Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_027292.1 Length=39167 Score E Sequences producing significant alignments: (Bits) Value seq512931 578 1e-160 seq524349 435 8e-118 seq518992 414 2e-111 seq489868 342 1e-89 seq501937 316 5e-82 seq521066 309 8e-80 seq500082 228 2e-55 seq498418 161 2e-35 >seq512931 Length=538 Score = 578 bits (640), Expect = 1e-160 Identities = 451/538 (84%), Gaps = 0/538 (0%) Strand=Plus/Plus Query 36964 CCTGCACGGCCTGACCACTCGCCATCGGTGAAGTCCGTGGGTGTGACTGGTGGTATGACG 37023 ||||| || ||||||||| || |||||||||||||||||||| ||||| |||||||| Sbjct 1 CCTGCTCGTCCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGGCGGTATGACT 60 Query 37024 GGTAGCCGTGCTGACATTCTCATCGCGGACGACGTGGAAGTACCGGGCAACTCTGGGACG 37083 ||||||||||||||||| ||||| ||||| ||||| || || || ||||||||||| || Sbjct 61 GGTAGCCGTGCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACA 120 Query 37084 CAATCCGCACGGGACCACCTCGGTGAACTCGTAAAGGAATTCGATGCGATCCTGAAGCCG 37143 || |||||| |||| ||||| || || || ||||||||||||||||||||||||||||| Sbjct 121 CAGTCCGCAAGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCCT 180 Query 37144 GACGGAACGATCATCTACCTCGGGACCCCACAGACCGAAATGACCCTTTACCGGGAACTT 37203 ||||| |||||||||||| | || ||||||||||||||||||||||| ||| |||||||| Sbjct 181 GACGGTACGATCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTT 240 Query 37204 GAGGACCGTGGCTACTCGACGACTATCTGGCCTGCACGATACCCTCGTGATGCGGCTGAC 37263 |||||||| |||||||||||||| ||||||||||||||||||||||| |||| ||||||| Sbjct 241 GAGGACCGCGGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGGGATGTGGCTGAC 300 Query 37264 CTTGAGTCCTACTACCATGCCAAGGGCAATCGTTCGCGACTTGACCCAACCATGCTGGCA 37323 ||||||||||||| || ||||||||||| || || || || |||| |||||||| Sbjct 301 CTTGAGTCCTACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACCTTACCATGCTCAAG 360 Query 37324 GAACTTGAGGCCGACTCACGGCTCTTCTGGAAGCCCACAGACCCTGTGCGGTTCGATGAT 37383 || || || | |||| ||| ||||||||||| ||||||||| | || ||||||||| Sbjct 361 GAGCTGGAAGACGACGAGAAGCTGTTCTGGAAGCCTACAGACCCTATTCGATTCGATGAT 420 Query 37384 GAGGACCTTCGGGAACGTGAGCTGTCATACGGTAAGGGTGGCTTTGCATTGCAGTTCATG 37443 || ||||| || || || || || ||||| || ||||||||||| || | ||||||||| Sbjct 421 GAAGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGCTCTACAGTTCATG 480 Query 37444 CTTAACCCAAACCTCAGTGATATCGAAAAGTACCCTCTCAAGCTGCGTGACTGGATCG 37501 || ||||| ||||| || || ||||| |||||||| | ||||||||||| ||||||| Sbjct 481 CTCAACCCGAACCTTAGCGACATCGAGAAGTACCCGTTGAAGCTGCGTGATTGGATCG 538 >seq524349 Length=315 Score = 435 bits (482), Expect = 8e-118 Identities = 261/274 (95%), Gaps = 0/274 (0%) Strand=Plus/Plus Query 12925 GACCAAGTATGGAACGCCCAGAAGTACGTCCCTGATGGCGTGGTCTCGGCGAAGTCCCTT 12984 |||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||| Sbjct 1 GACCAAGTGTGGAACGCCCAGAAGTACGTCCCTGATGGTGTGGTCTCGGCGAAGTACCTT 60 Query 12985 AAGGCCCGCATCAAGGAAAAGAAGGTTATCGCTTCGATGCCTTTGGTTGGACCTCACGAG 13044 |||| ||||||||| ||||||||||||||| |||||||||||||||| |||||||||||| Sbjct 61 AAGGGCCGCATCAAAGAAAAGAAGGTTATCACTTCGATGCCTTTGGTGGGACCTCACGAG 120 Query 13045 CTGTCCCGCATGACCAAGAACATCCGCGAAGGCGAAGTCATTCTGGTCACCTCGGGTTCC 13104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 121 CTGTCCCGCATGACCAAGAACATCCGCGAAGGCGAAGTCATTCTGGTCACCTCGGGCTCC 180 Query 13105 GGTTCGGGTAAGTCCACGTTCGTCCGTCAGAACACCTACAACCTCTTCCATGAGGCGAAG 13164 || ||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||| | Sbjct 181 GGCTCGGGCAAGTCCACGTTCGTCCGACAGAACACCTACAACGTCTTCCATGAGGCGACG 240 Query 13165 ATCCCGGTGGGCGTTGCGATGCTTGAGGAATCCG 13198 |||||||||||||||||||||||||||||||||| Sbjct 241 ATCCCGGTGGGCGTTGCGATGCTTGAGGAATCCG 274 >seq518992 Length=261 Score = 414 bits (458), Expect = 2e-111 Identities = 246/257 (96%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 10011 CAAAGCTGCCCCATATGCGGCGATCCAAAAGCCCGACTTCGGCACCACCGAGTTCCCGCA 10070 ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct 260 CAAGGCTGCCCCATATGCGGCGATCCAAAAGCCCGACTTCGGCACCACTGAGTTCCCACA 201 Query 10071 ACCACGCGGCGAGTACAAGGTGAACCTGATCGTGCCCATCAAGGATGCACAGGCTGACAT 10130 ||| || ||||||||||||||||||||||||||| || | ||||||||||| |||||||| Sbjct 200 ACCTCGTGGCGAGTACAAGGTGAACCTGATCGTGTCCTTGAAGGATGCACAAGCTGACAT 141 Query 10131 CAAGCGCATCACCAAGATTTACGAGGACTCCTACGCCGAGTTCTTGGCTGAACACGAAGC 10190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 140 CAAGCGCATCACCAAGATTTACGAGGACTCCTACGCCGAGTTCTTGGCTGAACACGAAGC 81 Query 10191 GAACCCGCCAAAGGTCGCTGCTGGCAAGCGTCCAGTACCGGTCCGTCAAGGCGACCTTCC 10250 ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 80 GAACCCGCCAAAGGTCGCTGCTGGCAAGCGTCCCGTACCGGTCCGTCAAGGTGACCTTCC 21 Query 10251 GTTCTTCGAGGACGGCA 10267 ||||||||||||||||| Sbjct 20 GTTCTTCGAGGACGGCA 4 >seq489868 Length=343 Score = 342 bits (378), Expect = 1e-89 Identities = 300/370 (81%), Gaps = 29/370 (8%) Strand=Plus/Plus Query 1888 GTCGTGAACGTGATCCACAGTGACATCGGTCTGGA-CACTTCCAGCACCGTGCAAGCTCT 1946 ||||||||||| ||| ||||||||||||||||||| | |||||||||||||||||||||| Sbjct 1 GTCGTGAACGTAATCAACAGTGACATCGGTCTGGATCGCTTCCAGCACCGTGCAAGCTCT 60 Query 1947 GGTAGAGTAGCGTTAATCGGTGGCCTTCT-CTTGAGGGTCACCCGTTAAATCCACTCACT 2005 ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 61 GGTCGAGTAGCGTTAATCGGTGGCCTTCTTCTTGAGGGTCACCCGTTAAATCCACTCACT 120 Query 2006 GGTAACACACCATGGCAGAAGCATTCGTACTGGGAGCGCTCGTGTTCCTAATTGTCTGGG 2065 |||| ||||||||| | | || || | | |||| || | || Sbjct 121 GGTACCACACCATGTCCCTAA-------AC-GGCATC-----TGTTTCT-------TCGG 160 Query 2066 AAGAATCAATCCGTCCACGCCTTAAGGCCCGCAAAGGTAACGCCAAATGATCAGCCTGAA 2125 | || ||| ||| | || | | || | | |||||| ||||||| Sbjct 161 CACCTTCG------CCAT-CCTCACTGCAATCTACGGGTTCCCACTATGATCCGCCTGAA 213 Query 2126 TCACACCAGCTTCACCAGCTTGAGCGCCAACATCGTCAACGCAATGGCCTTTGTCCTGCA 2185 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 214 TCACACCAGCTTCACCAGCTTGAGCGCCAATATCGTCAACGCAATGGCCTTTGTCCTGCA 273 Query 2186 CACTGGCGACAGCAAGCGCTTGATCAACCGTCGCGGCAACCCATGGTTGTTGGTGACCCT 2245 |||||||||||||| ||||||||||||||||||||| || |||||| ||||||||||||| Sbjct 274 CACTGGCGACAGCACGCGCTTGATCAACCGTCGCGGTAAACCATGGCTGTTGGTGACCCT 333 Query 2246 CGTTCGTGAC 2255 |||||||||| Sbjct 334 CGTTCGTGAC 343 >seq501937 Length=338 Score = 316 bits (350), Expect = 5e-82 Identities = 279/344 (81%), Gaps = 8/344 (2%) Strand=Plus/Plus Query 33761 CAAGTACCGGGTGCCTCGTGGGCACTGGCTGCTGGACAGGCTGGGCACAGTGCGATTGGC 33820 ||||||||||||| ||| ||||| || |||||||| ||||| |||||| | | |||| Sbjct 3 CAAGTACCGGGTGTCTCATGGGCTCTCGCTGCTGGTCAGGCGGGGCACTCTCTGGCTGGC 62 Query 33821 TTGGCGGGATCTAACGGTCGCCGTCAGGATCAAGAGTACATGACCAGCCTCTACAACGGC 33880 ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct 63 TTGGCGGGATCTAACGGTCGCCGTCAGGACCAAGAGTACATGACCAGTCTCTACAACGGG 122 Query 33881 CTGCGCGGGATCATCCCGAACGACCCAGCGTCTCAGTTCCTCCTTATGAAAATCATGGAA 33940 || || |||||||| || |||||||| || |||||||||||||| ||||| ||||||||| Sbjct 123 CTCCGTGGGATCAT-CCTAACGACCCGGCCTCTCAGTTCCTCCTGATGAAGATCATGGAA 181 Query 33941 GAGCAGGGCATTGAGGCACGGTAAAACCCCTCACCTAAACAGGGAGTGCTTACACAGGCT 34000 |||||||| || || ||||||||||||| |||||||| || |||| |||| |||| ||| Sbjct 182 GAGCAGGGTATCGAAGCACGGTAAAACCACTCACCTATACCGGGA--GCTTGCACA-GCT 238 Query 34001 CCCATTCATTTTCTTAAGGAGGCCCACATGGCTGACGCTCCAAAGACAACGATCACGTAT 34060 || | ||| | ||||||| || ||||| |||||||||||| | ||||| Sbjct 239 CC----CCTTTCCATAAGGAGACCTCTATGGCACTCGCTCCAAAGACTGTCTTGGCGTAT 294 Query 34061 CCTCTTGACGGATCGAACAAAGACTTCCCGATCCCTTTCGAGTA 34104 || |||||||| |||| ||||||| |||||| || || || Sbjct 295 CCGCTTGACGGTGCGAATCGAGACTTCGTGATCCCCTTTGAATA 338 >seq521066 Length=280 Score = 309 bits (342), Expect = 8e-80 Identities = 236/279 (85%), Gaps = 0/279 (0%) Strand=Plus/Plus Query 19753 CATGGAAGCCAACAGCTACCGCACGACCCTTCACGAGCTGATCCGTCAGTTGGTGATTGC 19812 ||||||||||||||| |||||||| || | ||||||||||| |||||||||||||| || Sbjct 1 CATGGAAGCCAACAGTTACCGCACCACGTTGCACGAGCTGATTCGTCAGTTGGTGATCGC 60 Query 19813 CGGTGCTGGTTGCCTGTACCTTCCGCCACCTGAGAGTTCGTCTCAAGGGTCGCCCATGAA 19872 || |||| |||||||||||||| |||||| ||||| | |||||| || ||||| Sbjct 61 TGGGTCTGGCCTGCTGTACCTTCCGCCTCCTGAGGGTTCGACCCAAGGGAGCCCTATGAA 120 Query 19873 GCTCTACACGTTGCACAACCACGTTGTCCAGCGCGATGCCTTCGGTAACATCCTGCAAAT 19932 |||||||||| ||||||||||||| ||||| || || ||||||| ||| |||| || || Sbjct 121 GCTCTACACGCTGCACAACCACGTAGTCCAACGGGACTCCTTCGGGAACGTCCTACAGAT 180 Query 19933 CTGCACGCTCGACAGAGTGGCCTTCGCGGCCCTTCCTGAAGACGTTCGGACCAAACTTGA 19992 | |||||||||| |||||||| |||||||||||||||||||| ||| |||||||||| Sbjct 181 CGTTACGCTCGACAAGGTGGCCTTTGCGGCCCTTCCTGAAGACGTGCGGTCCAAACTTGA 240 Query 19993 TGGGGAGCATAAGCCCGATGAAGAGATCGAAGTCTACAC 20031 || ||||||||||||||||||||||||||||||| ||| Sbjct 241 CGGAGAGCATAAGCCCGATGAAGAGATCGAAGTCTTCAC 279 >seq500082 Length=313 Score = 228 bits (252), Expect = 2e-55 Identities = 231/301 (77%), Gaps = 0/301 (0%) Strand=Plus/Minus Query 5172 CGAAGATGGTATCCAATGGCTGATGATCCACGGTGCGAATACCGCTGGTGTCGATAAGGT 5231 |||||||||||| |||||||| ||||| ||||| || || || ||||| ||||||||||| Sbjct 313 CGAAGATGGTATTCAATGGCTCATGATTCACGGGGCCAACACTGCTGGGGTCGATAAGGT 254 Query 5232 TCCTTTCGATGAACGTAAACAATGGGTTCGGGACAATGAAGAGTGCATCCTCGGTTGCGC 5291 ||||||||| |||| || ||||||||||| ||||||||| | |||||| | ||||| Sbjct 253 CCCTTTCGATCAACGCAAGCAATGGGTTCGTGACAATGAATCGACTATCCTCCGATGCGC 194 Query 5292 AAGAGACCCACTTCAGAACACAGAATGGATGTCAATGGATTCTCCCTTTTGCTTCCTTGC 5351 |||||| || |||| || |||||| ||||| || ||||| || ||| | || Sbjct 193 TGAAGACCCGCTCACTCACACCGAGTGGATGGGGATGGACTCGCCCTTCTGTTTCTTGGC 134 Query 5352 GTTCTGTTTTGAATGGGCTGGAGTCAAGCGGGATGGTGCGAACCACGTATCCGCTCTGCC 5411 |||||| || || ||||| || ||| || ||||| || ||| ||||||||| || Sbjct 133 GTTCTGCTTCGAGTGGGCCGGTGTCGTTCGCGATGGAGCTGCACACCGATCCGCTCTACC 74 Query 5412 CATCGCTTTTGACGGGTCTTGCTCAGGCATTCAGCACTTTTCTGCAATGCTTCGAGACGA 5471 |||||||||||||| || || || || ||||| |||||||| ||||| || ||||| Sbjct 73 AATCGCTTTTGACGGAAGCTGTTCGGGTATCCAGCATTTTTCTGCCATGCTCCGGGACGA 14 Query 5472 A 5472 | Sbjct 13 A 13 >seq498418 Length=347 Score = 161 bits (178), Expect = 2e-35 Identities = 148/185 (80%), Gaps = 14/185 (8%) Strand=Plus/Plus Query 407 CGCTCTTTAACAACTTGGATGCAACATGGTCTGCAAGGCTCCGAAAG----GACACCTAC 462 ||||||||||||| ||||| | ||||| | |||| ||| || || | ||| Sbjct 29 CGCTCTTTAACAATTTGGA----ATTTGGTCGGTCAGGCACCGTAACAGGTGAAAGATAC 84 Query 463 AGGCATCGCTACGAAGGCAAGCACTGAGCCTTCTCATAGCACCTTTGAGGGCCTGAACGG 522 |||||||||||||||||||||||||||||||| | |||||||||||||||| |||||| Sbjct 85 CGGCATCGCTACGAAGGCAAGCACTGAGCCTTCCTACAGCACCTTTGAGGGCCCGAACGG 144 Query 523 ATGTTACGGGTAGGGTCAGCAAGGGTCTTATGGGAATCCCTTAGACAACGC----TGGAG 578 |||| ||||||| |||||||||||||||| |||||| |||||| ||||| |||| Sbjct 145 ATGTCACGGGTACGGTCAGCAAGGGTCTTGTGGGAACACCTTAG--AACGCCAATAGGAG 202 Query 579 CAACA 583 ||||| Sbjct 203 CAACA 207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124431430025196