Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_025466.1
Length=40161
Score E
Sequences producing significant alignments: (Bits) Value
seq512719 203 8e-48
seq425690 131 4e-26
>seq512719
Length=379
Score = 203 bits (224), Expect = 8e-48
Identities = 180/225 (80%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 6446 AACGGCTACGTGTTTACCAATGGTTCTAGTATCGGTGTATCAACTGGCTATCGTGGTGGC 6505
|| || || |||||||| ||||| || || || || |||||||| ||||||||||||
Sbjct 235 AATGGTTATGTGTTTACTAATGGCTCATCAATTGGCGTGTCAACTGGTTATCGTGGTGGC 176
Query 6506 ACACTTCAAAGCTTGCATGTTTCGGAGTTCGGAAAGATATGCAAAAAGTATCCAGAGAAA 6565
||||| ||| ||||| |||| ||||| || |||||||| |||||||||||||| ||
Sbjct 175 ACACTGCAATCACTGCATATTTCAGAGTTTGGTAAGATATGTAAAAAGTATCCAGAAAAG 116
Query 6566 GCACAGGAGATTGTTACAGGTGCGTTTAACTCAGTAGGCAAGAATGGCACGATAACAATC 6625
|| |||||||||| || ||||| ||||||||||| ||||||||| |||||| |||||
Sbjct 115 GCCAAGGAGATTGTGACGGGTGCTTTTAACTCAGTGGGCAAGAATTGCACGAAGACAATT 56
Query 6626 GAAAGTACCGCAGAGGGTAAGCAGGGTTACTATTATGACTATTGC 6670
||| || |||||||||||||| ||||| | || ||||| |||
Sbjct 55 GAATCAACGGCAGAGGGTAAGCAAGGTTATTTCTACGACTACTGC 11
>seq425690
Length=473
Score = 131 bits (144), Expect = 4e-26
Identities = 183/250 (73%), Gaps = 14/250 (6%)
Strand=Plus/Plus
Query 6426 CACCAAGGAATGACAAAGATAACGGCTACGTGTTTACCAATGGTTCT--AGTATCGGT-- 6481
|||||| || || |||||||||||||||||||| || || || | || ||||
Sbjct 53 CACCAATAAACGATAAAGATAACGGCTACGTGTTCGATAACGGCTCATCAATAGCGGTTA 112
Query 6482 GTATCAACTGGCTATCGTGGTGGCACACTTCAAAGCTTGCATGTTTCGGAGTTCGGAAAG 6541
||| || | |||||||| ||||| || |||||||||||| | || ||||| || |||
Sbjct 113 GTA-CATCA---TATCGTGGCGGCACTCTACAAAGCTTGCATATATCTGAGTTTGGTAAG 168
Query 6542 ATATGCAAAAAGTATCCAGAGAAAGCACAGGAGATTGTTACAGGTGCGTTTAACTCAGTA 6601
||||| |||||||| || |||||||| | |||||||| || ||||||||| | | ||
Sbjct 169 ATATGTAAAAAGTACCCTGAGAAAGCCAAAGAGATTGTAACCGGTGCGTTTGAAGCTGT- 227
Query 6602 GGCAAGAATGGCA---CGATAACAATCGAAAGTACCGCAGAGGGTAAGCAGGGTTACTAT 6658
||| | ||||| || ||||| || || ||||||||||| | |||||||
Sbjct 228 GGC--GGTTGGCAATGTAATCACAATAGAGTCAACGGCAGAGGGTAAAGAAGGTTACTTC 285
Query 6659 TATGACTATT 6668
|| || ||||
Sbjct 286 TACGATTATT 295
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 127592380763652
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |