Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_027204.1 Length=194701 Score E Sequences producing significant alignments: (Bits) Value seq509954 123 3e-23 >seq509954 Length=433 Score = 123 bits (136), Expect = 3e-23 Identities = 209/302 (69%), Gaps = 3/302 (1%) Strand=Plus/Minus Query 27254 TGCCGAAGCAACGTCCGAAGAGCAGATAAGGATGTTACCCTTGCCGCGACGGGTTTCGCG 27313 ||| ||||| ||||| || || ||||||| | |||||| || || || | |||||| Sbjct 314 TGCAGAAGCTACGTCAGATGAACAGATAATAAAGTTACCTTTACCACGTCTGGTTTCTTT 255 Query 27314 AGCGATGGCGTTGGCTTCACGTTCGATCTGGAACATAAGGCCCTTGAACTTTTCTACCGA 27373 |||||| ||| || |||||||| || ||||||||||| || ||||| |||||||| || Sbjct 254 AGCGATTTGGTTAGCATCACGTTCAATTTGGAACATAAGTCCTTTGAATTTTTCTACTGA 195 Query 27374 CCAGCGACCGGAAGCGTCAACATCAAGGTCGAATACGCCCGGAGTTGTCGTTTCAG---C 27430 ||||||||| || || || || | ||||| | || | ||| | ||| Sbjct 194 CCAGCGACCATTTGCATCTACGTCTAAATCGAAGATACCAGCGTTTGCTGAACCAGTTTG 135 Query 27431 AGCACCAACCTTCGAAGTCGCGTAGATCGTGCGAACGAGTTCACGGTTGATGTCCGTAAG 27490 |||||| || | ||| || || | || |||| || |||||||| || || | ||| Sbjct 134 TGCACCAGGTTTTGCAGTTGCATATACGGTACGAATTAGCTCACGGTTAATTTCTGCAAG 75 Query 27491 AAGTTCGGCAGCGAGCATGTTCGCGAGTTCGGTTTCAGCGTCGAGACCGTGAATAGCCTT 27550 || ||| | | || || || || ||||| ||| ||||| | || || | ||| || Sbjct 74 AATTTCAGTTGAAAGAATATTTGCAAGTTCTTCTTCTGCGTCCAAGCCATGTACAGCTTT 15 Query 27551 CA 27552 || Sbjct 14 CA 13 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618823410207120