Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_027387.1
Length=38810
Score E
Sequences producing significant alignments: (Bits) Value
seq512931 138 3e-28
>seq512931
Length=538
Score = 138 bits (152), Expect = 3e-28
Identities = 369/553 (67%), Gaps = 52/553 (9%)
Strand=Plus/Plus
Query 3016 CCTGCTAGTCCTGACCACT-CTCCTAGTGTGAAGTCAGTAGGTATCACTGGTCAGT-TAA 3073
|||||| ||||||||||| | ||| | |||||||| || ||| | ||||| | || | |
Sbjct 1 CCTGCTCGTCCTGACCACAGCCCCTCG-GTGAAGTCCGTGGGTGTTACTGG-CGGTATGA 58
Query 3074 CTGGTAGCCGTGCTGATATTATCATTGCGGATGACGTTGAGATTCCGTCTAACAGTGCAA 3133
|||||||||||||||| || |||||||||||||||||||| | || ||| || |
Sbjct 59 CTGGTAGCCGTGCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCA 118
Query 3134 CTATGGGTGCCCGTGAAAAGCTATGGACTCTCGTTCAGGAGTTCGCTGCGTTGCTTAAAC 3193
| | || | || | || | || || |||| |||| |||| | || || |
Sbjct 119 CACAGTCCGCAAGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGC 178
Query 3194 CACTGCCTACTTCTCGTGTCATCTATCTGGGTACACCTCAAACTGAGATGACTCTCTATA 3253
| || || || ||||||| |||| || || || || || ||||| ||||| |
Sbjct 179 C--TG---ACGGTACGA-TCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACA 232
Query 3254 AGGAACTTGAAGATAACCGTGGGTACTCCACTATCATCTGGCCTGCTCTGTATCCAAGGA 3313
||||||||| || ||| || ||||| || | ||||||||||| | || || ||
Sbjct 233 GGGAACTTGAGGA---CCGCGGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGGG 289
Query 3314 CTCGCGAGGAAAACCT------CTACT---ACTCTCAG------------CGTCTGGCAC 3352
| | || |||| ||||| || | || ||||||| |
Sbjct 290 AT---GTGGCTGACCTTGAGTCCTACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACC 346
Query 3353 ---CAATGCTCC--GTGCTG-AGTACGAGGAGAATCCTGAGGCGCTCGCTGGGACTCCTA 3406
| |||||| | |||| | |||| ||||| | | || ||| ||||
Sbjct 347 TTACCATGCTCAAGGAGCTGGAAGACGACGAGAAGCT------GTTCT---GGAAGCCTA 397
Query 3407 CGGACCCTGTGCGCTTCGACCGTGATGACCTGCGTGAGCGTGAGTTGGAATACGGTAAGG 3466
| |||||| | || ||||| ||| |||||||||||||| || | ||| || ||||
Sbjct 398 CAGACCCTATTCGATTCGATGATGAAGACCTGCGTGAGCGCGAACTCTCATATGGCAAGG 457
Query 3467 CTGGCTTCACGTTACAGTTCATGCTTAACCCGAACCTGAGTGATGCCGAGAAGTACCCTC 3526
||||||| | ||||||||||||| ||||||||||| || || ||||||||||||
Sbjct 458 GTGGCTTCGCTCTACAGTTCATGCTCAACCCGAACCTTAGCGACATCGAGAAGTACCCGT 517
Query 3527 TGAGGCTCCGTGA 3539
||| ||| |||||
Sbjct 518 TGAAGCTGCGTGA 530
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 123296158985328
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |