Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_027132.1
Length=190768
Score E
Sequences producing significant alignments: (Bits) Value
seq509954 107 2e-18
>seq509954
Length=433
Score = 107 bits (118), Expect = 2e-18
Identities = 188/281 (67%), Gaps = 0/281 (0%)
Strand=Plus/Plus
Query 117753 GATGCAGAGCAGGAACTCGCTAACCTATTGTCTAGCGAAATCCTTGCTGAGATCAACCGT 117812
|| ||||| | ||||| || || | | || | ||||| ||||| || || ||||||
Sbjct 33 GACGCAGAAGAAGAACTTGCAAATATTCTTTCAACTGAAATTCTTGCAGAAATTAACCGT 92
Query 117813 GAGGTTGTTCGTACCGTTTACACCGTTGCTAAGCCTGGTGCTCAGANNNNNNNNNNNNNN 117872
||| | |||||||||| || | ||| || |||||||| || |
Sbjct 93 GAGCTAATTCGTACCGTATATGCAACTGCAAAACCTGGTGCACAAACTGGTTCAGCAAAC 152
Query 117873 NNNNNNNTATTTGACCTCGACGTTGACAGCAACGGTCGTTGGTCGGTTGAGAAGTTCAAA 117932
| || || | ||||| || || ||||| ||||| || || || ||||||
Sbjct 153 GCTGGTATCTTCGATTTAGACGTAGATGCAAATGGTCGCTGGTCAGTAGAAAAATTCAAA 212
Query 117933 GGACTTATGTTCCAAATCGAGCGCGATGCTAACGCTATCGCACAAGAGACTCGTAGAGGA 117992
||||||||||||||||| || || ||||||||| ||||| |||| || | | ||
Sbjct 213 GGACTTATGTTCCAAATTGAACGTGATGCTAACCAAATCGCTAAAGAAACCAGACGTGGT 272
Query 117993 AAGGGCAACTTCATCGTCACTTCTGCTGACGTTGCTTCTGC 118033
|| || ||||| || || ||| ||||||| ||||||||
Sbjct 273 AAAGGTAACTTTATTATCTGTTCATCTGACGTAGCTTCTGC 313
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 606320482181760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |