Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq120923 111 2e-19 >seq120923 Length=5298 Score = 111 bits (122), Expect = 2e-19 Identities = 166/236 (70%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 213995 CAGATTATTGACGGGGAAGTCTACCCTCCTACCGTCAAGGAGGCCCGAGTGCATATGGTT 214054 ||||| || |||| || || ||||| || || || ||||| | | | ||||| | Sbjct 1821 CAGATCATGAACGGAGAGGTGTACCCCCCGACGGTAAAGGAAGTGGGCGCTGATATGATC 1880 Query 214055 TACGAACCCAGCGTTCCCGAAAAGTTACGTTTCGCACTGGGTAACGAGATGTTTGGACTC 214114 ||| || ||| || ||| || ||||| |||| ||||| || || || Sbjct 1881 TACCCTCCTCACGTCCCTGAATCTCACCGCTTCGCCGTGGGCCACGAGGCTTTCGGCCTG 1940 Query 214115 GTGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGAGAGAGCACAACAGGGTTTGCGAC 214174 || || ||| | ||| ||||||||| ||||||||| | ||||||||| |||| |||||| Sbjct 1941 GTCCCGGGTCTGATGATGTACGCCACCATCTGGCTGCGGGAGCACAACCGGGTGTGCGAC 2000 Query 214175 GTGCTGAAACAAGAGCACCCGGAATGGAACGACGAACAGCTGTTCCAGATCACTCG 214230 |||||||| | | ||| || || ||| ||||||| |||||||||| ||| || Sbjct 2001 GTGCTGAAGGAGGTGCATCCCGACTGGGACGACGAGAGACTGTTCCAGACCACACG 2056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718589337036480