Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_027356.1
Length=108065
Score E
Sequences producing significant alignments: (Bits) Value
seq426744 199 3e-46
seq507483 140 2e-28
seq511551 134 9e-27
seq435060 131 1e-25
seq506238 125 5e-24
seq466100 116 3e-21
seq508595 82.4 5e-11
>seq426744
Length=341
Score = 199 bits (220), Expect = 3e-46
Identities = 205/264 (78%), Gaps = 3/264 (1%)
Strand=Plus/Plus
Query 90284 ACGTTGCAGGTTAACACGCTGAGTAACGTAGTATGCGTCACGCTGTTTGCCAGCTTGGCG 90343
|||||| ||||||| ||| ||||| ||||||||||| ||||| || || |||||||| ||
Sbjct 78 ACGTTGTAGGTTAAGACGTTGAGTTACGTAGTATGCATCACGTTGCTTACCAGCTTGACG 137
Query 90344 CTCACGTTCAACAGTAACAGCACGCTGACGTGGCATCACGAAGTTATCTTTATAAACAAT 90403
||||||||| || |||| || ||| ||||| || | |||||||| || ||||| ||
Sbjct 138 CTCACGTTCTACTGTAATAGTACGTTGACGAGGAACAACGAAGTTCTCACGGTAAACGAT 197
Query 90404 AACTGCGAACTCTTTACCAGCTGCTTTAGCTGGGAAGTACTCAGAAACTACAACCGGCAG 90463
| ||| ||| || | ||||||||||||||||| | |||||||| ||| | ||
Sbjct 198 AGTACAGAATTCTGAACTGACAGCTTTAGCTGGGAAGTAGTTAGAAACTAGAACTGCTAG 257
Query 90464 ACCATAAATACGACCAACCTGACCCTGCAG-TTTAAC-AG-CATCATTACCAACCTGAGC 90520
||| || ||||||||||| || || || || |||||| || ||| |||||| ||
Sbjct 258 ACCGTAGATACGACCAACTTGTCCTTGAAGTTTTAACGAGTTATCCGCACCAACTTGGTT 317
Query 90521 AACATCCTGCCATTCTTCATCTTC 90544
||||||||||||||||||||||||
Sbjct 318 AACATCCTGCCATTCTTCATCTTC 341
>seq507483
Length=1083
Score = 140 bits (154), Expect = 2e-28
Identities = 484/739 (65%), Gaps = 27/739 (4%)
Strand=Plus/Plus
Query 60399 TACTTATGTTGAGAAGATTCTACTGAGTATTGATGCAGATGGTTGCATT--CGTACTGGT 60456
||||||||| ||||| || | ||||| ||||||| |||| ||||| ||
Sbjct 344 TACTTATGTAATTAAGATGTTAGACAACATTGACCGAGATGGT--CATTTACGTACAGGG 401
Query 60457 TTCCATGAACATATGACTACTTCTGGTCGTCTGAGTTCTTCTGGTAAACTGAACCTGCAA 60516
|| |||| | ||| ||||| |||||||| ||||| || || ||||| ||| | ||
Sbjct 402 TTTAGCCAACACACGACCACTTCGGGTCGTCTAAGTTCATCAGGCAAACTTAACTTACAG 461
Query 60517 CAGTTACCACGTGATGAATCTATCATTAAGGGTTGTGTAGTTGCACCACCTGGATACCGT 60576
|| | || |||||||| |||| ||||||| ||| | || || || | || || |
Sbjct 462 CAACTTCCTCGTGATGATGCTATGGTTAAGGGATGTATTGTAGCTCCTGCGGGCTATAGA 521
Query 60577 GTAATCGCATGGGACTTAACAACTGCGGAAGTTTATTATGCTGCTGTTCTATCTGGTGAT 60636
||| | || ||| | |||||||||| | | || || | || ||| |||
Sbjct 522 GTAGTAGCCGTGGATATGGAAACTGCGGAAATGTGGGTAGCAGCAGCACTTAGTGGGGAT 581
Query 60637 AGAA-ATATGCAACAAGTATTT-ATTAATATGAGAAATGAACCTGATAAATACCCTGACT 60694
| || | | || |||| ||| | ||||| | | || | || | ||||
Sbjct 582 AAAAGACCTACAGAAAGTGTTTTAACGATATGGCTGACAAGTCTATTGTATCTGCCGACT 641
Query 60695 TCCAC---TCTAACATCGCTCACATGGTATTTAAATTGCAATGTGAACCTCGTGATGTTA 60751
||||| |||| | || |||||||| || || | ||| | | | ||| |||
Sbjct 642 TCCACAGCTCTA---TTGCACACATGGTGTTCAAGCCAAACTGTCTAGCGCATGAA-TTA 697
Query 60752 AAAAGT-TATTCCCAGCTCTGCGTCAAGCAGCTAAGGCAATTACCTTTGGTATTTTGTAC 60810
||| | | ||||| || | ||||| || |||| || ||| | || |||||| | | |
Sbjct 698 AAAGCTATGTTCCCTGCATTACGTCAGGCTTCTAAAGCTATTTCATTCGGTATTCTATTC 757
Query 60811 GGTTCTGGCCCGGCTAAAGTAGCACATTCTGTTAACGAAGCATTGCTAGAACAAGCAGCC 60870
||| ||| || ||||| |||||| | ||| |||| || | | | || ||| |
Sbjct 758 GGTAGTGGACCAGCTAAGGTAGCAGAATCTATTAATGAGTCGCTATTTGAGCAACATGTA 817
Query 60871 AAAACTGGGGAACCATTTGTTGAATGTACTGTTGCAGAT---GCTAAAGAGTACATTGAG 60927
|| || ||| || || ||| || || | ||| |||||||| ||||||||
Sbjct 818 AAGAC-GGGTTGCCCTTAC--GAACCTATTGATAAAGAAACAGCTAAAGATTACATTGAT 874
Query 60928 ACTTACTTTGGTCAATTCCCACAGCTTAAGCGTTGGATTGATAAGTGCCACGATCAGATC 60987
||||||| ||| ||||| | || || ||||||||||| || ||| || |||||
Sbjct 875 GTTTACTTTAGTCGTTTCCCTGACCTGAAACGTTGGATTGACGCGTCCCATGAGCAGATT 934
Query 60988 AAGAATCATGGATTTATCTATAGTCACTTTGGTCGTAAACGTCGTCTGCATAATATCCAC 61047
| ||||| ||||| ||||| ||||| || ||||||||| | || | |||||||| |
Sbjct 935 CTACAGCATGGGTTTATTTATAGCCACTTCGGACGTAAACGTAGACTACGTAATATCCGC 994
Query 61048 TC--CGAAGACCGTG-GTGTTCAGGGTGAAGA-AATCCGTTCTGGATTTAACGCAATCAT 61103
|| || | | | |||| |||||||| | ||||| || || ||||| |||||
Sbjct 995 TCAGCGTCTAGAGAGACTGTT---GGTGAAGAGCTTACGTTCAGGCTTCAACGCTATCAT 1051
Query 61104 TCAGTCTGCTTCTTCTGAT 61122
||| || || ||||||
Sbjct 1052 TCAAGGGGCATCATCTGAT 1070
>seq511551
Length=634
Score = 134 bits (148), Expect = 9e-27
Identities = 265/381 (70%), Gaps = 12/381 (3%)
Strand=Plus/Plus
Query 44565 TGCTGTGTACGCTACTGAGCTTACTGAAAAAGAGTGTTATGATGCATTCCAAGCCCTAGA 44624
|||||| || || || || | || || |||||| ||||||||| |||||| || ||
Sbjct 13 TGCTGTTTATGCAACGAAGATGACAGAGAAAGAGACTTATGATGCTTTCCAAAGTCTTGA 72
Query 44625 GTATGAAACTAATTCATTATTTAACTCTAACGGACAGA-CTCCTTTTGTTACGCTTGGCT 44683
||| |||| ||| | ||| | | || ||||| | | |||||||| ||| | || |
Sbjct 73 GTACGAAATTAACACCTTACACACAGCAAATGGACAAAGCCCCTTTTGT-ACGGTAGGTT 131
Query 44684 TTGGGCTAGGACAGGGGTGGGAGGAAAGGATGATTCAGAAAGCCATCCTCCAAAACCGTA 44743
|||| |||| | |||||| | | | ||||||||| ||||||| | ||||
Sbjct 132 TTGGTTTAGGTACTTGTTGGGAGTCTAAGCTAATTCAGAAATCCATCCTTGAGGTGCGTA 191
Query 44744 TTAAAGGTTTAGGTGCTGCTGAGTCAACCCCTATCTTCCCTAAACTAGTATTCT--CAGT 44801
||||||| |||||||| | || || | | |||||||| || ||| || | |
Sbjct 192 TTAAAGGCTTAGGTGCATCAAAGAGGACAGCGGTATTCCCTAAGCT--TATCCTAACTAT 249
Query 44802 TAAAGAAGG-ATTAAATAAAAATCCAGG-CGATCCTAACTACGATATAAAACAGCTAGCA 44859
|||||| || | || | ||| |||| || || ||||| |||| |||||| ||||
Sbjct 250 TAAAGACGGTGTCAACTTTAAA--CAGGAAGACCCAAACTATAATATTAAACAGTTAGCT 307
Query 44860 CTTGAGTGTTCTGCTACCCGTATGTACCCGGACTATT-TAAGTTACGAGAAAGTTGTAGC 44918
|| |||||| | || ||||||||||| || |||| | | ||||| || ||||||
Sbjct 308 CTAGAGTGTGCCAGTAAGCGTATGTACCCTGA-TATTATCAACTACGATAAGATTGTAGA 366
Query 44919 TGTTACTGGTGATTTTAAAGC 44939
|||||||||| |||||| ||
Sbjct 367 GGTTACTGGTGGTTTTAAGGC 387
>seq435060
Length=507
Score = 131 bits (144), Expect = 1e-25
Identities = 323/489 (66%), Gaps = 17/489 (3%)
Strand=Plus/Plus
Query 60659 TTAATATGAGAAATGAACCTGATAAATACCCTGACTTCCACTCTAACATCGCTCACATGG 60718
|||| |||| | | || ||| || || || ||||||||| |||||| ||||||||||
Sbjct 21 TTAAGATGAAAGAAGATCCTACCAAGTATCCCGACTTCCACAGTAACATAGCTCACATGG 80
Query 60719 TATTTAAATTGCAATGTGAACCTCGTGATGTTAAAAAGTTATTCCCAGCTCTGCGTCAAG 60778
| ||||| | | ||| | ||| || ||||| || |||||||||| || | || |
Sbjct 81 TGTTTAACCTACCTTGTAAGCCTGAGGAAGTTAAGAAACTATTCCCAGCCCTAAGGCAGG 140
Query 60779 CAGCTAAGGCAATTACCTTTGGTATTTTGTACGGTTCTGGCCCGGCTAAAGTAGCACATT 60838
| || ||||| || || ||||||||| | | |||||| || | || |||||| |
Sbjct 141 CTGCGAAGGCGATAACATTTGGTATTCTATTCGGTTCAGGAGCAGCATCTGTAGCAGAGC 200
Query 60839 CTGTTAACGAAGCATTGCTAGAACAAGCAGCCAAAACTGGGGAACCATTTGTTGAATGTA 60898
|||||| ||| ||||||| | || ||| || | ||| ||||
Sbjct 201 AAGTTAACTTAGCTAAGCTAGAATTA------------GGTGAAGCA---GCTGATTGTA 245
Query 60899 CTGTTGCAGATGCTAAAGAGTACATTGAGACTTACTTTGGTCAATTCCC-ACAGCTTAAG 60957
|| | | || || ||||| || ||||| | ||||| | | | |||
Sbjct 246 CTAAAGAAATCGCCGCAGGTTACATCGAAGTGTACTTCAAGCGGTTCCCTAGACTTAAAG 305
Query 60958 CGTTGGATTGATAAGTGCCACGATCAGATCAAGAATCATGGATTTATCTATAGTCACTTT 61017
|| ||||||||| || || ||| | ||| | | |||||||| || | |||||
Sbjct 306 CG-TGGATTGATTCTTGTCATGATGAAATCCGTCAGAAAGGATTTATATACAACCACTTC 364
Query 61018 GGTCGTAAACGTCGTCTGCATAATATCCACTCCGAAGACCGTGGTGTTCAGGGTGAAGAA 61077
|| ||||| ||| | | || || ||| || || | || ||| |||| ||||
Sbjct 365 GGCCGTAAGCGTAGATTACACAACATCTCTTCTAGCGATAGAGGCGTTGTAGGTGGAGAA 424
Query 61078 ATCCGTTCTGGATTTAACGCAATCATTCAGTCTGCTTCTTCTGATAGTCTCCTTTTAGGT 61137
|||||||| |||||||| || ||||| |||||||| || |||||| | || ||||
Sbjct 425 ATCCGTTCAGGATTTAATGCTATCATACAGTCTGCGTCATCTGATCACTTACTGCTAGGA 484
Query 61138 GCTGTAGAT 61146
|||||||||
Sbjct 485 GCTGTAGAT 493
>seq506238
Length=275
Score = 125 bits (138), Expect = 5e-24
Identities = 132/172 (77%), Gaps = 4/172 (2%)
Strand=Plus/Plus
Query 24590 GTAAATGTACGACTAATAACATCGTTCTGCTGTTCACGCGTCAGTGCGTTAAAACGTACA 24649
||||||||||| | | || || | ||| ||||| | || | || ||||||||| ||
Sbjct 52 GTAAATGTACGTGTTAATACGTCTTGCTGTTGTTCTGGTGTTAATGAGTTAAAACGCACT 111
Query 24650 GCGTACCCTGAAACACGGATAGTTAATTGAGGGTATTTTTCAGGATGTTTCTGTGCATC- 24708
||||| ||||| ||||| ||||||||||| || ||||||||||| ||||| |||||
Sbjct 112 GCGTAACCTGATACACGAATAGTTAATTGTGGATATTTTTCAGGGTGTTTAACAGCATCT 171
Query 24709 -CAAAAGCTGATCACGACTTAACACATTGACATTTAGGTGTTGACCCCCTTC 24759
| || | | ||||||| ||||||||| || |||| |||||||| |||||
Sbjct 172 TCCAATGTT--TCACGACGTAACACATTCACGTTTAAATGTTGACCACCTTC 221
>seq466100
Length=556
Score = 116 bits (128), Expect = 3e-21
Identities = 156/212 (74%), Gaps = 10/212 (5%)
Strand=Plus/Plus
Query 90977 ATCCGGTTCAACCAACATAGTAAGAATCTTACTGGACATCGGCAGTTCTTCGAACA-GTG 91035
||| || |||| || |||||||||||||||||| | ||| || || |||||||| | ||
Sbjct 5 ATCTGGCTCAATCATCATAGTAAGAATCTTACTAGTCATTGGAAGCTCTTCGAATAAGTT 64
Query 91036 CGC--CAACTACTAGCTCTTTCTGCAGGTCACGGATAATACGCTGAGAGAAAATAGTTTC 91093
| |||| | || || |||||| ||||| | ||||| |||||||||||||| ||
Sbjct 65 ACCTACAACCATTAACT---TCTGCATATCACGTAGGATACGTTGAGAGAAAATAGTCTC 121
Query 91094 ATAGCTTTCACTAGAAACTTCTACAGAAGAGGACT--GATTCACTGCTTTCAGGTGTTTT 91151
||| | |||||||||||||| | | || ||| ||||| ||||| ||||| |
Sbjct 122 GTAGTTCTCACTAGAAACTTCGATACTTGA--ACTTGCGTTCACAGCTTTAAGGTGAGCT 179
Query 91152 TGACCGTGTTCGGTTTCGAATACGCCTTTTTC 91183
| ||| | || |||||| || | ||||||||
Sbjct 180 TCACCATATTTGGTTTCAAACATTCCTTTTTC 211
>seq508595
Length=419
Score = 82.4 bits (90), Expect = 5e-11
Identities = 65/77 (84%), Gaps = 1/77 (1%)
Strand=Plus/Minus
Query 25586 TGGTGCGGGATACGAGAGTCGAACTCGTGTCTACTGGTTGGAAGCCAGTTATTCTAGCCG 25645
|||||||| || |||| |||||||| |||||||| |||||||||||||||||| ||
Sbjct 354 TGGTGCGGAATTAGAGATTCGAACTCTAATCTACTGGGTGGAAGCCAGTTATTCTA-CCA 296
Query 25646 CTGAACTAATCACGCAT 25662
|||||||||| |||||
Sbjct 295 TTGAACTAATCCCGCAT 279
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 343469252716972
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |