Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_027119.1 Length=157498 Score E Sequences producing significant alignments: (Bits) Value seq520838 86.0 6e-12 >seq520838 Length=421 Score = 86.0 bits (94), Expect = 6e-12 Identities = 128/178 (72%), Gaps = 8/178 (4%) Strand=Plus/Minus Query 29283 TCCTGAATTCACCAAACCATTGGGATGGGGAGCAAACT---GGTAACAAGCACGTGTTCT 29339 || |||| |||||||||||||||| || | |||||| ||||||||||| |||||| Sbjct 371 TCATGAACTCACCAAACCATTGGGGTG---ATCAAACTCTTGGTAACAAGCATTTGTTCT 315 Query 29340 TCATTCTTGAAGGCTGTGCTAATCCTGAAGGTACTCGTGGTTTCTACAACGAATATCTGA 29399 |||| | || || |||| ||| || ||| | | ||||| |||||||| || | ||| | Sbjct 314 TCATGTTAGAGGGTTGTGTTAACCCAGAACCTGCGCGTGGATTCTACAATGAGT-TCTTA 256 Query 29400 A-GCCAGAACTGGATAAACATCGTAAGGTTTTTGAAATGTTGGGTAGTAAAATGAAAG 29456 | | || || | |||||||| || || ||| |||| | || |||| |||| Sbjct 255 ATGGATTCGTTGAATGAGCATCGTAAAGTGTTCGAAGTGTTAGCAAGCAAAACTAAAG 198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500555820243360