGGTCTGGAAGTTACCTACCCGCGCGCAATCGACATCTGG 472
Query 170 TACGGCCTGTAA 181
|||||| | |||
Sbjct 471 TACGGCATCTAA 460
>seq503300
Length=1332
Score = 163 bits (180), Expect = 1e-35
Identities = 303/443 (68%), Gaps = 4/443 (1%)
Strand=Plus/Minus
Query 50652 CGATGTGGTTACTGTCCAAGGGCTGCAGAATCTGTTGACCAACCCTGCTGGTGAGGCTGC 50711
||| || ||||| || | || || ||||| || |||| |||||| ||||| |||||
Sbjct 1330 CGACGTAGTTACCATCAACGGCCTACAGAACTTGCTGACTTCCCCTGCGGGTGAAGCTGC 1271
Query 50712 TTTGTATAAGCGCTTCCGCATGATGAAGCAGATGAAGTCCAACCACAACATTCTGCTGCT 50771
|| ||||||||||| ||||||||||||||||||||| | ||||| || | |||||
Sbjct 1270 GGTGATGAAGCGCTTCCGTTTGATGAAGCAGATGAAGTCCATCTACAACGTTATCCTGCT 1211
Query 50772 GGACAACACCGAAGAGTACAGCCCCAAGACCATCGCACTGAATGGCGTCAAGGATCTCAT 50831
||| | || |||||| ||| | ||||| || | || |||||| ||||| | ||
Sbjct 1210 GGATAGCAACGAAGAATACGACAGCAAGAAGATTTCCTTGTCTGGCGTGAAGGACATGAT 1151
Query 50832 CTGGGAATACTT--ACGTATCATTGCTGCTGCTTGTGGTGTACCTGCAACGAGATTCCTC 50889
|||||| ||||| | ||| || || |||||| |||| | |||||||| | ||| |
Sbjct 1150 CTGGGAGTACTTGGAAGTA--ATCGCCGCTGCTGTTGGTATCCCTGCAACTCGCTTCTTG 1093
Query 50890 TCGGCGTCGCCCGATGGCATGAACGCAACTGGCGAGTCAGACCTCAATAACTATATTGAC 50949
|| || || || ||| |||| |||||||| ||| || || |||||| |||||
Sbjct 1092 TCTGCATCCCCAAGTGGGTTGAATGCAACTGGTGAGAGTGATCTTGTTAACTACGTTGAC 1033
Query 50950 CTGCTGCGCCAGAAACAGAAGTCTGTCTTTGACAAACGACTGCGTGTCATCGATAAGATT 51009
|||| | |||||| ||| | ||| || || ||||||| |||||
Sbjct 1032 TTGCTCATGGGTACTCAGAAGCGTGTGTATGATCCTCGCTTGAAGATCATCGACGAGATT 973
Query 51010 CTCGCTGCTCACTTCGACATCCAGCCGTTCAAGTATACCTGGAACTGCGCATTCCCAGAG 51069
|| |||||| | || |||| | ||||| ||||||||| ||||| ||
Sbjct 972 ATCCAGATTCACTTTGGGCTCAAGCCTTGGAAGTACGAGTGGAACTGCATCTTCCCTGAA 913
Query 51070 TCGTCCCTGCAGAAGGAAGAACG 51092
|| | ||||| ||||||||
Sbjct 912 TCTGCTGCACAGAAAGAAGAACG 890
>seq512336
Length=506
Score = 127 bits (140), Expect = 7e-25
Identities = 280/416 (67%), Gaps = 8/416 (2%)
Strand=Plus/Minus
Query 53287 AAGATGGCCGGTATGCCGCTGGAAGCTCGTAAGACCATGGCCGCTCGCCGTGGTTACGAG 53346
|| ||| ||| ||||| || ||||| ||| | |||| |||||||||||||||||
Sbjct 506 AACATGAGCGGCATGCCTCTCGAAGCACGTCGCGCACTGGCTGCTCGCCGTGGTTACGAA 447
Query 53347 GAGTACATCAACTCCGTTGTATGGCGTGGTGATGCTGATGCTGGTCTGGGTGGCCTGTTC 53406
|| ||| ||||| | | ||| || ||||| | || | | | | |||||||||
Sbjct 446 GAATACGTCAACGATGCAATCTGGTACGGCGATGCCGCTGGTTCTTTCGTCGGCCTGTTC 387
Query 53407 ACCAACACCGACATC-CGCCGTACCGCTGTTGC--CAAGGGCA----CTGCTGGTACCAC 53459
||||||| |||| ||| ||| | ||| | ||| ||| ||| | ||||
Sbjct 386 GGCAACACCTTCATCGCGCACAACC-CAGTTCCTGCAACTGCACAATCTGGCGCCTCCAC 328
Query 53460 CGGCTGGATCACCAAGACTCCGGACGAAGTGATCGCTGACCTGACCCACGCTTGTGGTGA 53519
||||||| ||||||||| |||||||| || || ||||||| | |||||||||| |
Sbjct 327 TAAGTGGATCAACAAGACTCCAGACGAAGTTATTGCCGACCTGAACAACGCTTGTGGCGC 268
Query 53520 CATGTACGCGACCACCAAGAAGATCCATGCTCCGAAGGAGATCTGGATGTCGACCATGAA 53579
|||| ||| | |||||||| ||||| ||| | || | ||| || || ||| |
Sbjct 267 AATGTTCGCTGCTACCAAGAAAATCCACCGTCCAGAAGAACTGTGGTTGCCGGTGATGGA 208
Query 53580 CTGGAATTACCTGTTCTCTACCCCGCGTAGCCCGATGTCTGACAAGACAGTCGGTGACTA 53639
||||| ||| | || ||||| ||| || | ||||| || | ||| ||
Sbjct 207 ATGGAACTACATTCGTTCCACCCCACGTTCGCCTCAGAGTGACACCACCATTCTTGAGTA 148
Query 53640 CTTCTGCGAGAACAACCAGTTCGGCATCAAGAAGGAGAACATCAAGCCGCTGAACG 53695
|||| | |||||||| ||||| || | | ||| ||| | || || |||||||
Sbjct 147 CTTCCTCAAGAACAACGAGTTCATCACCGACAAGTCGAAGGTGAAACCTCTGAACG 92
>seq268385
Length=1441
Score = 116 bits (128), Expect = 1e-21
Identities = 242/353 (69%), Gaps = 8/353 (2%)
Strand=Plus/Plus
Query 45111 AATCAACCTGCCTACACCTGTTCTTAACGGATGT-AGAAACGGGGATTTCGACTCGATCT 45169
||| || || || || ||||||||||| || ||| | || || ||||||||| ||
Sbjct 314 AATTAATCTCCCGACTCCTGTTCTTAATGG-TGTCCGTAATGGTGATTTCGACAGTATTA 372
Query 45170 CGTGCTCGGTCATTACCGGTGGTGATACAGTAGATTCCATTGGTGTGGCAGAGCACCTCG 45229
|| | || |||| || ||||| | ||||| || || || || ||||| |||
Sbjct 373 GTTGTTGTGTTATTAGTGGCGGTGACTCCGTAGACAGTATCGGCGTTGCTGAGCATATCG 432
Query 45230 CATACAAGATGACTGCTAAGAAGGCAGGTATCGGTATCGAGATGCATACCCGCTCTGCTG 45289
|||| |||||||| ||||||||||| || |||||||| ||| | ||||| || ||
Sbjct 433 CATATAAGATGACAGCTAAGAAGGCGGGCATCGGTATTGAGTTTACAACCCGTTCCATTG 492
Query 45290 GTGACAAGGTAAAGAACGGCC--GTATCAAGCATCTGGGCAAGCACCCGATTTATGCTGC 45347
| || ||| ||| | ||| | ||||| || |||||||| || || | |
Sbjct 493 GCTCTCCTGTTAAGGGCGGTCAAGTAGC--TCATCTAGGTAAGCACCCTATCTACTCGAC 550
Query 45348 TGTAGACAAGTCGGTCAAGATGTTCACTCAGGTAAGCCGTGGCGGTTCCGCAACTATGAC 45407
|| ||||| | || || ||||| || || || ||||| || || || || ||| | ||
Sbjct 551 AGTGGACAAAGCTGTTAAAATGTTTACACAAGTTAGCCGAGGTGGCTCTGCTACTGTTAC 610
Query 45408 CTTCTCGGTGTAC-GACCCTGAGATTATGATGCTGTTGAAGCTCAAGTCACAG 45459
|| | ||||| |||||||||||| | |||||| ||| ||| |||||
Sbjct 611 ATT-TAACTGTACTGACCCTGAGATTGGCAAGCTGTTACTGCTTAAGACACAG 662
>seq518968
Length=328
Score = 96.9 bits (106), Expect = 1e-15
Identities = 116/156 (74%), Gaps = 4/156 (3%)
Strand=Plus/Minus
Query 3402 AGCCGACAAGTCCAACCGTGTCTACAAAGGTATCACCTTTGAAGCCGTTGGTGCCGGTGC 3461
|||||||||| |||||| |||| || |||||||| |||| || ||||| || ||
Sbjct 254 AGCCGACAAGGGCAACCGCATCTATCGTGGCATCACCTTCCAAGCTGTAGGTGCAGGCGC 195
Query 3462 GATGCACAAGGTAGTAGTTGGTGGCTCCTTCAACGAATAAGGATAACG-ATGAAACAGTA 3520
||| |||||||| || | |||||| ||| || ||| | ||| ||||| |||||
Sbjct 194 GATTCACAAGGTTGTTATCACTGGCTCGTTCTCGGAGTAA---TCACGCATGAAGCAGTA 138
Query 3521 TAGCTTTTACAACGTCGATCTTCTGGTCGACGGTAT 3556
| ||||||||||||| || || ||| | || |||||
Sbjct 137 TTGCTTTTACAACGTAGACCTGCTGTTGGATGGTAT 102
>seq491780
Length=454
Score = 89.7 bits (98), Expect = 2e-13
Identities = 103/136 (76%), Gaps = 2/136 (1%)
Strand=Plus/Plus
Query 52981 GATGTTCGTCTGACCGATGACGACGGCATCTTCTTCCAGCGTCAACTGGAAGCCATCGAA 53040
||||| |||||| | || | ||| ||| | |||||||| ||||||||||||| ||||| |
Sbjct 320 GATGTCCGTCTGTCTGACGCCGATGGCCTGTTCTTCCAACGTCAACTGGAAGTCATCG-A 378
Query 53041 GCTCA-GACTTACGATGTGCTCTATCCGGACCTGGAAGCTCGTAGCTGCTTCAAGACCAA 53099
|| | || ||||| || || ||||| ||||| |||||||| |||||| ||
Sbjct 379 GCAAACTACCTACGACGTCCTGTATCCAGACCTCGAAGCTCGCGAGTGCTTCCCTACTCT 438
Query 53100 CACCTTCGGCGGTGCT 53115
||| |||||||||||
Sbjct 439 GACCCTCGGCGGTGCT 454
>seq488020
Length=335
Score = 86.0 bits (94), Expect = 2e-12
Identities = 119/167 (71%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 48217 TTCGAGAAGTTCAGTAAGTGGTGCTTTGAAATCCAGATGGGTTTCAAGTTTCAGATGCAG 48276
|| |||| ||||| |||||| ||||| || |||||||| ||||||||||||||||||
Sbjct 169 TTTGAGATTTTCAGCAAGTGGGCTTTTGAGATTCAGATGGGCTTCAAGTTTCAGATGCAG 228
Query 48277 GATTTTCACTCGATTATATTTGAGTTCTGTCAGAAGATCGTCAATGGCGAAATAGACAGA 48336
|| |||||| || || ||| | | || || | || || | ||| | || ||
Sbjct 229 GACTTTCACAGCATCATCTTTCAAGTATGCCAAGATATTATCGACGGCAAGCGTGATCGA 288
Query 48337 GGCATTGTCTGCATCCCACCTCGGCACTCGAAGACTCAGATCCTGAG 48383
| || || ||||||||||||||| ||||| ||||| || ||
Sbjct 289 GTAATCGTGAACATCCCACCTCGGCATAGTAAGACGCAGATTCTCAG 335
>seq481550
Length=787
Score = 82.4 bits (90), Expect = 3e-11
Identities = 75/95 (79%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 39145 GGTGTGAACTGGCAGCGGAACCCTGTGTCAGGGATCTGGTACCACCTCAAGACCAACAAA 39204
||||| ||||||||| |||| ||| | || | | |||||| ||||||||| | ||
Sbjct 692 GGTGTCAACTGGCAGTGGAATCCTATCTCCAAGCTGTGGTACTTCCTCAAGACAGATAAG 751
Query 39205 GACCGGTTCTCAACACTGTGCCAAGGTACTGGTGC 39239
|| |||||||| ||| |||| ||||||||||||||
Sbjct 752 GATCGGTTCTCGACATTGTGTCAAGGTACTGGTGC 786
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 170786740804344
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |