Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_027345.1
Length=73008
Score E
Sequences producing significant alignments: (Bits) Value
seq486019 336 1e-87
seq488807 190 9e-44
seq255804 163 1e-35
seq523594 96.9 2e-15
>seq486019
Length=823
Score = 336 bits (372), Expect = 1e-87
Identities = 573/824 (70%), Gaps = 5/824 (1%)
Strand=Plus/Plus
Query 68081 CATCCACCCACAGCCAGTCTTCGTTGTGGGAGTAAGCCCAGACACTGATCACACTGAAGT 68140
|||| ||||| | ||| || | |||| ||||||||| ||| | |||||||| |
Sbjct 1 CATCAACCCAGAACCAATCACCATTGTTATTGTAAGCCCACACAGATAAAACACTGAAAT 60
Query 68141 CACTCGCCTTCTTCGCAGAGGTAGCGAAGTCAGTGGTGATGTAGAAGTTGTACCGCTTCT 68200
| | |||| || || || |||||||| || || ||||||||| || |
Sbjct 61 CCGCAGAGGTCTTTTCACTAGTTGCAAAGTCAGTTGTTATATAGAAGTTGAACTTACCTT 120
Query 68201 TGTTGTCCAGTACGTTGCGCC-GCATGTACCAAGCCACCTCACCATCCTGGATGAGACGG 68259
| || | | ||| || | | ||||||| | |||| ||| || || |||||
Sbjct 121 TATTTTTTAATACAA-GCTCATGTCTGTACCAGTTAATATCACAATCTTGAATTAGACGA 179
Query 68260 TCTTCGTCGGACATGATCTGGAGCATAAGCTCCTGGTTGAATGTCTCGATCTTCCCTGCC 68319
|| ||||| |||||||| | | ||||||||| ||||| ||||| || | ||| ||||||
Sbjct 180 TCCTCGTCTGACATGATTCGTAACATAAGCTCTTGGTTAAATGTATCCACCTTACCTGCC 239
Query 68320 TTCTTGGCCAGGGTGTACTTCTGCAACACGAAGTCGTAGGTGAATCGGTCAGCCCAAGCA 68379
|| || ||||| || | || || || | || | ||| || |||| ||| |||
Sbjct 240 TTAAAAGCTTTAGTGTATTTGTCTAAAACAAATTGATATGAGAAACGATCAGGCCACGCA 299
Query 68380 CCCCTGAACTCTTCCCGTGAGCACGGGAATCTCTCGCACACAGGGTAGACGTTGACCTTC 68439
|| || || |||| | | || || || | | ||||||||||| ||||| || |
Sbjct 300 CCTCTAAAGTCTTTCTCTTCACAAGGAAAATTAGCACACACAGGGTACACGTTAACTGCC 359
Query 68440 CAGGCACCAGACTCCACTGCTTTGTACAGTGGATCCTTCGCGTTGAACGGTGTACCCGAC 68499
|| ||||||||||| ||||||||||| | |||||| || ||| || || ||||| |||
Sbjct 360 CAAGCACCAGACTCAACTGCTTTGTATAATGGATCACGCGAGTTAAAGGGAGTACCTGAC 419
Query 68500 CAGATGATCAT-GTTCTTCTTCGGGTGCAGTGCGTAGTCCACTGCCTTGTACACCGTGTC 68558
||||| | | | | | | || |||| | ||||||||| | ||||||||||| || ||
Sbjct 420 CAGATTACCTTAGAGCGTATT-GGGTCTAATGCGTAGTCAATAGCCTTGTACACTGTATC 478
Query 68559 TTCGATGGCTGCGATGACGGTTGGCGAGCGAGCATCTTCGTCCGAAACCAAGTCATCCAG 68618
||| | || | || || || | || | |||||||| ||||| | |||||||| ||
Sbjct 479 TTCTACAGCAGAAATAACTGTAGCTGACCTCGCATCTTCATCCGATATTAAGTCATCTAG 538
Query 68619 TACCGCAAGCTGCGGTCGCTTACCCATCTCCTTCGCACCACGGACACCAGTCTTGGCACC 68678
||| |||||| || || ||||||||| || |||||||| ||||| ||||| || ||
Sbjct 539 TACAGCAAGCACTGGACGAACACCCATCTCTTTAGCACCACGTACACCGGTCTTTGCGCC 598
Query 68679 GTAGCCCTTGACGATGAAGACCTTCCCGTCCAGGTTCGTGAACTTCCAGCGGATGTCAGT 68738
|| || || ||||| || || || || | ||| | || | |||||| || |||||
Sbjct 599 ATAACCTTTTACGATAAATCGGTTACCATCAATGTTATTAAATTCCCAGCGTATATCAGT 658
Query 68739 GAAGTTGGTTTGGGGGATGTACTTCTTCAGGAACTCGGAGTTCTCCCAGCGGAACTCCAG 68798
||| | || | || | ||||| | || || ||||| ||||| ||||||||||
Sbjct 659 GAACCTAGTGT-AGGTACATACTTAAGTAAAAATTCTGAGTTTTCCCAACGGAACTCCAA 717
Query 68799 GTTCTTACGCATGTTCTTCACACCGTTGTCGATGGAGTCCGACACGTACAGAGCAAGGTC 68858
|||||||||||||||||| |||||||| || || || || || |||||||| | |
Sbjct 718 GTTCTTACGCATGTTCTTAACACCGTTCTCTATACTATCTGAAACATACAGAGCCAAGGG 777
Query 68859 TACCTTACCGAAACCAGGAAGCTCACCGTACAGTGCAATGTACA 68902
|| ||||| || || || | |||||||| || |||||||
Sbjct 778 AACTTTACCAAACCCGGGGATGTCACCGTAACAAGCTATGTACA 821
>seq488807
Length=774
Score = 190 bits (210), Expect = 9e-44
Identities = 311/444 (70%), Gaps = 8/444 (2%)
Strand=Plus/Minus
Query 68116 GCCCAGACACTGATCACACTGAAGTCACTCGCCTTCTTCGCAGAGGTAGCGAAGTCAGTG 68175
||||| ||| || || || ||||| || |||| || ||||||| || || || ||
Sbjct 440 GCCCATACAGATATTACGCTAAAGTCGCTAGCCTCTTTTTCAGAGGTTGCAAAATCCGTA 381
Query 68176 GTGATGTAGAAGTTGTACCGCTTCTTG----TTGTCCAGTACGTTGCGCCGCATGTACCA 68231
|||||||||||||||||| || |||| || ||| | || || || ||||||
Sbjct 380 GTGATGTAGAAGTTGTAC-GCGTCTTTACTCTTAAGAAGTGCATTACGT-GC--GTACCA 325
Query 68232 AGCCACCTCACCATCCTGGATGAGACGGTCTTCGTCGGACATGATCTGGAGCATAAGCTC 68291
| | ||||| ||| | || | | |||||| || ||||| || ||||| | |||
Sbjct 324 ATTAATCTCACTATCTTTAATTAATCTGTCTTCTTCTGACATAATTCTTAGCATCAACTC 265
Query 68292 CTGGTTGAATGTCTCGATCTTCCCTGCCTTCTTGGCCAGGGTGTACTTCTGCAACACGAA 68351
||||| || | || | ||| ||||| || || |||||| | || || || |
Sbjct 264 TTGGTTAAAAGAATCCACCTTACCTGCTTTAACAGCTTTGGTGTATTGCTTCATTACATA 205
Query 68352 GTCGTAGGTGAATCGGTCAGCCCAAGCACCCCTGAACTCTTCCCGTGAGCACGGGAATCT 68411
||| || ||||| || |||| ||| | || |||||||||| | | || || ||| |
Sbjct 204 GTCATACGTGAAGCGATCAGGCCATGAGCCTTTGAACTCTTCTCTCGTACAAGGAAATTT 145
Query 68412 CTCGCACACAGGGTAGACGTTGACCTTCCAGGCACCAGACTCCACTGCTTTGTACAGTGG 68471
||| ||||||||||| || || || | ||| || || ||||| ||||||||||||| |||
Sbjct 144 CTCACACACAGGGTACACATTTACGTACCAAGCTCCTGACTCAACTGCTTTGTACAATGG 85
Query 68472 ATCCTTCGCGTTGAACGGTGTACCCGACCAGATGATCATGTTCTTCTTCGGGTGCAGTGC 68531
|| ||||| ||||| ||||| |||||||| || | ||| | || |||| |||
Sbjct 84 GTCACGGGCGTTAAACGGAGTACCTGACCAGATTATTTTAGACTTGGTAGGATGCAATGC 25
Query 68532 GTAGTCCACTGCCTTGTACACCGT 68555
||| |||||||| || || || ||
Sbjct 24 GTAATCCACTGCTTTATAAACTGT 1
>seq255804
Length=3791
Score = 163 bits (180), Expect = 1e-35
Identities = 471/719 (66%), Gaps = 13/719 (2%)
Strand=Plus/Plus
Query 68372 CCCAAGCACCCCTGAACTCTTCCCGTGAGCACGGGAATCTCTCGCACACAGGGTAGACGT 68431
|||| || || | |||||||| | | || || || |||| || | ||| || ||
Sbjct 2268 CCCATGCTCCTTTAAACTCTTCTCTAGTACAAGGAAACTTCTCACATATAGGATATACAC 2327
Query 68432 TGACCTTCCAGGCACCAGACTCCACTGCTTTGTACAGTGGATCCTTCGCGTTGAACGGTG 68491
| || | ||| |||||||| |||| |||| |||| ||||| || || || || || |
Sbjct 2328 TTACATCCCATGCACCAGATTCCATAGCTTCATACAAAGGATCATTAGCATTAAAGGGAG 2387
Query 68492 TACCCGACCAGATGATCATGTTCTTCTTCGGGTGCAGTGCGTAGTCCACTGCCTTGTACA 68551
|||| ||| || || | |||||| ||||| ||||| || | | |||| |
Sbjct 2388 TACCAAGCCATATAGTCTTAGACTTCTTAGGGTGAAGTGCATACTTAATAGCCTGACCTA 2447
Query 68552 CCGTGTCTTCGATGGCTGCGATGACGGTTGGCGAGCGAGCATCTTCGTCCGAAACCAAGT 68611
| ||||||| || ||| || || || || || || | || || | ||| ||||
Sbjct 2448 CTGTGTCTTTAATAGCTTGAATAACTGTAGGTGAACGTGAGTCATCATTACTAACTAAGT 2507
Query 68612 CATCCAGTACCGCAAGCTGCGGTCGCTTACCCATCTCCTTCGCACCACGGACACCAGTCT 68671
|||| || | || | ||| || || |||||||||||||| ||||||| | ||| ||||
Sbjct 2508 CATCTAGGATAGCCATCTGTGGGCGTGTACCCATCTCCTTCACACCACGAATACCTGTCT 2567
Query 68672 TGGCACCGTAGCCCTTGACGATGAAGACCTTCCCGTCCAGGTTCGTGAACTTCCAGCGGA 68731
||||||| || ||||| || | ||| | || | | ||| | |||| ||| | |
Sbjct 2568 TGGCACCATACCCCTTTACTACGAATTTAGTACCATTAATATTCTTAAACTCCCACCTAA 2627
Query 68732 TGTCAGTGAAGTT------GGTTTGGGGGATGTACTTCTTCAGGAACTCGGAGTTCTCCC 68785
| || |||| || || || | ||||||| | |||||| ||||||
Sbjct 2628 TATCTGTGAGCTTTAATCCTTCTTTAGGTAGATACTTCTGTAAGAACTCACTACTCTCCC 2687
Query 68786 AGCGGAACTCCAGGTTCTTACGCATGTTCTTCACACCGTTGTCGATGGAGTCCGACACGT 68845
| || |||| | |||||| | ||| ||| | |||||| || || || || || |
Sbjct 2688 AACGAGACTCTAAGTTCTTTCTCATTGACTTAATACCGTTATCAATACTATCTGATACAT 2747
Query 68846 ACAGAGCAAGGTCTACCTTACCGAAACCAGGAAGCTCACCGTACAGTGC-AATGTACAGG 68904
|||| | | | |||||||| || || | ||||||| || || || | |
Sbjct 2748 ACAGCACTAATTTAACCTTACCAAAGGACGGCATTCTGCCGTACACCGCTAAGATATAAG 2807
Query 68905 AACAGGTACTCACCCATCACGGTAGTCTTGGCCGCACCACGGAAGACCATGTTGGCGATC 68964
| ||||||||| |||| | |||||||| | |||||||| |||| |||||| || |
Sbjct 2808 ATAAGGTACTCAGCCATTAGTGTAGTCTTACCTGCACCACGAAAGATCATGTTAGC--TA 2865
Query 68965 CGAGTCT--GGCCAGAGCCAATCTGGTCAAGCATCCGTAGGTGAAGCACTGGTGTCTTGT 69022
|| ||| ||| | | || || | |||| || ||||| || |||| ||
Sbjct 2866 CGTTTCTTAATCCACCATCTAACTTATCTAACATCTTTAAGTGAATAACAGGTGATACGT 2925
Query 69023 TCTCTTCCCCTTCGTTACCGTTGACCATCTTGATGAA-GTCAACGAACTGCAAGGCAAA 69080
|||| || || || ||| || || | ||| || || ||||| ||||| ||| |||||
Sbjct 2926 TCTCCTCACCCTCACCACCATTAACTAGCTTAATAAACGTCAA-GAACTCCAATGCAAA 2983
>seq523594
Length=514
Score = 96.9 bits (106), Expect = 2e-15
Identities = 71/83 (86%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 34538 ATCCAGAAGCGGTCTACGTTGAAGCCAGCTTCAACAGTCCGGCCATCGTTGTAGACACCG 34597
|||||||||||||| |||| ||| || ||||| ||||| || ||||||||||| ||||||
Sbjct 512 ATCCAGAAGCGGTCCACGTCGAAACCGGCTTCTACAGTGCGACCATCGTTGTACACACCG 453
Query 34598 AAGCCACCGACCAAACCATTCAC 34620
|| ||||| | ||||||||| ||
Sbjct 452 AAACCACCAATCAAACCATTGAC 430
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 232005331137918
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |