Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_025463.1 Length=49640 Score E Sequences producing significant alignments: (Bits) Value seq523524 159 1e-34 >seq523524 Length=220 Score = 159 bits (176), Expect = 1e-34 Identities = 166/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 43833 ttttGCTAAAATAGTAGCGTTTAACAGCGTAAGTTTAATCATTATTCATGACCCTCAGTA 43892 |||||| || || ||||||||||||||||||||||| |||||||||| |||||||||||| Sbjct 220 TTTTGCCAAGATGGTAGCGTTTAACAGCGTAAGTTTGATCATTATTCGTGACCCTCAGTA 161 Query 43893 ATGGTAATAGTAATATGTGCTGGTGGGTTATCTGGTAAAGCACCCTTTTTTATGTACAGC 43952 || ||||| || || || | |||| | | ||||| ||||| |||||||| Sbjct 160 ATTGTAATGGTTATGTGATTTAGTGGCGTTTTGCCAAAAGCTTGTTTTTTAATGTACAGG 101 Query 43953 ACTGGTATGATAGCATCAGATTCACTTGTTGCCGCAGCATAAACATGAGTGCCTTTTGTT 44012 |||| ||| ||||| ||| | || |||||||| || || | ||| ||||| ||| Sbjct 100 GTCGGTACTATATCATCACTTTCGGTAGTGGCCGCAGCGTATACGTAAGTACCTTTGGTT 41 Query 44013 GATTTGGTTAAACTTAATTCTACTTTAATCATTTTCTA 44050 ||| |||||||||||| |||||||||||||| || Sbjct 40 TCTTTTACTAAACTTAATTCAACTTTAATCATTTTATA 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157735893892248