Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_026927.1
Length=228143
Score E
Sequences producing significant alignments: (Bits) Value
seq509954 131 2e-25
seq292165 86.0 9e-12
>seq509954
Length=433
Score = 131 bits (144), Expect = 2e-25
Identities = 293/434 (68%), Gaps = 7/434 (2%)
Strand=Plus/Plus
Query 106021 GCTCAGGATCTCAAAGCGATCCACGGTCTAAACGCCGAAGCTGAACTATCTAACATCCTC 106080
||||||||| | ||||| | || || | |||| |||| ||||| | || || ||
Sbjct 3 GCTCAGGATATGAAAGCTGTACATGGCTTGGACGCAGAAGAAGAACTTGCAAATATTCTT 62
Query 106081 GCCTCTGAAATTCTTTCAGAGATCAACAGAGAAGTTGTTAGAAC--TATCTACAAGTCAG 106138
| ||||||||||| |||| || ||| | || | || | || ||| | ||| | |
Sbjct 63 TCAACTGAAATTCTTGCAGAAATTAACCGTGAGCTAATTCGTACCGTATATGCAACT--G 120
Query 106139 CTGTATTCGGTGCTCAGAACAACGT-AGCCACTCCTGGTGTATTTGACCTAGACGTTGAT 106197
| | ||||| || ||| | ||| | ||||| | || || ||||||| |||
Sbjct 121 CAAAACCTGGTGCACA-AACTGGTTCAGCAAACGCTGGTATCTTCGATTTAGACGTAGAT 179
Query 106198 TCCAACGGTAGATGGTCAGTTGAGAAGTTCAAAGGACTTATCTTCCAGATCGAAAGAGAC 106257
| || ||| | |||||||| || || |||||||||||||| ||||| || ||| | ||
Sbjct 180 GCAAATGGTCGCTGGTCAGTAGAAAAATTCAAAGGACTTATGTTCCAAATTGAACGTGAT 239
Query 106258 GCTAACGCGATCGCGCAACAAACTCGTAGAGGAAAGGGTAACTTCATCCTTTGTTCCGCG 106317
|||||| ||||| || |||| | | || || |||||||| || | ||||| |
Sbjct 240 GCTAACCAAATCGCTAAAGAAACCAGACGTGGTAAAGGTAACTTTATTATCTGTTCATCT 299
Query 106318 GATGTTGCTTCAGCTCTAACCATGGCTGGTGTACTTGACTACACCCCAGCACTCAACGCT 106377
|| || ||||| || | | ||||| | ||||| | | | || || || ||
Sbjct 300 GACGTAGCTTCTGCATTGGCTGCTGCTGGAATCCTTGATTTCGCACCTGCTATCTCTGCA 359
Query 106378 AACCT-TAACGTTGATGACACCGGTAACACCTTCGCTGGTGTTCTACAAGGTAAGTATAG 106436
|| || || || ||||| |||||||| || || |||||||||||| | ||| | |
Sbjct 360 AATCTACAAAGTAGATGATACCGGTAATACATTTGCTGGTGTTCTAAACGGTCGTTTCAA 419
Query 106437 AGTCTACATTGACC 106450
||| | ||||||||
Sbjct 420 AGTATTCATTGACC 433
>seq292165
Length=556
Score = 86.0 bits (94), Expect = 9e-12
Identities = 91/120 (76%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 151965 GATCAGGAGAAAGCCTGGGCGGAATACCTCTTTAAAGATGGTTCTATGATTGGTTTGAAC 152024
|| || ||||||| |||||| ||||||| ||||||||||| || |||||||| || ||
Sbjct 512 GAGCAAGAGAAAGAATGGGCGCAATACCTGTTTAAAGATGGCTCAATGATTGGCTTAAAT 453
Query 152025 GAGAAACTACTAGGAAACTATGTTGAGTGGATTGCTAACCGTCGTATGAAGGCTGTTGGT 152084
|| || | || | | || ||||| | |||||||||| |||||| | ||| |||||
Sbjct 452 GAACAAATTTTATGTCAATACGTTGAATACATTGCTAACCAACGTATGCAAGCTATTGGT 393
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 725134856691760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |