Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_026599.1
Length=45808
Score E
Sequences producing significant alignments: (Bits) Value
seq43491 93.3 1e-14
>seq43491
Length=5803
Score = 93.3 bits (102), Expect = 1e-14
Identities = 289/442 (65%), Gaps = 4/442 (1%)
Strand=Plus/Plus
Query 43004 TAGGGTGGTCAAACCCAAGGTCGATACCGATGATCCTGTGGA-AGTGATCGGGGATCTGG 43062
||||||||||||| |||| ||| | ||| ||| | | | | |||||| || || |
Sbjct 4957 TAGGGTGGTCAAAACCAAAGTCCAGCCCGCAGATAC-GAGCATAGTGATTAGGAATA-GC 5014
Query 43063 AAAGGCTCACAT-ACAAACTTCTCTTCCAGAATGGGGAAGACTACACCAGATCCGAGCAT 43121
||||| | || |||| | | ||||| ||| ||||| ||| || || || | |
Sbjct 5015 AAAGGGTTCCACCACAATCCTATCTTCTGGAAAAGGGAAAACTTGGCCCGAACCAAATAC 5074
Query 43122 AGGAACACCCTCAGCCCTCATCCTGCGTTCTGCTGGAGAGTATACCGAGAGTAGCTGCTC 43181
||| | |||| || | |||| | ||| ||||||||| || | |||| || ||
Sbjct 5075 AGGTATACCCCTCGCACGCATCTCTCTTTCATGTGGAGAGTAAACGGCAAGTAATTGTTC 5134
Query 43182 TTTCACTTCTGGACTGAGGTGTGGGGCGTCTTCCCAGCTTGCATGGATTAGGAACTGTCC 43241
||| ||| | ||||| || || ||||| | || || ||||| || ||
Sbjct 5135 TTTAGTATCTTCGTCAATATGTGGTGCATCATCCCATGTCGCCTGTGTTAGGCTTTGCCC 5194
Query 43242 AGGTTTAAGATCCTGGAGGAAGTCCTTGACGATCTCCGTCAGACCATGCTCTGGGGTAAA 43301
|| | || | | ||| || || |||| |||| ||||| |||||| || ||
Sbjct 5195 TGGACGTAACTCGTACATGAAAGCCCGTACTGTCTCTGTCATACCATTCTCTGGCGTGAA 5254
Query 43302 CGTCAGATATACAATACCCCCAGTAGTAGCCGTTCGGGTTACACACTGGGTATAAATATC 43361
||||| | |||||||| | || ||||| || || || | ||| || ||| | ||||
Sbjct 5255 CGTCATTGAAACAATACCTCTTGTTGTAGCGGTACGAGTAATACATTGCGTAAAGATATT 5314
Query 43362 TTTGGGGCATTCCTCATCGAGCCAGATAACATCGATGGCGGTACCCATGAATTTGTCCTG 43421
| || ||| ||||| | ||| || ||| | || | ||||||||||||| ||
Sbjct 5315 GTGTGGTGGTTCTTCATCCAACCATATCCAATCTAACGCCGAGCCCATGAATTTGTGCTC 5374
Query 43422 GGACATTTCGTAGGACTTGAAG 43443
||| ||||| |||||||||
Sbjct 5375 TCCCATCTCGTAAGACTTGAAG 5396
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 145550015391480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |