Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_025462.1
Length=99730
Score E
Sequences producing significant alignments: (Bits) Value
seq434791 122 6e-23
seq512506 84.2 1e-11
seq449729 82.4 5e-11
>seq434791
Length=745
Score = 122 bits (134), Expect = 6e-23
Identities = 196/278 (71%), Gaps = 8/278 (3%)
Strand=Plus/Plus
Query 19931 AAAACAAACCCAACATCACGAAGATTAATTGTATCAGGTTGGAATCCTCATGATGTTGCA 19990
||| ||| ||||| ||| || | || ||||| || ||||||||||| ||| | ||
Sbjct 466 AAACCAATCCCAAT-TCAAGACGTTTGATTGTGTCTGGTTGGAATCCCGGTGAAG---CA 521
Query 19991 GATGTAGATT---TACCACCTTGCCATACACTATTTCAATTCTTTGTGAAAGATGGTAAA 20047
||| || | | || ||||| ||||| |||||||| ||||||||| ||| ||||
Sbjct 522 GATCAAGTTGCGCTGCCGCCTTGTCATACGCTATTTCAGTTCTTTGTGGCGGATAATAAA 581
Query 20048 TTATCTTGCCAGTTGTATCAACGAAGTGCTGACTTATTACTTGGTGTTCCATTTAATATT 20107
| || |||||| | ||||| || || || ||||| || ||||| || ||||| |||
Sbjct 582 CTGTCATGCCAGCTCTATCAGCGTTCAGCAGATTTATTCCTAGGTGTGCCGTTTAACATT 641
Query 20108 GCATCTTATGCTTTACTTACACACTTAGTTGCATTAGAATGTGGGCTTAATGTTGGTGAG 20167
|| ||||| ||||||| || | || || | ||||| || | || || ||
Sbjct 642 GCCAGCTATGCCCTACTTACCCATATGGTCGCGCAAATTTGTGGTCTAGAAGTGGGGGAA 701
Query 20168 TTTGTTTGGGTTGGTGGTGATTGCCACATTTACTCAAA 20205
|| | ||| |||||||||||||||||||| |||||
Sbjct 702 TTCATCTGGACAGGTGGTGATTGCCACATTTA-TCAAA 738
>seq512506
Length=396
Score = 84.2 bits (92), Expect = 1e-11
Identities = 96/129 (74%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 19994 GTAGATTTACCACCTTGCCATACACTATTTCAATTCTTTGTGAAAGATGGTAAATTATCT 20053
|||| || || |||||||| | | ||||| || | ||| || || ||||||||
Sbjct 259 GTAGCCTTGCCTCCTTGCCACGCCTTTTTTCAGTTTTATGTAGCTGAGGGGAAATTATCG 200
Query 20054 TGCCAGTTGTATCAACGAAGTGCTGACTTATTACTTGGTGTTCCATTTAATATTGCATCT 20113
|| || ||||| ||||||||||| || | || | || ||||| ||||| ||||| |||
Sbjct 199 TGTCAATTGTACCAACGAAGTGCCGATATTTTCTTGGGAGTTCCCTTTAACATTGCTTCT 140
Query 20114 TATGCTTTA 20122
|||||||||
Sbjct 139 TATGCTTTA 131
>seq449729
Length=611
Score = 82.4 bits (90), Expect = 5e-11
Identities = 57/65 (88%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 60075 GACTGTTGGTTGGTCGTAGCAGACTGTAAATCTGCCCTCACAAAGCATCATTGGTTCGAT 60134
|||| |||||||||| |||||||||||||||||||| |||||||| | ||||||| ||
Sbjct 155 GACTATTGGTTGGTCACAGCAGACTGTAAATCTGCCCCCACAAAGCGTTCTTGGTTCAAT 214
Query 60135 TCCAA 60139
|||||
Sbjct 215 TCCAA 219
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 316968075024602
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |