Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq152719 120 3e-22
seq6427 105 6e-18
seq152718 98.7 9e-16
seq59939 95.1 1e-14
>seq152719
Length=2073
Score = 120 bits (132), Expect = 3e-22
Identities = 141/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
|| || || ||||| ||||| | || ||| || | || ||||||||||| || |||||
Sbjct 536 TCTTTCTGGATGTTATAATCTGACATGGTGCGACCATCTTCCAGCTGCTTGCCGGCAAAG 595
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|||| || |||||| || | ||| | || |||||| ||| |||||| || | | |
Sbjct 596 ATCAGCCTCTGCTGATCAGGAGGGATGCCCTCCTTATCCTGGATCTTAGCTTTTACATTC 655
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | |||||||| | ||| ||||||| ||||| || ||||| |||| || ||||||
Sbjct 656 TCAATGGTGTCGCTGGGTTCAACCTCCAGAGTGATAGTCTTACCAGTCAGGGTCTTCACA 715
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 716 AAGATCTGCAT 726
Score = 116 bits (128), Expect = 3e-21
Identities = 141/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| || || |||||||| |||| | || || |||| ||||||||||| || |||||
Sbjct 79 CTCTTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCTTCCAGCTGCTTGCCGGCAAA 138
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| || |||||| || | ||| | || |||||| ||| |||||| || | | |
Sbjct 139 GATCAGCCTCTGCTGATCAGGAGGGATGCCCTCCTTATCCTGGATCTTAGCTTTGACATT 198
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | |||||||| | ||| ||||||| ||||| | ||||| |||| || |||||
Sbjct 199 CTCAATGGTGTCGCTGGGTTCAACCTCCAGAGTGATGGACTTACCAGTCAGGGTCTTCAC 258
Query 35725 AAATATCTGCAT 35736
||| ||||||||
Sbjct 259 AAAGATCTGCAT 270
Score = 95.1 bits (104), Expect = 1e-14
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| || || |||||||| |||| | || || |||| ||||||||||| || |||||
Sbjct 307 CTCTTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCTTCCAGCTGCTTGCCGGCAAA 366
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | || ||||||||| | ||| | || ||||| ||| |||||| || | | |
Sbjct 367 GATGAGCCTCTGCTGGTCTGGAGGGATGCCTTCCTTATCCTGGATCTTAGCTTTGACATT 426
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | |||||| | | ||| ||| ||| ||||| || || || || | || |||||
Sbjct 427 CTCAATGGTGTCGTTGGGTTCAACCACCAGAGTGATAGTCTTGCCTGTGAGGGTCTTCAC 486
Query 35725 AAATATCTGCAT 35736
||| ||||| ||
Sbjct 487 AAAGATCTGAAT 498
>seq6427
Length=3314
Score = 105 bits (116), Expect = 6e-18
Identities = 124/168 (74%), Gaps = 0/168 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| |||| | ||| || | || ||||||||||| || |||||
Sbjct 3143 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAA 3202
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| || |||||| || | |||| || ||||||||| |||||| ||| | | |
Sbjct 3203 GATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATT 3262
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712
| | | |||||||| | || ||||||| ||||| || || |||||
Sbjct 3263 TTCGATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGTCTTGCCCGT 3310
>seq152718
Length=3078
Score = 98.7 bits (108), Expect = 9e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| || || ||| |||| |||| | || || | || ||||||||||| || |||||
Sbjct 2182 CTCTTTCTGGATGCTGTAGTCGGAGAGAGTGCGACCATCTTCCAGCTGCTTGCCGGCAAA 2241
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| || | ||| || ||||| | || ||||| ||| ||||| || | | |
Sbjct 2242 GATCAGCCTGTACTGTTCAGAAGGGATGCCTTCCTTATCCTGAATCTTAACTTTGACATT 2301
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | |||||||| | ||| ||||||| ||||| || ||||| |||| || |||||
Sbjct 2302 CTCAATGGTGTCGCTGGGTTCAACCTCCAGAGTGATGGTCTTACCAGTCAGGGTCTTCAC 2361
Query 35725 AAATATCTGCAT 35736
||| ||||||||
Sbjct 2362 AAAGATCTGCAT 2373
>seq59939
Length=800
Score = 95.1 bits (104), Expect = 1e-14
Identities = 114/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 35582 TCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTG 35641
|| ||||||||||| || ||||| |||| || |||||| || | |||| || ||||||
Sbjct 11 TCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTG 70
Query 35642 TCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATC 35701
||| |||||| ||| | | || | | ||||| || | || ||||| | |||||
Sbjct 71 TCCTGGATCTTGGCCTTGACATTTTCGATTGTGTCACTAGGCTCAACCTCGAGGGTGATG 130
Query 35702 GTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| || ||||| | || |||||||| ||||||||
Sbjct 131 GTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCAT 165
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447832438270160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |