Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_025466.1 Length=40161 Score E Sequences producing significant alignments: (Bits) Value seq512719 203 8e-48 seq425690 131 4e-26 >seq512719 Length=379 Score = 203 bits (224), Expect = 8e-48 Identities = 180/225 (80%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 6446 AACGGCTACGTGTTTACCAATGGTTCTAGTATCGGTGTATCAACTGGCTATCGTGGTGGC 6505 || || || |||||||| ||||| || || || || |||||||| |||||||||||| Sbjct 235 AATGGTTATGTGTTTACTAATGGCTCATCAATTGGCGTGTCAACTGGTTATCGTGGTGGC 176 Query 6506 ACACTTCAAAGCTTGCATGTTTCGGAGTTCGGAAAGATATGCAAAAAGTATCCAGAGAAA 6565 ||||| ||| ||||| |||| ||||| || |||||||| |||||||||||||| || Sbjct 175 ACACTGCAATCACTGCATATTTCAGAGTTTGGTAAGATATGTAAAAAGTATCCAGAAAAG 116 Query 6566 GCACAGGAGATTGTTACAGGTGCGTTTAACTCAGTAGGCAAGAATGGCACGATAACAATC 6625 || |||||||||| || ||||| ||||||||||| ||||||||| |||||| ||||| Sbjct 115 GCCAAGGAGATTGTGACGGGTGCTTTTAACTCAGTGGGCAAGAATTGCACGAAGACAATT 56 Query 6626 GAAAGTACCGCAGAGGGTAAGCAGGGTTACTATTATGACTATTGC 6670 ||| || |||||||||||||| ||||| | || ||||| ||| Sbjct 55 GAATCAACGGCAGAGGGTAAGCAAGGTTATTTCTACGACTACTGC 11 >seq425690 Length=473 Score = 131 bits (144), Expect = 4e-26 Identities = 183/250 (73%), Gaps = 14/250 (6%) Strand=Plus/Plus Query 6426 CACCAAGGAATGACAAAGATAACGGCTACGTGTTTACCAATGGTTCT--AGTATCGGT-- 6481 |||||| || || |||||||||||||||||||| || || || | || |||| Sbjct 53 CACCAATAAACGATAAAGATAACGGCTACGTGTTCGATAACGGCTCATCAATAGCGGTTA 112 Query 6482 GTATCAACTGGCTATCGTGGTGGCACACTTCAAAGCTTGCATGTTTCGGAGTTCGGAAAG 6541 ||| || | |||||||| ||||| || |||||||||||| | || ||||| || ||| Sbjct 113 GTA-CATCA---TATCGTGGCGGCACTCTACAAAGCTTGCATATATCTGAGTTTGGTAAG 168 Query 6542 ATATGCAAAAAGTATCCAGAGAAAGCACAGGAGATTGTTACAGGTGCGTTTAACTCAGTA 6601 ||||| |||||||| || |||||||| | |||||||| || ||||||||| | | || Sbjct 169 ATATGTAAAAAGTACCCTGAGAAAGCCAAAGAGATTGTAACCGGTGCGTTTGAAGCTGT- 227 Query 6602 GGCAAGAATGGCA---CGATAACAATCGAAAGTACCGCAGAGGGTAAGCAGGGTTACTAT 6658 ||| | ||||| || ||||| || || ||||||||||| | ||||||| Sbjct 228 GGC--GGTTGGCAATGTAATCACAATAGAGTCAACGGCAGAGGGTAAAGAAGGTTACTTC 285 Query 6659 TATGACTATT 6668 || || |||| Sbjct 286 TACGATTATT 295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127592380763652