Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq44246 194 2e-44
seq152719 107 2e-18
seq103378 89.7 5e-13
seq6427 87.8 2e-12
>seq44246
Length=4029
Score = 194 bits (214), Expect = 2e-44
Identities = 910/1428 (64%), Gaps = 29/1428 (2%)
Strand=Plus/Plus
Query 7524 CTACTTGTTGAAAATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGT 7583
|||| || |||| ||||||||| || ||||| || || |||||||| || | ||
Sbjct 312 CTACCTGCTGAAGATCAACGGCAAAGTGGCGGAGCGGCCGCAGCACATGCTCATGAGGGT 371
Query 7584 GGCGGTGGGCATTCAC--GGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATG 7641
| |||| || || ||| | || || || ||||||||| | || || ||| | || |
Sbjct 372 GTCGGTCGGAATCCACAAGACG--GATATCGACGCCGCCATCGAGACCTACAACCTGCTC 429
Query 7642 TCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCGCCT 7701
|| ||| ||| || ||||| || ||||| | || ||| || || ||| ||||
Sbjct 430 TCGGAGAAGTGGTTCACCCACGCCTCCCCCACGCTCTTCAACGCAGGAACCAACCGGCCT 489
Query 7702 CAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAAC 7761
|| | ||| || || |||| |||||| || ||||||||||| ||||| ||| ||
Sbjct 490 CAGCTCTCCAGCTGCTTCCTGCTCACCATGAAGGACGACAGCATCGAGGGCATCTACGAC 549
Query 7762 ACGCTGCGCGATTGCGCCAATATTTCCAAATACGGC-GGCGGAATAGGTCTGAACGTAAA 7820
|||||| | || || || ||||| | |||| || ||||| ||| || ||| |
Sbjct 550 ACGCTGAAGCAGTGTGCACTCATCTCCAAGT-CGGCAGGAGGAATCGGTGTGGCCGTCAG 608
Query 7821 CGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGA 7880
| | | || ||| ||| ||| ||||| ||||||||| || ||| ||| | |
Sbjct 609 CTGCATCCGATCCACCGGGAGCTACATCGCCGGCACCAACGGCAACTCCAACGGGCTGGT 668
Query 7881 GCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGG---AAAGCG 7937
|||||| || | || | ||| ||| | | || |||| |||||||| || |||||
Sbjct 669 CCCCATGCTGAGGGTCTACAACAACACAGCACGCTATGTCGACCAGGGCGGCAACAAGCG 728
Query 7938 CAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGACATTTACGCAGTGCTAAA 7997
|||||| ||||| || |||||||||||||| ||| | | || | || |
Sbjct 729 ACCCGGCGCCTTCGCCATGTACCTGGAGCCGTGGCACTTTGACGTGTTCGACTTCCTGGA 788
Query 7998 TCTGCGTCGCAACATGGGTTGCGAAGA-CAGCAAAGCGCGCGATCTATTCTTCGGATTGT 8056
||| |||| ||| || || ||| | ||| | ||||| |||| ||| ||||
Sbjct 789 GCTGAAGAAGAACACGGGGAAGGAGGAGCAG-AGAGCCAGAGATCTCTTCTACGGCTTGT 847
Query 8057 GGGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACGCACAATGGTCGCTCATGTGCC 8116
|| | ||||| ||||| |||| | | || | | || | ||||| || ||||| |
Sbjct 848 GGATCCCCGACCTGTTCATGAAGAGGGTGGAGAGCAACCAGGACTGGTCTCTGATGTGTC 907
Query 8117 CCGATCG-TTGCCCTTTATTAAAAAACGTTTACGGTTCAAAATTTGAACAATTGTACAAA 8175
|| | || |||| | | | | || | ||||| | | ||||
Sbjct 908 CC-AGCGAGAGCCCCGGGCTGGACGAGTGCTGGGGGGAGGAGTTTGAGAAGCTCTACACC 966
Query 8176 CAATACGAACACGACGGCGCGTACGTGCGGCAAGTGAAAGCGCGCGACCTGCACCGCGCC 8235
||||| || | || ||| | | ||| ||||| || | | || | ||||
Sbjct 967 CAATATGAGCGGGAGGGCCGGGTCAAGCGTGTGGTGAAGGCTCAGCAGGTGTGGCACGCC 1026
Query 8236 ATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGCAAC 8295
|| ||||| | || | || | || | |||||||||||||||||||||||| ||||||
Sbjct 1027 ATCATCGAGTCCCAGACGGAGTCGGGCACGCCGTACATGCTGTACAAAGACGCCTGCAAC 1086
Query 8296 GCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAAATT 8355
|| ||||| || ||| |||| ||||| |||||||| || ||| | |||||
Sbjct 1087 AGGAAGAGCAACCAGCAGAACCTGGGAACCATCAAGTGCAGCAACCTCTGCACGGAAATC 1146
Query 8356 GTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTCGGTGTGTTTAAAC 8415
|| | ||| | ||| || || || || || ||||| || || | | | |||
Sbjct 1147 GTTGAATACTCCAGTGGCGATGAGGTCGCTGTGTGTAATCTGGCCTCCATCGCTCTCAAC 1206
Query 8416 GCGTTCGTTGATCGACGCTCAAAC--ACTTACGACTTTGAACAATTGAAAAACGCCGTG- 8472
|| ||| || | | | | |||| ||||| | || || | | |||
Sbjct 1207 ATGTACGT-----CACCCCCGAGCGGACTTTTGACTTCAAGAAACTG---GAGTCTGTGA 1258
Query 8473 --CAAGTGACGGTACGCAATTTAGATCGCATCATTGATGTCAATTTTTATCCCTTGGAAG 8530
|||||| || || | | ||||| || | || || || || || |
Sbjct 1259 CCAAAGTGATCGTGAAGAACCTGAACAAGATCATAGAGATTAACTTCTACCCGGTGCCCG 1318
Query 8531 AAGCGCGCGTA-TCGAACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTCTGGCC 8589
| || || | || |||| ||||||||| || | || | ||||| || || ||||||
Sbjct 1319 AGGC-CGATCAGTCCAACAAGCGCCACAGGCCGATCGGTATCGGCGTCCAGGGCCTGGCC 1377
Query 8590 GACGCGTTTGCCATGTTGCGCCTCCCCTACGAAAGCCAAGAAGCGCGCATGCTCAACATA 8649
||||| || | || |||| ||||| ||||||| || || | |||| |||||
Sbjct 1378 GACGCCTTCATCCTGATGCGTTACCCCTTTGAAAGCCCCGAGGCCCAGCTGCTGAACATC 1437
Query 8650 AAAATAGCGGAAACGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGCCCGAGAA 8709
| || || || | || |||| ||| | || |||||||| |||| ||| ||
Sbjct 1438 CAGATCTTTGAGACCATCTACTACGCCGCCCTGGAGGCCAGCTGCGAACTGGCCGCCGAG 1497
Query 8710 TTGGGCACGTACGAATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAATACGAC 8769
||||| | ||||| |||||| ||| ||| | |||| || || | || ||||||
Sbjct 1498 CTGGGCCCCTACGACACGTACG-AGGCTCCCCCGTCAGCAAGGGCATCCTCCAGTACGAC 1556
Query 8770 ATGTGGAATGTCACGCCCACCTCTTTGTGGAATTGGAGCGATTTGAAACGCAAAATTGCT 8829
|||||| | ||||||||| ||||| | |||| |||| || || ||
Sbjct 1557 ATGTGGGAGAAGACGCCCACCGACCTGTGGGACTGGAAGCTGCTGAAGGAGAAGATCGCC 1616
Query 8830 CAATTCGGTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACTGCTCAA 8889
| ||| || | || ||| || |||| |||||||| ||| | || || ||
Sbjct 1617 AAGCACGGCGTGAGGAACAGCCTGCTGCTGGCCCCGATGCCCACGGCCTCCACCGCCCAG 1676
Query 8890 ATAATGGGAAACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTAC 8937
|| |||| |||||||| ||| | ||| | | ||||| |||| | |||
Sbjct 1677 ATCCTGGGCAACAACGAGTCCATCGAGGCCTACACCAGCAACATCTAC 1724
>seq152719
Length=2073
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|||||||| || || | ||| || || || ||||| || || || ||||||||||||
Sbjct 44 CCTCCTCTCAGGCGGAGCACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAG 103
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | ||| || ||||| ||||| ||||| |||| | ||||||||| || ||
Sbjct 104 AGAGTGCGGCCGTCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCAGGAGGG 163
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || || || |||||| || | |||||| | ||| ||
Sbjct 164 ATGCCCTCCTTATCCTGGATCTTAGCTTTGACATTCTCAATGGTGTCGCTGGGTTCAACC 223
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| ||||| |||| ||||| || | || || || || || |||||
Sbjct 224 TCCAGAGTGATGGACTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 270
>seq103378
Length=1867
Score = 89.7 bits (98), Expect = 5e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 8232 CGCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTG 8291
|||||| ||||| | || | ||||| |||| |||||||||||| ||||| ||||| ||
Sbjct 1651 CGCCATCATCGAGTCACAGACTGAAACGGGTACGCCGTACATGCTCTACAAGGACGCCTG 1710
Query 8292 CAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGA 8351
||||| || ||||| || || |||| ||||| | ||||||||||||| | ||
Sbjct 1711 CAACGGGAAGAGCAACCAGCAGAATCTGGGAACCATCAAATCCAGCAATCTGTGCACAGA 1770
Query 8352 AATTGTACAGTACA 8365
|| || ||||||
Sbjct 1771 GATAGTGGAGTACA 1784
>seq6427
Length=3314
Score = 87.8 bits (96), Expect = 2e-12
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| ||||| || || | || || || || ||||| ||||| || ||||||||||||
Sbjct 3108 CCGCCTCTCAGACGGAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 3167
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || || ||||| ||||| ||||| |||| | ||||||||| || ||
Sbjct 3168 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGA 3227
Query 134607 ATGCCTTCTTTTTCTTGAATTTT 134629
|||||||| || || || || ||
Sbjct 3228 ATGCCTTCCTTGTCCTGGATCTT 3250
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 502078551625040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |