Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_027379.1
Length=43642
Score E
Sequences producing significant alignments: (Bits) Value
seq494738 150 5e-32
seq441498 100 8e-17
seq502596 82.4 2e-11
>seq494738
Length=508
Score = 150 bits (166), Expect = 5e-32
Identities = 317/473 (67%), Gaps = 0/473 (0%)
Strand=Plus/Plus
Query 37142 GATATCTATGCAGGTGACAAAGCTTCTATCAAAGGCTTTGAGATTCACTATACTTTACGT 37201
|||| |||||||| || | ||| || || || ||||| |||| | || |||
Sbjct 28 GATAAGTATGCAGGAGATAGAGCCTCAATAGAATCTTTTGATGTTCATTGGGTGTTCCGT 87
Query 37202 GGTAGTGATAAATCACCATCAGTTGCATGTTACTCAATTGAAGCTGGTATGCAAGGTGCT 37261
|| ||| || || ||||| ||| | |||||||| || || | || || || |||
Sbjct 88 GGAGCTGACAAGTCTCCATCCGTTCCTTGTTACTCTATCGAGTCAGGAGCACAGGGCGCT 147
Query 37262 CGTGCAGATATCATCTTAGCAGACGACGTAGAGTCATTACAAAACTCAAGGACGGCAGCA 37321
||||| ||||| || | ||||| || | ||||| ||||| ||||| | | | ||
Sbjct 148 CGTGCTGATATAATAATTGCAGATGATATTGAGTCCTTACAGAACTCTCGTTCAGTTGCT 207
Query 37322 GGTCGTGCTTTGTTAGAGGATTTAACTAAAGAGTTTGAATCTATCAACCAATTTGGTGAT 37381
|| |||| | ||| ||| || |||||| || |||||||||||||||||| ||
Sbjct 208 GGCCGTGAATGGTTGATGGAGCAGACCTTAGAGTTCGAGTCTATCAACCAATTTGGTCAT 267
Query 37382 ATTATCTACCTAGGTACACCTCAAAGTGTTAACTCTATCTACAACAATTTGCCTGCTCGT 37441
||||| ||| |||| ||||| || || || | |||||||||||| ||||| ||||
Sbjct 268 ATTATATACTTAGGCACACCACAGAGCGTGGAGTCTATCTACAACTGGCTGCCTAGTCGT 327
Query 37442 GGTTATCAAATCCGTATATGGCCTGGTCGTTATCCTACTTTAGAGCAAGAAGCATGTTAT 37501
|| || | | ||||| ||| | ||| | || |||||| ||| | | |||
Sbjct 328 GGCTACAAGGTTCGTATCTGGACAGGTAGATACCCTACTGCTTCTCAAATGGAGTATTAC 387
Query 37502 GGTGACTTCCTAGCTCCTATGATTAAGCAGGATATGACAGAAGACCCTAGCTTACGTCAT 37561
||| |||| ||| | || | || || | | | |||||||| ||||| |
Sbjct 388 AAGGACAAAATAGCACCTCTTATATACCATGACTTAATACAAGACCCTTCCTTACAGGTT 447
Query 37562 GGTTATGGTATTGATGGAACACAAGGTGCTCCTACTTGTCCTGAGATGTATGA 37614
|| |||||||||||| || || ||||||||||| |||||||| ||
Sbjct 448 GGCGGTGGTATTGATGGCACTATGGGACAGCCTACTTGTCCAGAGATGTACGA 500
>seq441498
Length=539
Score = 100 bits (110), Expect = 8e-17
Identities = 202/297 (68%), Gaps = 2/297 (1%)
Strand=Plus/Plus
Query 37442 GGTTATCAAATCCGTATATGGCCTGGTCGTTATCCTACTTTAGAGCAAGAAGCATGTTAT 37501
|||||| || | ||||| ||| | || ||||| ||||| || || || || ||
Sbjct 24 GGTTATAAAGTTCGTATCTGGACAGGGCGTTACCCTACAAATGAACAGCTAGAATACTAC 83
Query 37502 GGTGACTTCCTAGCTCCTATGATTAAGCAGGATATGACAGAAGA-CCCTAGCTTACGTCA 37560
||||| ||||||||||| ||| || ||| | | | || | ||| | ||||
Sbjct 84 GGTGATAAACTAGCTCCTATTATTCGTCATGATTT-AGATAACAACCCAATGTTACAGAT 142
Query 37561 TGGTTATGGTATTGATGGAACACAAGGTGCTCCTACTTGTCCTGAGATGTATGACGATGA 37620
||| |||| ||||||| | || ||||| || ||||| |||||| | ||||
Sbjct 143 AGGTGGTGGTCTTGATGGCTCTATGGGACAGCCTACCTGCCCTGAAATGTATACCAATGA 202
Query 37621 GAAGCTTATTGAGAAGGAGATATCACAAGGTACAGCTAAGTTCCAGTTACAGTTTATGCT 37680
| | | ||||||||| | |||| |||| |||||||||| | |||||||||||||
Sbjct 203 TATCTTGAATGAGAAGGAATTGGCACAGGGTAAAGCTAAGTTCATGCTACAGTTTATGCT 262
Query 37681 CAATACAAGACTGCTGGACGCTGACAGATATCCTTTAAAACTCAATCAGTTAATCAT 37737
||||| |||| || || ||||||| || | ||||| | | | ||||||||
Sbjct 263 TAATACTGGACTTGCAGATGCAGACAGATTCCCACTCAAACTAAGTGACTTAATCAT 319
>seq502596
Length=783
Score = 82.4 bits (90), Expect = 2e-11
Identities = 142/201 (71%), Gaps = 9/201 (4%)
Strand=Plus/Plus
Query 19298 AGCTGGTCACAAAGGTTGGCGACAAACTAAGATAGTGCGCAG-TGTAACTTATGACTTAC 19356
|||||| || ||||| ||||| | | |||| || || | ||| | |||||||||||
Sbjct 296 AGCTGGACATAAAGGCTGGCGCAAGATGAAGAAGGTTCGTGGCTGTGA-TTATGACTTAC 354
Query 19357 TATGTATCGGATATGAAGAAGGCAAAGGTAAGTACAAAGGTAAAGTTGCAAACTTAGTAT 19416
| ||||| || ||||| ||||||| |||||||| ||||| || || || || | | |
Sbjct 355 TTTGTATTGGCTATGAGGAAGGCACTGGTAAGTATAAAGGCAAGGTAGCTAATCTGCTGT 414
Query 19417 TTCAATGGCATAAAGGT---AAGACAGTCAAGGCCATGTTAGGAAAAGGCTGGACTCATG 19473
|| | ||| |||||| || || |||| || ||| | || | || ||||||||||
Sbjct 415 TTAAGTGG---AAAGGTAACAAAACCATCAAAGCTATGCTTGG-CAGGGTTGGACTCATG 470
Query 19474 ATGATGCTGAATTTATGTTTA 19494
| || ||| | ||||||
Sbjct 471 CTATGGCAGAAGATTTGTTTA 491
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 138662068410096
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |