Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq44246 154 2e-31
seq70662 141 1e-27
seq75492 140 5e-27
seq443314 100 4e-15
seq70661 96.9 5e-14
seq6431 91.5 2e-12
seq86481 87.8 3e-11
seq103378 86.0 9e-11
>seq44246
Length=4029
Score = 154 bits (170), Expect = 2e-31
Identities = 207/288 (72%), Gaps = 0/288 (0%)
Strand=Plus/Plus
Query 259898 TCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCG 259957
||| || ||| ||||||| || | ||||||||||| || || || || || ||
Sbjct 430 TCGGAGAAGTGGTTCACCCACGCCTCCCCCACGCTCTTCAACGCAGGAACCAACCGGCCT 489
Query 259958 CAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGAC 260017
||| || ||||| ||| | |||||||| ||| |||||||||||||| |||
Sbjct 490 CAGCTCTCCAGCTGCTTCCTGCTCACCATGAAGGACGACAGCATCGAGGGCATCTACGAC 549
Query 260018 ACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACAC 260077
||||| |||||||| || |||||||||||| |||| || || |||||| | |||| |
Sbjct 550 ACGCTGAAGCAGTGTGCACTCATCTCCAAGTCGGCAGGAGGAATCGGTGTGGCCGTCAGC 609
Query 260078 AAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTG 260137
| || || | || |||| | || |||||||||||| | |||||||| || ||
Sbjct 610 TGCATCCGATCCACCGGGAGCTACATCGCCGGCACCAACGGCAACTCCAACGGGCTGGTC 669
Query 260138 CCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAGTGC 260185
|||||||| | || | ||| |||| || ||||| ||||||||| ||
Sbjct 670 CCCATGCTGAGGGTCTACAACAACACAGCACGCTATGTCGACCAGGGC 717
Score = 107 bits (118), Expect = 3e-17
Identities = 292/450 (65%), Gaps = 26/450 (6%)
Strand=Plus/Plus
Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847
|||||| |||||| |||||||| ||| |||||||| ||||||||| ||| |
Sbjct 715 GGCGGCAACAAGCGACCCGGCGCCTTCGCCATGTACCTGGAGCCGTGGCACTTTGACGTG 774
Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907
|| ||| ||||| || || |||||| |||| | ||||| | ||| | || |
Sbjct 775 TTCGACTTCCTGGAGCTGAAGAAGAAC-ACGGGGAAGGAGGAGCAGA-----GAGCCAGA 828
Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGC 261967
|||||||| |||||| |||||| ||||||||| ||| | ||| || | ||
Sbjct 829 GATCTCTTCTACGGCTTGTGGATCCCCGACCTGTTCATGAAGAGGGTGGAGAGCAACCAG 888
Query 261968 GACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCC 262027
|||||||| || | || || |||| ||||| ||| |||| |||| || | ||
Sbjct 889 GACTGGTCTCTGATGTGTCCCAGCGAGAGCCCCGGGCTGGACGAGTGCTGGGGGGAGGAG 948
Query 262028 TTTGA---------CGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCGCGGACCGTC 262078
||||| | ||| |||||| ||| ||
Sbjct 949 TTTGAGAAGCTCTACACCCAATATGAGCGGGAGGGCCGGGTCAA------GCGT---GTG 999
Query 262079 GTGCCCGCACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCC 262138
||| || | ||| | ||| ||||| ||| | |||| | ||| | ||||||||
Sbjct 1000 GTGAAGGCTCAGCAGGTGTGGCACGCCATCATCGAGTCCCAGACGGAGTCGGGCACGCCG 1059
Query 262139 TACATGGTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCACG 262198
|||||| | ||||| |||||| |||| || |||||||||||||||||||| ||||
Sbjct 1060 TACATGCTGTACAAAGACGCCTGCAACAGGAAGAGCAACCAGCAGAACCTGGGAACCATC 1119
Query 262199 ACAGAG-GCCAACCTGTGCACCGAGATCGT 262227
| || | |||||| ||||| || |||||
Sbjct 1120 A-AGTGCAGCAACCTCTGCACGGAAATCGT 1148
Score = 104 bits (114), Expect = 3e-16
Identities = 134/185 (72%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 262913 AGCATGGCCTGCGCAACTCGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGA 262972
|||| ||| || | ||| |||| |||| | |||||||||||| | || | ||||
Sbjct 1618 AGCACGGCGTGAGGAACAGCCTGCTGCTGGCCCCGATGCCCACGGCCTCCACCGCCCAGA 1677
Query 262973 TCCTGGGCAACACCGAGGCGTTCGAGGTCATCACGAGCAACATCTACACGCGCCGCGTGC 263032
|||||||||||| |||| | |||||| | ||| |||||||||||||| ||||| || |
Sbjct 1678 TCCTGGGCAACAACGAGTCCATCGAGGCCTACACCAGCAACATCTACACCCGCCGGGTCC 1737
Query 263033 TCTCGGGCGACTTTACCGTGGTCAACCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCC 263092
| || || || || | ||||||| ||| ||| ||||| | || || | | || |
Sbjct 1738 TGTCAGGAGAGTTCCAGATCGTCAACCCCCATCTGCTCAAGGACCTGACGGAGAGAGGGC 1797
Query 263093 TGTGG 263097
|||||
Sbjct 1798 TGTGG 1802
>seq70662
Length=316
Score = 141 bits (156), Expect = 1e-27
Identities = 166/223 (74%), Gaps = 6/223 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| || |||| |||||||| | |||||
Sbjct 100 TACAAGGTGCTGAAGCAGGTCCACCCCGACAC---TGGGATCTCCTCCAA---GGCCATG 153
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || || | |||||| |||| ||||||| | |||||| |||
Sbjct 154 GGCATCATGAACTCCTTCGTGAGCGACATCTTCGAGCGCATCGCCGGTGAGGCCTCTCGT 213
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||| | || |||||||||| ||| ||| | | | ||||| ||||||||||| |||
Sbjct 214 CTGGCTCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATTCAGACCGCCGTCCGC 273
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGG 725136
||| | ||| ||| || ||||| | |||||||| || ||||
Sbjct 274 CTGCTGCTGCCCGGGGAGCTGGCTAAACACGCCGTGTCTGAGG 316
>seq75492
Length=1479
Score = 140 bits (154), Expect = 5e-27
Identities = 169/229 (74%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| ||| |||| ||| |||| |||||
Sbjct 1125 TACAAGGTGCTGAAGCAGGTGCACCCCGACACCAG-----CATC-TCCTTCAAGGCCATG 1072
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
| |||||||||| || || | ||||| |||| ||||||| | |||||| |||
Sbjct 1071 GAGGTCATGAACTCCTTCGTGATGGACATCTTCGAGCGCATCGCCGGAGAGGCCTCCCGC 1012
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||| | || |||||| | | ||| ||| | | || || |||||||||||||| |||
Sbjct 1011 CTGGCTCACTACAACAATCACTCCACCATCACCTCCCGGGATATCCAGACCGCCGTCCGC 952
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|| | ||| ||| || ||||| |||||||| |||||||||||||
Sbjct 951 ATGCTGCTGCCCGGGGAGCTGGCATTACACGCCGTGTCCGAGGGCACCA 903
>seq443314
Length=301
Score = 100 bits (110), Expect = 4e-15
Identities = 113/150 (75%), Gaps = 6/150 (4%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| |||| |||| ||| |||| |||||
Sbjct 156 TACAAGGTGCTGAAGCAGGTGCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 209
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || || | |||||| |||| ||||||| | |||||| |||
Sbjct 210 GGCATCATGAACTCCTTCGTGAGCGACATCTTCGAGCGCATCGCCGGGGAGGCCTCCCGC 269
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATC 725063
||||| | || |||||||||| ||| |||
Sbjct 270 CTGGCTCACTACAACAAGCGCTCCACCATC 299
>seq70661
Length=246
Score = 96.9 bits (106), Expect = 5e-14
Identities = 112/150 (75%), Gaps = 6/150 (4%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| || |||| |||||||| | |||||
Sbjct 100 TACAAGGTGCTGAAGCAGGTCCACCCCGACAC---TGGGATCTCCTCCAA---GGCCATG 153
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || || | |||||| |||| ||||||| | |||||| |||
Sbjct 154 GGCATCATGAACTCCTTCGTGAGCGACATCTTCGAGCGCATCGCCGGTGAGGCCTCTCGT 213
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATC 725063
||||| | || |||||||||| ||| |||
Sbjct 214 CTGGCTCACTACAACAAGCGCTCCACCATC 243
>seq6431
Length=248
Score = 91.5 bits (100), Expect = 2e-12
Identities = 112/150 (75%), Gaps = 6/150 (4%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| || |||| |||||||| || |||||
Sbjct 102 TACAAGGTGCTGAAGCAGGTCCACCCCGACAC---TGGGATCTCCTCCAA--AG-CCATG 155
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || || | |||||| |||| ||||||| | |||||| |||
Sbjct 156 GGCATCATGAACTCCTTCGTGAGCGACATCTTCGAGCGCATCGCCGGTGAGGCCTCTCGT 215
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATC 725063
||||| | | |||||||||| ||| |||
Sbjct 216 CTGGCTCATTACAACAAGCGCTCCACCATC 245
>seq86481
Length=4042
Score = 87.8 bits (96), Expect = 3e-11
Identities = 88/112 (79%), Gaps = 2/112 (2%)
Strand=Plus/Plus
Query 1813106 CGGTTAAAGCCGTGCCGCGTGACGGCCACCAC-TGAGCCGCGGCAACACATGGTGTCGGT 1813164
||||| | |||||| ||||||| ||||| || ||| |||||||| |||||||||
Sbjct 701 CGGTTGATGCCGTGACGCGTGATGGCCATCAGGTGA-CCGCGGCAGGTCATGGTGTCACA 759
Query 1813165 GGCCAGCGCAAAGTGGCGGTCGTTGACATAGGTGCCGTCAAAGGAGATCACG 1813216
| ||| || ||||| |||| |||||| |||| |||||||||||||| |||
Sbjct 760 GAGCAGAGCCAAGTGACGGTAGTTGACGTAGGAACCGTCAAAGGAGATGACG 811
>seq103378
Length=1867
Score = 86.0 bits (94), Expect = 9e-11
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 262091 CAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTAC 262150
||| | |||| ||||| ||| | | || | || || || ||||| |||||| |||||
Sbjct 1640 CAGCTGTGGTACGCCATCATCGAGTCACAGACTGAAACGGGTACGCCGTACATGCTCTAC 1699
Query 262151 AAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCACGACAGAGGCCAAC 262210
||||||||| |||| || |||||||||||||| ||||| |||| | | |||
Sbjct 1700 AAGGACGCCTGCAACGGGAAGAGCAACCAGCAGAATCTGGGAACCATCAAATCCAGCAAT 1759
Query 262211 CTGTGCACCGAGATCGT 262227
|||||||| ||||| ||
Sbjct 1760 CTGTGCACAGAGATAGT 1776
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7127125566227324
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |