Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_027344.1 Length=158099 Score E Sequences producing significant alignments: (Bits) Value seq449735 172 6e-38 seq494957 82.4 8e-11 >seq449735 Length=3187 Score = 172 bits (190), Expect = 6e-38 Identities = 282/399 (71%), Gaps = 8/399 (2%) Strand=Plus/Minus Query 14856 CCGTAATCTAGATGACGAATGCGGTTTTCATCTACACCTTTGTTGTTCTTTAATACCAAA 14915 |||||||||| |||||| | |||||| ||||| || || ||| || || | ||| || Sbjct 422 CCGTAATCTAAATGACGCACGCGGTTGTCATCAACCCCGCGGTTATTTTTAAGTACTAAC 363 Query 14916 AGGTTTTCAACCTCAAGATGCCACATTGGATAATAAAGAGTAGCTGCACCACCACGGACA 14975 |||||||| || || | |||||| | || || | | || ||||| || ||||| ||| Sbjct 362 AGGTTTTCTACTTCTAAATGCCAAAGCGGGTAGAACAAGGTTGCTGCGCCGCCACGTACA 303 Query 14976 CCGCCTTGAGAACAAGATTTTACTGCAGTCTGAAAATGTTTCCAGAAAGGAATTACGCCA 15035 |||||||| ||||| ||| || || || ||||| || || | |||||||| || Sbjct 302 CCGCCTTGCGAACAGCTTTTAACCGCTGTTTGAAAGTGCTTATAAAAAGGAATACAACCC 243 Query 15036 GTATGTTTTACTTCGCCATTACCAATTTTTGAGCCTTCAGCTCGAATCATACCGGCGTTG 15095 ||||| | |||||||||| | ||| | || || ||||| ||| ||||| Sbjct 242 GTATGGTACGCTTCGCCATTGCGAATGTGGCTACCCAGTGCACGAATGCGACCTGCGTTA 183 Query 15096 ATGCCTATACCAGCTCGCTTGCTGATA--TACTTAATAATACTG-TTACTTGCT-GCATT 15151 ||||| || || || || |||| |||| || |||| ||| || || | | || || Sbjct 182 ATGCCAATGCCGGCACG-TTGC-GATACGTATTTAACAAT--TGCAGACGAGGTGGCGTT 127 Query 15152 AATAGAATTCAGTGAATCGCCAGCTTCAATAACTACACAAGAACTAAACTGACGAGTAGG 15211 ||| |||| || |||||| || || | |||||| || |||||||| || || || Sbjct 126 AATTGAATCAAGGCTGTCGCCACACTCTATTAATACACACGAGCTAAACTGGCGTGTTGG 67 Query 15212 AGTACGAGCCCCTGCCATAATCGGTGTAGGCAATGAAAT 15250 |||||| | ||||||||||| || ||||| | |||||| Sbjct 66 CGTACGAACACCTGCCATAATTGGCGTAGGTAGTGAAAT 28 >seq494957 Length=669 Score = 82.4 bits (90), Expect = 8e-11 Identities = 65/77 (84%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 103768 TGGTGGCCCCTGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCGCCTGCTCTAACC 103827 ||||||||||| | |||| |||| | |||| | ||||||||||||| |||||||||| Sbjct 70 TGGTGGCCCCTCCCAGACTCGAACTGGGGACCTAACGATTATGAGTCGTGTGCTCTAACC 129 Query 103828 -ACTGAGCTAAGGGGCC 103843 |||||||||||||||| Sbjct 130 AACTGAGCTAAGGGGCC 146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 502466387175280