Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_027344.1
Length=158099
Score E
Sequences producing significant alignments: (Bits) Value
seq449735 172 6e-38
seq494957 82.4 8e-11
>seq449735
Length=3187
Score = 172 bits (190), Expect = 6e-38
Identities = 282/399 (71%), Gaps = 8/399 (2%)
Strand=Plus/Minus
Query 14856 CCGTAATCTAGATGACGAATGCGGTTTTCATCTACACCTTTGTTGTTCTTTAATACCAAA 14915
|||||||||| |||||| | |||||| ||||| || || ||| || || | ||| ||
Sbjct 422 CCGTAATCTAAATGACGCACGCGGTTGTCATCAACCCCGCGGTTATTTTTAAGTACTAAC 363
Query 14916 AGGTTTTCAACCTCAAGATGCCACATTGGATAATAAAGAGTAGCTGCACCACCACGGACA 14975
|||||||| || || | |||||| | || || | | || ||||| || ||||| |||
Sbjct 362 AGGTTTTCTACTTCTAAATGCCAAAGCGGGTAGAACAAGGTTGCTGCGCCGCCACGTACA 303
Query 14976 CCGCCTTGAGAACAAGATTTTACTGCAGTCTGAAAATGTTTCCAGAAAGGAATTACGCCA 15035
|||||||| ||||| ||| || || || ||||| || || | |||||||| ||
Sbjct 302 CCGCCTTGCGAACAGCTTTTAACCGCTGTTTGAAAGTGCTTATAAAAAGGAATACAACCC 243
Query 15036 GTATGTTTTACTTCGCCATTACCAATTTTTGAGCCTTCAGCTCGAATCATACCGGCGTTG 15095
||||| | |||||||||| | ||| | || || ||||| ||| |||||
Sbjct 242 GTATGGTACGCTTCGCCATTGCGAATGTGGCTACCCAGTGCACGAATGCGACCTGCGTTA 183
Query 15096 ATGCCTATACCAGCTCGCTTGCTGATA--TACTTAATAATACTG-TTACTTGCT-GCATT 15151
||||| || || || || |||| |||| || |||| ||| || || | | || ||
Sbjct 182 ATGCCAATGCCGGCACG-TTGC-GATACGTATTTAACAAT--TGCAGACGAGGTGGCGTT 127
Query 15152 AATAGAATTCAGTGAATCGCCAGCTTCAATAACTACACAAGAACTAAACTGACGAGTAGG 15211
||| |||| || |||||| || || | |||||| || |||||||| || || ||
Sbjct 126 AATTGAATCAAGGCTGTCGCCACACTCTATTAATACACACGAGCTAAACTGGCGTGTTGG 67
Query 15212 AGTACGAGCCCCTGCCATAATCGGTGTAGGCAATGAAAT 15250
|||||| | ||||||||||| || ||||| | ||||||
Sbjct 66 CGTACGAACACCTGCCATAATTGGCGTAGGTAGTGAAAT 28
>seq494957
Length=669
Score = 82.4 bits (90), Expect = 8e-11
Identities = 65/77 (84%), Gaps = 1/77 (1%)
Strand=Plus/Plus
Query 103768 TGGTGGCCCCTGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCGCCTGCTCTAACC 103827
||||||||||| | |||| |||| | |||| | ||||||||||||| ||||||||||
Sbjct 70 TGGTGGCCCCTCCCAGACTCGAACTGGGGACCTAACGATTATGAGTCGTGTGCTCTAACC 129
Query 103828 -ACTGAGCTAAGGGGCC 103843
||||||||||||||||
Sbjct 130 AACTGAGCTAAGGGGCC 146
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 502466387175280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |