Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_027388.1
Length=73050
Score E
Sequences producing significant alignments: (Bits) Value
seq486019 327 5e-85
seq488807 199 2e-46
seq255804 170 9e-38
seq523594 105 3e-18
seq505100 105 3e-18
seq513583 100 1e-16
seq513438 100 1e-16
seq469180 100 1e-16
>seq486019
Length=823
Score = 327 bits (362), Expect = 5e-85
Identities = 474/665 (71%), Gaps = 3/665 (0%)
Strand=Plus/Plus
Query 70466 TCACCATCCTGGATGAGCCGGTCTTCGTCGGACATGATCTGGAGCATAAGCTCCTGGTTG 70525
|||| ||| || || || || || ||||| |||||||| | | ||||||||| |||||
Sbjct 159 TCACAATCTTGAATTAGACGATCCTCGTCTGACATGATTCGTAACATAAGCTCTTGGTTA 218
Query 70526 AACGTCTCGATCTTCCCTGCCTTCTTGGCCAGGGTGTACTTCTGCAACACGAAGTCGTAG 70585
|| || || | ||| |||||||| || ||||| || | || || || | ||
Sbjct 219 AATGTATCCACCTTACCTGCCTTAAAAGCTTTAGTGTATTTGTCTAAAACAAATTGATAT 278
Query 70586 GTGAATCGGTCAGGCCATGCACCACGGAACTCTTCCCGCGAGCAGGGGAACCGCTCACAT 70645
| ||| || |||||||| ||||| | || |||| | || || || ||||
Sbjct 279 GAGAAACGATCAGGCCACGCACCTCTAAAGTCTTTCTCTTCACAAGGAAAATTAGCACAC 338
Query 70646 ACCGGGTAGACGTTGACCTTCCAAGCACCAGACTCCACTGCTTTGTACAATGGATCCTTC 70705
|| ||||| ||||| || ||||||||||||||| ||||||||||| |||||||| |
Sbjct 339 ACAGGGTACACGTTAACTGCCCAAGCACCAGACTCAACTGCTTTGTATAATGGATCACGC 398
Query 70706 GCGTTGAACGGTGTACCCGACCAGATGATCAT-GTTCTTCTTCGGGTGCAGTGCATAGTC 70764
| ||| || || ||||| |||||||| | | | | | | || |||| | ||| |||||
Sbjct 399 GAGTTAAAGGGAGTACCTGACCAGATTACCTTAGAGCGTATT-GGGTCTAATGCGTAGTC 457
Query 70765 CACTGCCTTGTACACCGTGTCCTCAATGGCTGCGATGACAGTGGGCGAGCGAGCATCTTC 70824
| ||||||||||| || || || | || | || || || | || | ||||||||
Sbjct 458 AATAGCCTTGTACACTGTATCTTCTACAGCAGAAATAACTGTAGCTGACCTCGCATCTTC 517
Query 70825 GTCCGAAACCAAGTCATCCAGTACCGCAAGCTGCGGACGTTTACCCATCTCCTTCGCACC 70884
||||| | |||||||| ||||| |||||| ||||| ||||||||| || |||||
Sbjct 518 ATCCGATATTAAGTCATCTAGTACAGCAAGCACTGGACGAACACCCATCTCTTTAGCACC 577
Query 70885 ACGGACACCAGTCTTGGCACCGTAGCCTTTGACGATGAACACCTTCCCATCCAGGTTGGT 70944
||| ||||| ||||| || || || ||||| ||||| || || ||||| | ||| |
Sbjct 578 ACGTACACCGGTCTTTGCGCCATAACCTTTTACGATAAATCGGTTACCATCAATGTTATT 637
Query 70945 GAACTTCCAACGGATATCAGTGAAGCTGGTTTGGGGGATGTACTTTCTCAGGAACTCGGA 71004
|| | ||| || ||||||||||| || || | || | ||||| | || || ||
Sbjct 638 AAATTCCCAGCGTATATCAGTGAACCTAGTGT-AGGTACATACTTAAGTAAAAATTCTGA 696
Query 71005 GTTCTCCCAACGGAACTCCAGGTTCTTCCGCATGTTCTTCACACCGTTGTCGATGGAGTC 71064
||| |||||||||||||||| |||||| ||||||||||| |||||||| || || ||
Sbjct 697 GTTTTCCCAACGGAACTCCAAGTTCTTACGCATGTTCTTAACACCGTTCTCTATACTATC 756
Query 71065 CGACACATACAGAGCTAGGTCTACCTTCCCGAAACCAGGAAGCTCACCGTACAGTGCAAT 71124
|| ||||||||||| | | || || || || || || | |||||||| || ||
Sbjct 757 TGAAACATACAGAGCCAAGGGAACTTTACCAAACCCGGGGATGTCACCGTAACAAGCTAT 816
Query 71125 GTACA 71129
|||||
Sbjct 817 GTACA 821
>seq488807
Length=774
Score = 199 bits (220), Expect = 2e-46
Identities = 352/504 (70%), Gaps = 12/504 (2%)
Strand=Plus/Minus
Query 70285 CATGTCCTGGCGTTCACAGATACCATCTACCCACAGCCAGTCCT-CGTTGTGGGAGTAG- 70342
|||||| || | || || ||||| |||||||| | ||| | | | | || | ||
Sbjct 498 CATGTCTTGTTGCTCGCAAATACCGTCTACCCAGAACCA--CGTACCATCTGAGCTAAGC 441
Query 70343 GCCCAGACACTGATGATGCTGAAGTCGCTGGCCTTCTTCGCAGAGGTAGCAAAGTCAGTG 70402
||||| ||| || | ||| |||||||| |||| || ||||||| ||||| || ||
Sbjct 440 GCCCATACAGATATTACGCTAAAGTCGCTAGCCTCTTTTTCAGAGGTTGCAAAATCCGTA 381
Query 70403 GTGACGTAGAAGTTGTACCGCTTCTTGT-TGTCCAGCA---CGTTGCGTCGCATGTACCA 70458
|||| ||||||||||||| || |||| | | || | | || ||| || ||||||
Sbjct 380 GTGATGTAGAAGTTGTAC-GCGTCTTTACTCTTAAGAAGTGCATTACGT-GC--GTACCA 325
Query 70459 AGCCACCTCACCATCCTGGATGAGCCGGTCTTCGTCGGACATGATCTGGAGCATAAGCTC 70518
| | ||||| ||| | || | | |||||| || ||||| || ||||| | |||
Sbjct 324 ATTAATCTCACTATCTTTAATTAATCTGTCTTCTTCTGACATAATTCTTAGCATCAACTC 265
Query 70519 CTGGTTGAACGTCTCGATCTTCCCTGCCTTCTTGGCCAGGGTGTACTTCTGCAACACGAA 70578
||||| || | || | ||| ||||| || || |||||| | || || || |
Sbjct 264 TTGGTTAAAAGAATCCACCTTACCTGCTTTAACAGCTTTGGTGTATTGCTTCATTACATA 205
Query 70579 GTCGTAGGTGAATCGGTCAGGCCATGCACCACGGAACTCTTCCCGCGAGCAGGGGAACCG 70638
||| || ||||| || |||||||||| || ||||||||| | || || || ||
Sbjct 204 GTCATACGTGAAGCGATCAGGCCATGAGCCTTTGAACTCTTCTCTCGTACAAGGAAATTT 145
Query 70639 CTCACATACCGGGTAGACGTTGACCTTCCAAGCACCAGACTCCACTGCTTTGTACAATGG 70698
|||||| || ||||| || || || | |||||| || ||||| |||||||||||||||||
Sbjct 144 CTCACACACAGGGTACACATTTACGTACCAAGCTCCTGACTCAACTGCTTTGTACAATGG 85
Query 70699 ATCCTTCGCGTTGAACGGTGTACCCGACCAGATGATCATGTTCTTCTTCGGGTGCAGTGC 70758
|| ||||| ||||| ||||| |||||||| || | ||| | || |||| |||
Sbjct 84 GTCACGGGCGTTAAACGGAGTACCTGACCAGATTATTTTAGACTTGGTAGGATGCAATGC 25
Query 70759 ATAGTCCACTGCCTTGTACACCGT 70782
|| |||||||| || || || ||
Sbjct 24 GTAATCCACTGCTTTATAAACTGT 1
>seq255804
Length=3791
Score = 170 bits (188), Expect = 9e-38
Identities = 474/719 (66%), Gaps = 15/719 (2%)
Strand=Plus/Plus
Query 70600 CCATGCACCACGGAACTCTTCCCGCGAGCAGGGGAACCGCTCACATACCGGGTAGACGTT 70659
|||||| || |||||||| | | || || ||| |||||||| || || || |
Sbjct 2269 CCATGCTCCTTTAAACTCTTCTCTAGTACAAGGAAACTTCTCACATATAGGATATACACT 2328
Query 70660 GACCTTCCAAGCACCAGACTCCACTGCTTTGTACAATGGATCCTTCGCGTTGAACGGTGT 70719
|| | ||| |||||||| |||| |||| ||||| ||||| || || || || || ||
Sbjct 2329 TACATCCCATGCACCAGATTCCATAGCTTCATACAAAGGATCATTAGCATTAAAGGGAGT 2388
Query 70720 ACCCGACCAGATGATCATGTTCTTCTTCGGGTGCAGTGCATAGTCCACTGCCTTGTACAC 70779
||| ||| || || | |||||| ||||| |||||||| | | |||| ||
Sbjct 2389 ACCAAGCCATATAGTCTTAGACTTCTTAGGGTGAAGTGCATACTTAATAGCCTGACCTAC 2448
Query 70780 CGTGTCCTCAATGGCTGCGATGACAGTGGGCGAGCGAGCATCTTCGTCCGAAACCAAGTC 70839
||||| | ||| ||| || || || || || || | || || | ||| |||||
Sbjct 2449 TGTGTCTTTAATAGCTTGAATAACTGTAGGTGAACGTGAGTCATCATTACTAACTAAGTC 2508
Query 70840 ATCCAGTACCGCAAGCTGCGGACGTTTACCCATCTCCTTCGCACCACGGACACCAGTCTT 70899
||| || | || | ||| || ||| |||||||||||||| ||||||| | ||| |||||
Sbjct 2509 ATCTAGGATAGCCATCTGTGGGCGTGTACCCATCTCCTTCACACCACGAATACCTGTCTT 2568
Query 70900 GGCACCGTAGCCTTTGACGATGAACACCTTCCCATCCAGGTTGGTGAACTTCCAACGGAT 70959
|||||| || || || || | ||| | |||| | || | |||| ||| | ||
Sbjct 2569 GGCACCATACCCCTTTACTACGAATTTAGTACCATTAATATTCTTAAACTCCCACCTAAT 2628
Query 70960 ATCAGTG------AAGCTGGTTTGGGGGATGTACTTTCTCAGGAACTCGGAGTTCTCCCA 71013
||| ||| || | || || | ||||| | |||||| |||||||
Sbjct 2629 ATCTGTGAGCTTTAATCCTTCTTTAGGTAGATACTTCTGTAAGAACTCACTACTCTCCCA 2688
Query 71014 ACGGAACTCCAGGTTCTTCCGCATGTTCTTCACACCGTTGTCGATGGAGTCCGACACATA 71073
||| |||| | |||||| | ||| ||| | |||||| || || || || |||||
Sbjct 2689 ACGAGACTCTAAGTTCTTTCTCATTGACTTAATACCGTTATCAATACTATCTGATACATA 2748
Query 71074 CAGAGCTAGGTCTACCTTCCCGAAACCAGGAAGCTCACCGTACAGTGC-AATGTACAGGA 71132
||| ||| | ||||| || || || | ||||||| || || || | ||
Sbjct 2749 CAGCACTAATTTAACCTTACCAAAGGACGGCATTCTGCCGTACACCGCTAAGATATAAGA 2808
Query 71133 ACAGGTACTCACCCATCACGGTGGTCTTCGCTGCACCACGGAACACCATGTTGGCGATCC 71192
||||||||| |||| | || ||||| |||||||||| || | |||||| || | |
Sbjct 2809 TAAGGTACTCAGCCATTAGTGTAGTCTTACCTGCACCACGAAAGATCATGTTAGC--TAC 2866
Query 71193 GGGTCTGA--CCA-GATCCAATCTGGTCAAGCATTCGCAGGTGAAGTACTGGTGTCTTGT 71249
| ||| | ||| ||| || || || | ||| | ||||| || |||| ||
Sbjct 2867 GTTTCTTAATCCACCATCTAA-CTTATCTAACATCTTTAAGTGAATAACAGGTGATACGT 2925
Query 71250 TCTCTTCCCCTTCGTTGCCGTTGACCATCTTGATGAA-GTCAACGAACTGCAAGGCAAA 71307
|||| || || || || || || | ||| || || ||||| ||||| ||| |||||
Sbjct 2926 TCTCCTCACCCTCACCACCATTAACTAGCTTAATAAACGTCAA-GAACTCCAATGCAAA 2983
>seq523594
Length=514
Score = 105 bits (116), Expect = 3e-18
Identities = 73/83 (88%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 36759 ATCCAGAAGCGGTCTACGTTGAAGCCAGCTTCGACAGTGCGTCCGTCGTTGTACACACCG 36818
|||||||||||||| |||| ||| || ||||| |||||||| || |||||||||||||||
Sbjct 512 ATCCAGAAGCGGTCCACGTCGAAACCGGCTTCTACAGTGCGACCATCGTTGTACACACCG 453
Query 36819 AAGCCACCAACCAAACCATTCAC 36841
|| ||||||| ||||||||| ||
Sbjct 452 AAACCACCAATCAAACCATTGAC 430
>seq505100
Length=723
Score = 105 bits (116), Expect = 3e-18
Identities = 327/502 (65%), Gaps = 12/502 (2%)
Strand=Plus/Plus
Query 70589 AATCGGTCAGGCCATGCACCACGGAACTCT--TCCCGCGAGCAGGGGAACCGCTCACATA 70646
|| |||||| |||||| || |||||| | || | || || ||| ||||||||
Sbjct 216 AAGCGGTCATCCCATGCGCCTTTAAACTCTGATTCCTCA--CAAGGAAACTTCTCACATA 273
Query 70647 CCGGGTAGACGTTGACCTTCCAAGCACCAGACTCCACTGCTTTGTACAATGGATCCTTCG 70706
| || || || || | ||||||||||||||| | |||| || || ||||| || |
Sbjct 274 CTGGATAAACACCTACATCCCAAGCACCAGACTCAATAGCTTGATATAAAGGATCGTTAG 333
Query 70707 CGTTGAACGGTGTACCCGACCAGATGATCATGTTCTTCTTCGGGTGCAGTGCATAGTCCA 70766
| || || || ||||| ||| || || | ||| | ||||| | ||||| | |
Sbjct 334 CATTAAAGGGAGTACCAAGCCATATTCTCTTAGACTTAGTTGGGTGTAACGCATACTTAA 393
Query 70767 CTGCCTTGTACACCGTGTCCTCAATGGCTGCGATGACAGTGGGCGAGCGAGCATCTTCGT 70826
|||| || || |||| ||| | | || |||| || || | | ||||||||
Sbjct 394 TAGCCTGACCAACTGTATCCTTAATAGATTGAATAGCAGTAGGTGATCTTGAATCTTCGT 453
Query 70827 CCGAAACCAAGTCATCCAGTACCGCAAGCTGCGGACGTTTACCCATCTCCTTCGCACCAC 70886
|||||||||||||| || ||| ||||||||| |||| || || |||||
Sbjct 454 TACTAACCAAGTCATCCATTATACCAATCTGCGGACGCATACCATATTCTTTAAAACCAC 513
Query 70887 GGACACCAGTCTTGGCACCGTAGCCTTTGACGATGAACACCTTCCCATCCAGGTTGGTGA 70946
| ||||||| ||| ||||| | ||| | || || | |||| || | |
Sbjct 514 GAACACCAGACTTAGCACCAAACCCTCTTACACAAAATTTACTACCATTGGTATTCATAA 573
Query 70947 ACTTCCAACGGATATCAGTGAAGCTGGT------TTGGGGGATGTACTTTCTCAGGAACT 71000
||| |||||| ||||||| || || | || || ||||| || | |||||
Sbjct 574 ACTCCCAACGCTTATCAGTAAATCTCATATTCTCTTCTGGTATGTATTTAAGTAAGAACT 633
Query 71001 C-GGAGTTCTCCCAACGGAACTCCAGGTTCTTCCGCATGTTCTTCACACCGTTGTCGATG 71059
| | |||| ||| |||| | |||||| | ||| || | |||||||| || |||
Sbjct 634 CACTATTTCT-AATACGAGACTCTAAGTTCTTTCTCATATTACTAACACCGTTCTCCATG 692
Query 71060 GAGTCCGACACATACAGAGCTA 71081
|| || || | ||||||| |||
Sbjct 693 GAATCAGAAATATACAGACCTA 714
>seq513583
Length=228
Score = 100 bits (110), Expect = 1e-16
Identities = 117/158 (74%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 70811 GAGCGAGCATCTTCGTCCGAAACCAAGTCATCCAGTACCGCAAGCTGCGGACGTTTACCC 70870
||||| |||||||| || || | || || |||||||| ||||| || |||||||||
Sbjct 212 GAGCGTGCATCTTCATCTGATATTAAATCGTCCAGTACAGCAAGTACAGGTCGTTTACCC 153
Query 70871 ATCTCCTTCGCACCACGGACACCAGTCTTGGCACCGTAGCCTTTGACGATGAACACCTTC 70930
|| || || |||||||| ||||| || || || || |||||||| || || || ||
Sbjct 152 ATTTCTTTTGCACCACGCACACCCGTTTTAGCTCCATAGCCTTTCACTATAAAACGATTA 93
Query 70931 CCATCCAGGTTGGTGAACTTCCAACGGATATCAGTGAA 70968
||||| | ||| | || | |||||| ||||| || ||
Sbjct 92 CCATCTACGTTATTAAATTCCCAACGTATATCTGTAAA 55
>seq513438
Length=501
Score = 100 bits (110), Expect = 1e-16
Identities = 238/356 (67%), Gaps = 8/356 (2%)
Strand=Plus/Minus
Query 71022 CCAGGTTCTTCCGCATGTTCTTCACACCGTTGTCGATGGAGTCCGACACATACAGAGCTA 71081
||| ||| || ||||| ||||| || || || || ||| || || || || || || |
Sbjct 501 CCAAGTTTTTACGCATATTCTTAACGCCATTCTCAATGCTATCTGATACGTATAGCGCCA 442
Query 71082 GGTCTACCTTCCCGAAACCAGGAAGCTCACCGTACAGTGCAATGTACAGGAACAGGTACT 71141
| || || ||||| || || | | ||||||| | | |||||||| |||||||
Sbjct 441 AGGGAACTTTACCGAATCCCGGGATTGCTCCGTACACGCCTAAATACAGGAATAGGTACT 382
Query 71142 CACCCATCACGGTGGTCTTCGCTGCACCACGGA-ACACCATGTTGGCGATCCGGG---TC 71197
|||| | || | ||||| | |||||| ||| | ||| | | || ||
Sbjct 381 CACCAAATACTGCTGTCTTGCCCAAACCACGATGACAT-AGGTTTATGGTATTGGCTTTC 323
Query 71198 TGACCAGATCCAATCTGGTCAAGCATTCGCAGGTGAAGTACTGGTGTCTTGTTCTCTTCC 71257
|| ||| | | ||| || | ||||| ||||||| |||||| || ||||| |||||
Sbjct 322 TGGCCACTTAC---CTGATCCAACATTCTAAGGTGAACTACTGGCGTTTTGTTTTCTTCA 266
Query 71258 CCTTCGTTGCCGTTGACCATCTTGATGAAGTCAACGAACTGCAAGGCAAAGATGCTGGGG 71317
|| || |||||| ||||| || |||||| |||||||| | ||||| |||||
Sbjct 265 CCGTCTGAGCCGTTTACCATTTTAATGAAGGTAACGAACTCTACTGCAAACTCACTGGGT 206
Query 71318 ATGTACGAAGAGTCATCCCCATAGACTACTTCACGAAGCCATTGCTCTACAGACTT 71373
|| || || ||| | | |||| ||| || || |||||||||||| | |||
Sbjct 205 ATATAGCAATCGTCGTACGAATAGTTTACGTCGTTAATCCATTGCTCTACCGTCTT 150
>seq469180
Length=838
Score = 100 bits (110), Expect = 1e-16
Identities = 265/401 (66%), Gaps = 3/401 (1%)
Strand=Plus/Minus
Query 66579 TCAGCAGTGGAGATGTCCAGCTTGAGATCGAAGTTACCAGCAAGGTCATCCCTGCGGATA 66638
|||| ||| || || ||||| | ||| |||||||||||||||||||| | |||
Sbjct 422 TCAGTAGTAGATATAGTTAGCTTAACATCAAAGTTACCAGCAAGGTCATCACGTTTAATA 363
Query 66639 TCCACGAAGTGCTCGTTGGTGATCCGTACCACTTCCACATCGTCCAGGAACTCAGCGTTC 66698
||||| | |||| || || |||| ||||| | || || | |||| ||||||
Sbjct 362 GTAACGAACTCTTCGTCAGTAATTCGTATAACTTCTTCTTCTTCTAAGAACAAGGCGTTC 303
Query 66699 ATGGCGATGATCTTCCGCCCGATCTCGATGATCCCAGCAGAGAGGCGGCGAAGGATTCCA 66758
|| || ||||| || || ||||| || || ||| | | || | ||| ||
Sbjct 302 ATACTTATAATCTTACGGCCAATCTCTTCAATGCCTGCACCTA-TCTACGTAAGATACCT 244
Query 66759 AGCTCACGCTTCGATGCAGCATCCAATGCACCACGTACAGCAGTAGCGGTATCACCGAGT 66818
| |||||| || || |||| |||| ||||||||| || | | | |||||||| | |
Sbjct 243 ATCTCACGTTTAGAAGCAGAGTCCATTGCACCACGAGCATTACCAACAGTATCACCAAAT 184
Query 66819 GCAGCACCGGAGATGCCAGCGTTGAAAGCCTTCACACCAGTCATGGATTCAGCTTCTGCC 66878
||| |||| | |||| | || || || | ||| || | |||||||||||
Sbjct 183 GCATCACCACTTACACCAGTACTAAATGCTTTGATACCTGTTAATGATTCAGCTTCATTG 124
Query 66879 TGTTGCAGGTTGATCATGTAC-TGAGCGGACTGAGGGATCTCCGGGAAGGTGTGCATGTG 66937
||||||| | | ||| ||| |||| ||||| | | ||| || | | |||||||
Sbjct 123 TGTTGCATACTAAGCAT-TACAGGAGCTGACTGTGAAAGCTCAGGATACTTATGCATGTA 65
Query 66938 CACAGCAGCCCGTGGGTCTGCACCAGGGTTGAACTCGTAGT 66978
| || | ||| || ||||| |||| |||||||||
Sbjct 64 AAATGCTTTACTTGGATCAACACCACCGTTGTACTCGTAGT 24
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 232138870365642
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