Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_026924.1
Length=174885
Score E
Sequences producing significant alignments: (Bits) Value
seq509954 178 1e-39
seq24926 82.4 8e-11
>seq509954
Length=433
Score = 178 bits (196), Expect = 1e-39
Identities = 248/348 (71%), Gaps = 0/348 (0%)
Strand=Plus/Plus
Query 110914 GCTCAAGACCTTAAGGCGATTCATGGCTTGGATGCTGAGACCGAACTGGCTAACATCCTC 110973
||||| || | || || | ||||||||||| || || ||||| || || || ||
Sbjct 3 GCTCAGGATATGAAAGCTGTACATGGCTTGGACGCAGAAGAAGAACTTGCAAATATTCTT 62
Query 110974 AGCACTGAAATCCTTGCTGAAATCAACCGTGAAGTTGTTCGTACCATCTACACAAACGCT 111033
|||||||| ||||| ||||| |||||||| | |||||||| | || ||| ||
Sbjct 63 TCAACTGAAATTCTTGCAGAAATTAACCGTGAGCTAATTCGTACCGTATATGCAACTGCA 122
Query 111034 GTTCCTGGTGCTCAGAACAATACCGCTAACGCTGGTATCTTTGACCTTGACGTTGACTCC 111093
|||||||| || | | | || |||||||||||||| || | ||||| || |
Sbjct 123 AAACCTGGTGCACAAACTGGTTCAGCAAACGCTGGTATCTTCGATTTAGACGTAGATGCA 182
Query 111094 AACGGTCGTTGGTCTGTTGAGAAGTTCAAAGGACTTCTGTTCCAGATTGAGCGCGATTCT 111153
|| ||||| ||||| || || || |||||||||||| ||||||| ||||| || ||| ||
Sbjct 183 AATGGTCGCTGGTCAGTAGAAAAATTCAAAGGACTTATGTTCCAAATTGAACGTGATGCT 242
Query 111154 AACGCCATCGGTCAGCAAACTCGTCGTGGCAAGGGCAACATCCTGATTTGTTCTGCCGAC 111213
||| |||| | | |||| | ||||| || || ||| | | || ||||| | |||
Sbjct 243 AACCAAATCGCTAAAGAAACCAGACGTGGTAAAGGTAACTTTATTATCTGTTCATCTGAC 302
Query 111214 GTTGCTTCTGCACTGGGTATGGCTGGTGTACTTGATTACACTCCTGCT 111261
|| ||||||||| ||| | ||||| | ||||||| | | ||||||
Sbjct 303 GTAGCTTCTGCATTGGCTGCTGCTGGAATCCTTGATTTCGCACCTGCT 350
>seq24926
Length=5984
Score = 82.4 bits (90), Expect = 8e-11
Identities = 56/63 (89%), Gaps = 0/63 (0%)
Strand=Plus/Plus
Query 157437 CAGTAGCTCAGATGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGCAGGTTCGAGTCCT 157496
||||||||||| ||||||||||| | ||||||||||| | |||||||||||||| ||||
Sbjct 5765 CAGTAGCTCAGTTGGATAGAGCACCCGCCTTCTAAGCGGGTGGTCGCAGGTTCGAATCCT 5824
Query 157497 GCC 157499
|||
Sbjct 5825 GCC 5827
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 555828744112400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |