Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_026599.1 Length=45808 Score E Sequences producing significant alignments: (Bits) Value seq43491 93.3 1e-14 >seq43491 Length=5803 Score = 93.3 bits (102), Expect = 1e-14 Identities = 289/442 (65%), Gaps = 4/442 (1%) Strand=Plus/Plus Query 43004 TAGGGTGGTCAAACCCAAGGTCGATACCGATGATCCTGTGGA-AGTGATCGGGGATCTGG 43062 ||||||||||||| |||| ||| | ||| ||| | | | | |||||| || || | Sbjct 4957 TAGGGTGGTCAAAACCAAAGTCCAGCCCGCAGATAC-GAGCATAGTGATTAGGAATA-GC 5014 Query 43063 AAAGGCTCACAT-ACAAACTTCTCTTCCAGAATGGGGAAGACTACACCAGATCCGAGCAT 43121 ||||| | || |||| | | ||||| ||| ||||| ||| || || || | | Sbjct 5015 AAAGGGTTCCACCACAATCCTATCTTCTGGAAAAGGGAAAACTTGGCCCGAACCAAATAC 5074 Query 43122 AGGAACACCCTCAGCCCTCATCCTGCGTTCTGCTGGAGAGTATACCGAGAGTAGCTGCTC 43181 ||| | |||| || | |||| | ||| ||||||||| || | |||| || || Sbjct 5075 AGGTATACCCCTCGCACGCATCTCTCTTTCATGTGGAGAGTAAACGGCAAGTAATTGTTC 5134 Query 43182 TTTCACTTCTGGACTGAGGTGTGGGGCGTCTTCCCAGCTTGCATGGATTAGGAACTGTCC 43241 ||| ||| | ||||| || || ||||| | || || ||||| || || Sbjct 5135 TTTAGTATCTTCGTCAATATGTGGTGCATCATCCCATGTCGCCTGTGTTAGGCTTTGCCC 5194 Query 43242 AGGTTTAAGATCCTGGAGGAAGTCCTTGACGATCTCCGTCAGACCATGCTCTGGGGTAAA 43301 || | || | | ||| || || |||| |||| ||||| |||||| || || Sbjct 5195 TGGACGTAACTCGTACATGAAAGCCCGTACTGTCTCTGTCATACCATTCTCTGGCGTGAA 5254 Query 43302 CGTCAGATATACAATACCCCCAGTAGTAGCCGTTCGGGTTACACACTGGGTATAAATATC 43361 ||||| | |||||||| | || ||||| || || || | ||| || ||| | |||| Sbjct 5255 CGTCATTGAAACAATACCTCTTGTTGTAGCGGTACGAGTAATACATTGCGTAAAGATATT 5314 Query 43362 TTTGGGGCATTCCTCATCGAGCCAGATAACATCGATGGCGGTACCCATGAATTTGTCCTG 43421 | || ||| ||||| | ||| || ||| | || | ||||||||||||| || Sbjct 5315 GTGTGGTGGTTCTTCATCCAACCATATCCAATCTAACGCCGAGCCCATGAATTTGTGCTC 5374 Query 43422 GGACATTTCGTAGGACTTGAAG 43443 ||| ||||| ||||||||| Sbjct 5375 TCCCATCTCGTAAGACTTGAAG 5396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145550015391480