Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_026923.1 Length=179110 Score E Sequences producing significant alignments: (Bits) Value seq509954 120 3e-22 >seq509954 Length=433 Score = 120 bits (132), Expect = 3e-22 Identities = 236/349 (68%), Gaps = 0/349 (0%) Strand=Plus/Plus Query 104831 TTGCTCAGGACCTCAAGGCAATTCATGGTTTGGATGCCGAGACCGAGCTGAGCAACATCC 104890 |||||||||| | || || | ||||| ||||| || || || || || || | Sbjct 1 TTGCTCAGGATATGAAAGCTGTACATGGCTTGGACGCAGAAGAAGAACTTGCAAATATTC 60 Query 104891 TCAGCACCGAGATCCTCGCTGAAATCAACCGTGAAGTTGTCCGTACCGTCTATGTAAACG 104950 | || || || || || ||||| |||||||| | | |||||||| |||| || | Sbjct 61 TTTCAACTGAAATTCTTGCAGAAATTAACCGTGAGCTAATTCGTACCGTATATGCAACTG 120 Query 104951 CTGTTGCTGGTGCTCAGAACAACACCGCTTCTGCTGGTATCTTTGACCTTGACGTTGACT 105010 | ||||||| || | | || ||||||||||| || | ||||| || Sbjct 121 CAAAACCTGGTGCACAAACTGGTTCAGCAAACGCTGGTATCTTCGATTTAGACGTAGATG 180 Query 105011 CCAACGGCAGATGGTCTGTTGAGAAGTTCAAAGGACTTCTGTTCCAGATTGAGCGTGATG 105070 | || || | ||||| || || || |||||||||||| ||||||| ||||| ||||||| Sbjct 181 CAAATGGTCGCTGGTCAGTAGAAAAATTCAAAGGACTTATGTTCCAAATTGAACGTGATG 240 Query 105071 CTAACGCTATCGGTCAGCAAACTCGTCGCGGGAAAGGCAACATCCTGATCTGCTCTGCAG 105130 ||||| |||| | | |||| | || || ||||| ||| | | ||||| || | | Sbjct 241 CTAACCAAATCGCTAAAGAAACCAGACGTGGTAAAGGTAACTTTATTATCTGTTCATCTG 300 Query 105131 ACGTTGCTTCTGCCCTTGCGATGGCTGGTGTTCTTGACTACACCCCTGC 105179 |||| |||||||| | || ||||| | ||||| | | | ||||| Sbjct 301 ACGTAGCTTCTGCATTGGCTGCTGCTGGAATCCTTGATTTCGCACCTGC 349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569259934274400