Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_027390.1
Length=45169
Score E
Sequences producing significant alignments: (Bits) Value
seq494738 143 8e-30
seq441498 100 8e-17
seq502596 89.7 1e-13
>seq494738
Length=508
Score = 143 bits (158), Expect = 8e-30
Identities = 312/467 (67%), Gaps = 0/467 (0%)
Strand=Plus/Plus
Query 37845 TATGCAGGTGACAAAGCTTCTATAAAAGGCTTTGAGATTCACTATACTTTACGTGGTAGT 37904
|||||||| || | ||| || ||| || ||||| |||| | || ||||| |
Sbjct 34 TATGCAGGAGATAGAGCCTCAATAGAATCTTTTGATGTTCATTGGGTGTTCCGTGGAGCT 93
Query 37905 GATAAATCACCATCAGTTGCATGTTACTCAATTGAAGCTGGTATGCAAGGTGCGCGTGCA 37964
|| || || ||||| ||| | |||||||| || || | || || || || |||||
Sbjct 94 GACAAGTCTCCATCCGTTCCTTGTTACTCTATCGAGTCAGGAGCACAGGGCGCTCGTGCT 153
Query 37965 GATATCATCTTAGCAGACGACGTAGAGTCATTACAGAACTCAAGGACGGCAGCAGGTCGT 38024
||||| || | ||||| || | ||||| ||||||||||| | | | || || |||
Sbjct 154 GATATAATAATTGCAGATGATATTGAGTCCTTACAGAACTCTCGTTCAGTTGCTGGCCGT 213
Query 38025 GCTTTGTTAGAGGATTTAACTAAAGAGTTTGAATCTATCAACCAATTTGGTGATATTATC 38084
| | ||| ||| || |||||| || |||||||||||||||||| |||||||
Sbjct 214 GAATGGTTGATGGAGCAGACCTTAGAGTTCGAGTCTATCAACCAATTTGGTCATATTATA 273
Query 38085 TACCTAGGTACACCTCAAAGTGTTAACTCTATCTACAACAATTTACCTGCTCGTGGTTAT 38144
||| |||| ||||| || || || | |||||||||||| | ||| |||||| ||
Sbjct 274 TACTTAGGCACACCACAGAGCGTGGAGTCTATCTACAACTGGCTGCCTAGTCGTGGCTAC 333
Query 38145 CAAATCCGTATATGGCCGGGTCGTTATCCTACTTTAGAGCAAGAAGCATGTTATGGTGAC 38204
| | ||||| ||| | ||| | || |||||| ||| | | ||| |||
Sbjct 334 AAGGTTCGTATCTGGACAGGTAGATACCCTACTGCTTCTCAAATGGAGTATTACAAGGAC 393
Query 38205 TTCCTAGCTCCTATGATTAAGCAGGATATGACAGAAGACCCTAGCTTACGTCACGGTTAT 38264
|||| ||| | || | || || | | | |||||||| ||||| || |
Sbjct 394 AAAATAGCACCTCTTATATACCATGACTTAATACAAGACCCTTCCTTACAGGTTGGCGGT 453
Query 38265 GGTATTGATGGAACACAAGGTGCGCCTACTTGCCCTGAGATGTATGA 38311
||||||||||| || || ||||||||| || |||||||| ||
Sbjct 454 GGTATTGATGGCACTATGGGACAGCCTACTTGTCCAGAGATGTACGA 500
>seq441498
Length=539
Score = 100 bits (110), Expect = 8e-17
Identities = 202/297 (68%), Gaps = 2/297 (1%)
Strand=Plus/Plus
Query 38139 GGTTATCAAATCCGTATATGGCCGGGTCGTTATCCTACTTTAGAGCAAGAAGCATGTTAT 38198
|||||| || | ||||| ||| | || ||||| ||||| || || || || ||
Sbjct 24 GGTTATAAAGTTCGTATCTGGACAGGGCGTTACCCTACAAATGAACAGCTAGAATACTAC 83
Query 38199 GGTGACTTCCTAGCTCCTATGATTAAGCAGGATATGACAGAAGA-CCCTAGCTTACGTCA 38257
||||| ||||||||||| ||| || ||| | | | || | ||| | ||||
Sbjct 84 GGTGATAAACTAGCTCCTATTATTCGTCATGATTT-AGATAACAACCCAATGTTACAGAT 142
Query 38258 CGGTTATGGTATTGATGGAACACAAGGTGCGCCTACTTGCCCTGAGATGTATGACGATGA 38317
||| |||| ||||||| | || |||||| |||||||| |||||| | ||||
Sbjct 143 AGGTGGTGGTCTTGATGGCTCTATGGGACAGCCTACCTGCCCTGAAATGTATACCAATGA 202
Query 38318 GAAGCTTATTGAGAAGGAGATATCACAAGGTACAGCTAAGTTTCAGTTACAGTTTATGCT 38377
| | | ||||||||| | |||| |||| ||||||||| | |||||||||||||
Sbjct 203 TATCTTGAATGAGAAGGAATTGGCACAGGGTAAAGCTAAGTTCATGCTACAGTTTATGCT 262
Query 38378 CAACACAAGACTACTGGACGCTGACAGATATCCTTTAAAACTCAATCAGTTAATCAT 38434
|| || |||| || || ||||||| || | ||||| | | | ||||||||
Sbjct 263 TAATACTGGACTTGCAGATGCAGACAGATTCCCACTCAAACTAAGTGACTTAATCAT 319
>seq502596
Length=783
Score = 89.7 bits (98), Expect = 1e-13
Identities = 131/180 (73%), Gaps = 9/180 (5%)
Strand=Plus/Plus
Query 20233 AGCTGGTCATAAAGGTTGGAGACAAACTAAGATAGTACGCAG-TGTAACTTATGACTTAC 20291
|||||| |||||||| ||| | | | |||| || || | ||| | |||||||||||
Sbjct 296 AGCTGGACATAAAGGCTGGCGCAAGATGAAGAAGGTTCGTGGCTGTGA-TTATGACTTAC 354
Query 20292 TATGTATCGGATATGAAGAAGGTAAAGGTAAGTACAAAGGTAAAGTTGCAAACTTAATAT 20351
| ||||| || ||||| ||||| | |||||||| ||||| || || || || | | |
Sbjct 355 TTTGTATTGGCTATGAGGAAGGCACTGGTAAGTATAAAGGCAAGGTAGCTAATCTGCTGT 414
Query 20352 TTCAATGGCATAAAGGT---AAGACAGTCAAAGCTATGTTAGGCAAAGGCTGGACTCATG 20408
|| | ||| |||||| || || ||||||||||| | ||| | || ||||||||||
Sbjct 415 TTAAGTGG---AAAGGTAACAAAACCATCAAAGCTATGCTTGGC-AGGGTTGGACTCATG 470
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 143517975631044
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |