Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq83969 98.7 3e-17
seq3133 98.7 3e-17
seq3132 98.7 3e-17
seq34014 95.1 4e-16
seq116291 86.0 2e-13
seq219663 78.8 3e-11
>seq83969
Length=576
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 321 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 380
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 381 CCGGGTTTCGGC 392
>seq3133
Length=356
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 81 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 140
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 141 CCGGGTTTCGGC 152
>seq3132
Length=445
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 81 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 140
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 141 CCGGGTTTCGGC 152
>seq34014
Length=516
Score = 95.1 bits (104), Expect = 4e-16
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 196 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 137
Query 2829 CCGGGCTTCAGC 2840
||| | ||| ||
Sbjct 136 CCGAGTTTCGGC 125
>seq116291
Length=414
Score = 86.0 bits (94), Expect = 2e-13
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| ||||||| ||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 148 GCCGAAATAGCTCATTTGGGAGAGTGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 207
Query 2829 CCGGGCTTCAGC 2840
|| || ||| ||
Sbjct 208 CCTGGTTTCGGC 219
>seq219663
Length=557
Score = 78.8 bits (86), Expect = 3e-11
Identities = 54/61 (89%), Gaps = 0/61 (0%)
Strand=Plus/Minus
Query 2772 GAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCG 2831
||| ||||||||||||||||| ||||| |||||||| ||||||||||||||| | ||||
Sbjct 117 GAAATAGCTCAGTTGGGAGAGAGTTAGAGTGAAGATCGAAAGGTCCCTGGTTCGATCCCG 58
Query 2832 G 2832
|
Sbjct 57 G 57
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15758501600790
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |