Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_025830.1
Length=120938
Score E
Sequences producing significant alignments: (Bits) Value
seq506238 129 5e-25
seq351952 89.7 4e-13
>seq506238
Length=275
Score = 129 bits (142), Expect = 5e-25
Identities = 130/169 (77%), Gaps = 0/169 (0%)
Strand=Plus/Minus
Query 109107 GTGGTCAACATCTGAACGTTAACGTTCTGCGTCGGGAAACTCTGGAAGATGCAGTTAAGC 109166
||||||||||| | ||||| || || | ||||| ||||| |||||||||| ||||| |
Sbjct 217 GTGGTCAACATTTAAACGTGAATGTGTTACGTCGTGAAACATTGGAAGATGCTGTTAAAC 158
Query 109167 ATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTTAACT 109226
| || ||||||||||| || | || || |||||||| ||||| ||||| || |||||||
Sbjct 157 ACCCTGAAAAATATCCACAATTAACTATTCGTGTATCAGGTTACGCAGTGCGTTTTAACT 98
Query 109227 CTCTGACTCCGGAACAGCAGCGCGACGTTATCGCTCGTACCTTTACTGA 109275
| | || || ||||| |||| ||||| | | ||||| ||||| ||
Sbjct 97 CATTAACACCAGAACAACAGCAAGACGTATTAACACGTACATTTACAGA 49
>seq351952
Length=416
Score = 89.7 bits (98), Expect = 4e-13
Identities = 127/179 (71%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 109107 GTGGTCAACATCTGAACGTTAACGTTCTGCGTCGGGAAACTCTGGAAGATGCAGTTAAGC 109166
|||||||||| | |||||||| || || || |||| | |||||| | |
Sbjct 199 GTGGTCAACACTTAAACGTTAATGTAATGAACCGTGAAATGTTATTGGATGCAATGGAAA 140
Query 109167 ATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTTAACT 109226
|||| || || ||||| || | || || |||||||| ||||| ||||| || |||||||
Sbjct 139 ATCCAGATAAGTATCCACAATTAACAATTCGTGTATCGGGTTACGCAGTACGATTTAACT 80
Query 109227 CTCTGACTCCGGAACAGCAGCGCGACGTTATCGCTCGTACCTTTACTGAGAGTCTATAA 109285
| | ||| | ||||| ||| || || ||| | ||||||||||| | || ||||||
Sbjct 79 CGTTAACTGCAGAACAAAAGCAAGATGTAATCACACGTACCTTTACAGCGACGCTATAA 21
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 384399026014378
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |