Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_025462.1 Length=99730 Score E Sequences producing significant alignments: (Bits) Value seq434791 122 6e-23 seq512506 84.2 1e-11 seq449729 82.4 5e-11 >seq434791 Length=745 Score = 122 bits (134), Expect = 6e-23 Identities = 196/278 (71%), Gaps = 8/278 (3%) Strand=Plus/Plus Query 19931 AAAACAAACCCAACATCACGAAGATTAATTGTATCAGGTTGGAATCCTCATGATGTTGCA 19990 ||| ||| ||||| ||| || | || ||||| || ||||||||||| ||| | || Sbjct 466 AAACCAATCCCAAT-TCAAGACGTTTGATTGTGTCTGGTTGGAATCCCGGTGAAG---CA 521 Query 19991 GATGTAGATT---TACCACCTTGCCATACACTATTTCAATTCTTTGTGAAAGATGGTAAA 20047 ||| || | | || ||||| ||||| |||||||| ||||||||| ||| |||| Sbjct 522 GATCAAGTTGCGCTGCCGCCTTGTCATACGCTATTTCAGTTCTTTGTGGCGGATAATAAA 581 Query 20048 TTATCTTGCCAGTTGTATCAACGAAGTGCTGACTTATTACTTGGTGTTCCATTTAATATT 20107 | || |||||| | ||||| || || || ||||| || ||||| || ||||| ||| Sbjct 582 CTGTCATGCCAGCTCTATCAGCGTTCAGCAGATTTATTCCTAGGTGTGCCGTTTAACATT 641 Query 20108 GCATCTTATGCTTTACTTACACACTTAGTTGCATTAGAATGTGGGCTTAATGTTGGTGAG 20167 || ||||| ||||||| || | || || | ||||| || | || || || Sbjct 642 GCCAGCTATGCCCTACTTACCCATATGGTCGCGCAAATTTGTGGTCTAGAAGTGGGGGAA 701 Query 20168 TTTGTTTGGGTTGGTGGTGATTGCCACATTTACTCAAA 20205 || | ||| |||||||||||||||||||| ||||| Sbjct 702 TTCATCTGGACAGGTGGTGATTGCCACATTTA-TCAAA 738 >seq512506 Length=396 Score = 84.2 bits (92), Expect = 1e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 19994 GTAGATTTACCACCTTGCCATACACTATTTCAATTCTTTGTGAAAGATGGTAAATTATCT 20053 |||| || || |||||||| | | ||||| || | ||| || || |||||||| Sbjct 259 GTAGCCTTGCCTCCTTGCCACGCCTTTTTTCAGTTTTATGTAGCTGAGGGGAAATTATCG 200 Query 20054 TGCCAGTTGTATCAACGAAGTGCTGACTTATTACTTGGTGTTCCATTTAATATTGCATCT 20113 || || ||||| ||||||||||| || | || | || ||||| ||||| ||||| ||| Sbjct 199 TGTCAATTGTACCAACGAAGTGCCGATATTTTCTTGGGAGTTCCCTTTAACATTGCTTCT 140 Query 20114 TATGCTTTA 20122 ||||||||| Sbjct 139 TATGCTTTA 131 >seq449729 Length=611 Score = 82.4 bits (90), Expect = 5e-11 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 60075 GACTGTTGGTTGGTCGTAGCAGACTGTAAATCTGCCCTCACAAAGCATCATTGGTTCGAT 60134 |||| |||||||||| |||||||||||||||||||| |||||||| | ||||||| || Sbjct 155 GACTATTGGTTGGTCACAGCAGACTGTAAATCTGCCCCCACAAAGCGTTCTTGGTTCAAT 214 Query 60135 TCCAA 60139 ||||| Sbjct 215 TCCAA 219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 316968075024602