Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_025829.1
Length=164999
Score E
Sequences producing significant alignments: (Bits) Value
seq449735 178 1e-39
seq506238 143 3e-29
seq509673 109 6e-19
seq351952 105 7e-18
seq487923 89.7 5e-13
seq326422 89.7 5e-13
seq128994 84.2 2e-11
>seq449735
Length=3187
Score = 178 bits (196), Expect = 1e-39
Identities = 400/593 (67%), Gaps = 15/593 (3%)
Strand=Plus/Minus
Query 143635 AACAGTTCACGGGCTTTAATACGCTTTTTACGAAT--ATTAGGGTCTTTTTCTGCGGCTT 143692
||||||||| |||||||| || ||||||||||| ||| | |||| ||| |
Sbjct 611 AACAGTTCAATAGCTTTAATGCGTTTTTTACGAATTGATTCG--TCTTGTTCGTATTTTA 554
Query 143693 CGTATAATTCACGG-AAACG-GTCTTGGTCTTTAAAATAAGAATAATAAAGTTCGCCACC 143750
| |||| | || |||| ||||||||||| |||| | | || ||||| |||
Sbjct 553 C--ATAAAGCGCGTCAAACTCGTCTTGGTCTTCAAAAAATGCATCGTAAAG---GCCTGG 499
Query 143751 CATTTCATGCGGACTGAACAAAGTAATGTAATCATTCTTTCCGAATCGTTCCATCATTAG 143810
|| ||| || || ||||| |||||||| || | || || || ||||||
Sbjct 498 CACATCAGAGGGGCTAAACAAGGTAATGTAGTCGTCTTTAATTAAACGCGAGTACATTAG 439
Query 143811 GTCATTCAGTTGAACGCCATAATCCATATGACGGATACGGTTTTCTTCTACACCTTTGTT 143870
| ||| | || ||||| ||||| | |||||| | ||||| || || || || |||
Sbjct 438 TTTATTAAACTGTACGCCGTAATCTAAATGACGCACGCGGTTGTCATCAACCCCGCGGTT 379
Query 143871 ATTTTTCAAAACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATA--ATAAGCAGTA 143928
|||||| | || | || ||||| ||||| |||||||||| || || | ||| ||
Sbjct 378 ATTTTTAAGTACTAACAGGTTTTCTACTTCTAAATGCCAAAGCGGGTAGAACAAG--GTT 321
Query 143929 GCAGCGCCGCCACGAATTCCACCCTGTGAACATGATTTAACTGCAGTCTGAAAATGTTTC 143988
|| ||||||||||| | || || || ||||| |||||| || || ||||| || ||
Sbjct 320 GCTGCGCCGCCACGTACACCGCCTTGCGAACAGCTTTTAACCGCTGTTTGAAAGTGCTTA 261
Query 143989 CAAAAAGGAATAACACCAGTATGACGCACTTCACCCATTCCAATCTTAGAACCTTCGGCA 144048
||||||||||| ||| ||||| | |||| || | | ||| | ||| |||
Sbjct 260 TAAAAAGGAATACAACCCGTATGGTACGCTTCGCCATTGCGAATGTGGCTACCCAGTGCA 201
Query 144049 CGAATCATACCAACGTTAATACCAATTCCAGCGCGTTTGGAGATATATTCAACAATTGAA 144108
||||| ||| ||||||| ||||| || || |||| || | |||| |||||||| |
Sbjct 200 CGAATGCGACCTGCGTTAATGCCAATGCCGGCACGTTGCGATACGTATTTAACAATTGCA 141
Query 144109 GCAGAAGCCTTATTGATAGACTTTAATGAATCACCTGCCTCAATAACAACGCATGAACTA 144168
| || | || || || | | || || ||| || | || || || |||
Sbjct 140 GACGAGGTGGCGTTAATTGAATCAAGGCTGTCGCCACACTCTATTAATACACACGAGCTA 81
Query 144169 AACTGCCGAGTTGGAGTACGGCAACCAGCCATAATAGGGGTTGGCAGTGAAAT 144221
||||| || ||||| ||||| ||| |||||||| || || || ||||||||
Sbjct 80 AACTGGCGTGTTGGCGTACGAACACCTGCCATAATTGGCGTAGGTAGTGAAAT 28
>seq506238
Length=275
Score = 143 bits (158), Expect = 3e-29
Identities = 142/184 (77%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 65096 ATTACAAGCTCTCAGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAG 65155
||||||| | || ||||| ||||| | | ||||| |||| ||||| || || | |
Sbjct 38 ATTACAATGTTTCTGTAAATGTACGTGTTAATACGTCTTGCTGTTGTTCTGGTGTTAATG 97
Query 65156 AGTTAAAGCGAACTGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGAT 65215
||||||| || ||||| ||||| |||||||| || || | || ||||||||||| || |
Sbjct 98 AGTTAAAACGCACTGCGTAACCTGATACACGAATAGTTAATTGTGGATATTTTTCAGGGT 157
Query 65216 GCTTAACTGCATCTTCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGACCAC 65275
| ||||| |||||||||| ||||||||||| | || || ||||| | ||||||||||
Sbjct 158 GTTTAACAGCATCTTCCAATGTTTCACGACGTAACACATTCACGTTTAAATGTTGACCAC 217
Query 65276 CTTC 65279
||||
Sbjct 218 CTTC 221
>seq509673
Length=441
Score = 109 bits (120), Expect = 6e-19
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 143821 TGAACGCCATAATCCATATGACGGATACGGTTTTCTTCTACACCTTTGTTATTTTTCAAA 143880
|| ||||| |||||||||||||||| |||||| ||||| || || |||||||||||
Sbjct 228 TGTACGCCGTAATCCATATGACGGACACGGTTGTCTTCCACGCCGCGGTTATTTTTCAGT 287
Query 143881 ACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCA 143940
|| | | |||||||| |||||||| | || ||| | || || || ||||||
Sbjct 288 ACCAATAATGACTCAACTTCTAAATGCCATAATGGGTAAAACAACGTCGCTGCACCGCCA 347
Query 143941 CGAATTCCACCCTGTGAACATGATTTAACTGCAGTCTGAAAATGTTTCCAAAAAGGAATA 144000
|| | || || ||||| || ||||||| ||||| || || |||| | || || |||
Sbjct 348 CGGACGCCGCCTTGTGAGCAGCATTTAACAGCAGTTTGGAACAGTTTATAGAATGGGATA 407
Query 144001 ACACCAGTATGACGCACTTCACC 144023
||| ||||| || |||| ||
Sbjct 408 CAACCCGTATGCTGCGCTTCGCC 430
>seq351952
Length=416
Score = 105 bits (116), Expect = 7e-18
Identities = 127/173 (73%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 65110 GTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGAGTTAAAGCGAACT 65169
||||||||||| | ||| || || ||| ||||| | ||| | |||||||| || |||
Sbjct 34 GTAAAGGTACGTGTGATTACATCTTGCTTTTGTTCTGCAGTTAACGAGTTAAATCGTACT 93
Query 65170 GCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATGCTTAACTGCATCT 65229
|| ||||| |||||||| || || | || ||||| || || |||| | | ||||||
Sbjct 94 GCGTAACCCGATACACGAATTGTTAATTGTGGATACTTATCTGGATTTTCCATTGCATCC 153
Query 65230 TCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGACCACCTTCAAT 65282
| ||||||| || || |||||||| | ||||||||||||||||||
Sbjct 154 AATAACATTTCACGGTTCATTACATTAACGTTTAAGTGTTGACCACCTTCAAT 206
>seq487923
Length=1072
Score = 89.7 bits (98), Expect = 5e-13
Identities = 146/202 (72%), Gaps = 9/202 (4%)
Strand=Plus/Minus
Query 28329 ATACTAATTTATCTAGTACGTATTTTTGCCATGCATAATCATTACGGAATCCGAAGACCA 28388
||| |||||||| || | || || |||||||| ||||||||| |||||||| ||
Sbjct 528 ATAGTAATTTATATA---CATACTTATGCCATGCTAAATCATTACCAAATCCGAATACTG 472
Query 28389 CGTCATTTGAACGCATGCTT-ACTAC-TGCATTGACTTTCTTATCACGAATCAGGTACT- 28445
||||| ||| ||| || || || | | ||| | ||| ||||||||||| | ||||
Sbjct 471 CGTCACATGAGCGC-TGATTGACAATATAGATTAA-TTTATTATCACGAATAAA-TACTT 415
Query 28446 GTACTGTATTCGTACACATGAAATCTGACATACCATCTTTATTGTAGTCAAACTGCATGG 28505
| || |||| ||||| || ||||||||||| ||| |||| | ||| || || |
Sbjct 414 GAACATTATTAGTACAAATAAAATCTGACATTTCATTAGTATTCCATTCACTTTGAATAG 355
Query 28506 ATGGACGAGTATAAATCATGAT 28527
| || | |||||||||||| ||
Sbjct 354 AAGGTCTAGTATAAATCATAAT 333
>seq326422
Length=2068
Score = 89.7 bits (98), Expect = 5e-13
Identities = 91/115 (79%), Gaps = 4/115 (3%)
Strand=Plus/Plus
Query 74104 GCGCTCTACCAAACTGAGCTACAC--GGAGTAAATTAAATTGGAGCGGATAATGAGAATC 74161
|||||||||||| |||||||| | | | | |||| |||||||| | | |||||
Sbjct 291 GCGCTCTACCAA-CTGAGCTATATCAGCATCACCATAAACTGGAGCGGGCAGCGGGAATC 349
Query 74162 GAACTCACATCATCAGATTGGAAGTCTGAGGTAAT-GCCATTATACGATATCCGC 74215
|||| | ||||||||| ||||||| |||||||||| ||||||||||||| ||||
Sbjct 350 GAACCCGCATCATCAGCTTGGAAGGCTGAGGTAATAGCCATTATACGATGCCCGC 404
>seq128994
Length=861
Score = 84.2 bits (92), Expect = 2e-11
Identities = 119/165 (72%), Gaps = 2/165 (1%)
Strand=Plus/Plus
Query 142033 TCATCGTAAT-AGCGACCAATGGACTCGGCACGTTTCATAATATCTTCATCTAATACAAT 142091
|||||||||| |||| |||| ||||||| || | ||| || |||| | ||||||
Sbjct 576 TCATCGTAATAAGCG-GCAATATCACCGGCACGCTTTAAAATTTCATCATTTTGTACAAT 634
Query 142092 CTCATCAAATACCTTTGACGGATCAGTATAAAGATTTCGCATAATATGAGTATATGAACG 142151
|| ||||||||| || || | | || || ||| || ||||| ||||| || |||||
Sbjct 635 ATCGTCAAATACCAAAGATGGGTTATTAACAATATTACGAATAATGTGAGTGTACGAACG 694
Query 142152 GCTGTGAATAGTTTCACTAAAAGTCCATGTAGCAACCCATGTATC 142196
|||||| |||||| ||| | |||||| ||| ||| || ||
Sbjct 695 CGAGTGAATGGTTTCAGAAAACGACCATGTTTCAATCCACGTTTC 739
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 524401348623280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |