Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_027399.1 Length=346602 Score E Sequences producing significant alignments: (Bits) Value seq522464 174 3e-38 seq522740 159 8e-34 seq243124 147 5e-30 seq507425 120 7e-22 seq510726 109 1e-18 seq506238 104 5e-17 seq513882 102 2e-16 seq451481 93.3 9e-14 seq230881 93.3 9e-14 seq311881 87.8 4e-12 seq508035 86.0 1e-11 seq351952 84.2 5e-11 >seq522464 Length=411 Score = 174 bits (192), Expect = 3e-38 Identities = 201/268 (75%), Gaps = 7/268 (3%) Strand=Plus/Minus Query 107078 GGTGTTAGCGTTGGATTCCATGATCCTGATACATGGATCAGTACTGGTAATTATGCACTT 107137 ||| | ||||| || ||||||||||| || |||||||||||||||| |||||||| Sbjct 335 GGTATGAGCGTCGGTTTCCATGATCCAACCACTTGGATCAGTACTGGTAGCTATGCACTA 276 Query 107138 AATTATCGTATTAGTGGTTACTTTGATCGTGGTATTCCACTAGGAAAAGT---TGTAATG 107194 || |||||||| || ||||||| |||||||||||||||| ||||| |||| Sbjct 275 AACTATCGTATGGCAAGTCGCTTTGATGGTGGTATTCCACTAGGCAAAGTAACTGTA--- 219 Query 107195 TTTGCAGGTGAATCTGGTGCAGGTAAATCATTCCTAGCTTCTGGTAA-TATAGCTCGTGA 107253 || || |||||||| ||||||||||| || ||| | | || ||||| || |||||| Sbjct 218 TTCGCTGGTGAATCAGGTGCAGGTAAGTCGTTCATCGTATCAGGTAACGTTATTTCGTGA 159 Query 107254 AGCACAAAAACAAGGTATTTTTGTAGTACTAATCGATTCAGAGAACGCTCTTGATTCTGA 107313 ||| |||||||||||||| | |||| | || || || || ||||| |||||| | Sbjct 158 AGCGCAAAAACAAGGTATATATGTATTCTGTATAGACTCTGAAAACGCACTTGATGACAA 99 Query 107314 TTGGTTAGAATCTTTAGGAGTAGATACT 107341 |||||| ||||||| || |||||| Sbjct 98 ATGGTTAACTGCTTTAGGTGTTGATACT 71 >seq522740 Length=346 Score = 159 bits (176), Expect = 8e-34 Identities = 219/303 (72%), Gaps = 5/303 (2%) Strand=Plus/Minus Query 103040 AGAGATTATGGAACGTATTCAATTCGCATATGAATTATGTCCTGATTTTATACGTGATGG 103099 ||| ||||||| |||| | | | | |||| ||| |||||| ||||| |||||||| | Sbjct 310 AGAAATTATGGGACGTGTGCGCTACTCATACGAAGAATGTCCAGATTTCATACGTGAAGC 251 Query 103100 TGTAGAAAAATATAACGTAACT--GAAGTTCGTTTTGAAAATAAATCTCGAATTATTGCT 103157 | | | |||||| || | ||| || || | ||| || || || ||||| | Sbjct 250 CGCCGTTGATTATAAC--AAGTTAGAAATTAAGTTCGCAAACAAGTCACGTATTATATCA 193 Query 103158 CGTGCAACAACACCAAGTGCTGCACGTGG-TTTATCTGTAAACTTATTATACTTAGATGA 103216 ||||||||||||||| ||| || ||||| |||||||||||||||||| || | ||||| Sbjct 192 CGTGCAACAACACCAGCTGCGGCTCGTGGGTTTATCTGTAAACTTATTGTATCTGGATGA 133 Query 103217 ATTTGCGTTCGTTCAGGAAAGTTTCCAAGCGGATTTTTGGTCAGCAGTATCGCCAACATT 103276 || |||||||| | || | || ||| || ||||| || ||||| || || | Sbjct 132 GTTCGCGTTCGTAATGCCAAACATTCAGAAGGAATTCTGGTCTGCGGTATCACCTACGCT 73 Query 103277 AGCATCATCTAATGGTCGTTGTATTATTACCAGTACACCAAACACTGAATATGACCAGTT 103336 |||| | || |||||||||||||||||| ||||||||||||||||| || |||| Sbjct 72 AGCAGCGACTGGTGGTCGTTGTATTATTACATCAACACCAAACACTGAATACGATAAGTT 13 Query 103337 CGC 103339 || Sbjct 12 TGC 10 >seq243124 Length=832 Score = 147 bits (162), Expect = 5e-30 Identities = 308/451 (68%), Gaps = 16/451 (4%) Strand=Plus/Minus Query 48330 AAAAAGAATGCTATTCTTACT-GGTGATGCAGGAGTCGGTAAAACTCAGATCGTCGATGG 48388 ||||| || || || |||| | ||||| ||||| || |||||||| || || || || || Sbjct 606 AAAAATAACGCAAT-CTTAGTTGGTGAAGCAGGTGTTGGTAAAACACAAATTGTTGAAGG 548 Query 48389 TTTTGCACAAGCCATTGCTGATGGTGACGTACCTGACTATCTGAAAGGTGTTGAGGTATT 48448 ||| ||| || || ||| | ||| | || |||| | ||||||||| || ||| Sbjct 547 TTTGGCAATTGCGATCGCTAAAGGTAAAGTTCCTGCTTCGCTGAAAGGTAAGCAG--ATT 490 Query 48449 ATCTCTT--AACGTTTCTGCTGTAACTGCTGGTACAAAATACCGTGGTGAATTCGAAGAA 48506 || ||| |||||| || | | ||||||| | |||| ||||||||| || |||| Sbjct 489 ATGACTTTGAACGTTGGTGATATTGTTGCTGGTGCTAAATTCCGTGGTGACTTTGAAGCT 430 Query 48507 CGTATGGAAGGTATTATTAAAGAACTTAAAAAACGAGAAAATGTAATTTTGTTCATTGAT 48566 ||||| ||| || | || || | | || ||| || ||| |||||||||| Sbjct 429 CGTATCAAAGACATCTTGAATGATTT---AGGACCTGAACAT---ATTCTGTTCATTGAC 376 Query 48567 GAAGTACATATTATGATGGGTGCTGGTGGTAG--CAGCACTGGATCTATGGATATGAGCA 48624 ||| | |||| |||||||||||||||| | | ||| |||| ||||||| | Sbjct 375 GAAATCCATACAATGATGGGTGCTGGTGCTGGTTCAGATAGTAATCT--GGATATGGCTA 318 Query 48625 ATATCATGAAACCTGCACTTTCACGTGGTGATATTCGTGTTATCGGTGCAACAACTTATG 48684 | || ||||| || || || |||||||| | ||||||| ||||| || || |||| Sbjct 317 ACATTATGAAGCCAAAGCTGTCTCGTGGTGAATTATGTGTTATTGGTGCTACTACGTATG 258 Query 48685 AGGAATATCGCCAGAACATTGAAAAAGATGCTGCATTTTCCCGCCGCTTCACTAAAATTG 48744 | ||||| | || || ||| |||||| ||| | || || ||| ||||||| Sbjct 257 ATGAATACCAAAAGCACTTTGTCAAAGATCAAGCACTAAGTCGTCGATTCCTAAAAATTG 198 Query 48745 ATGTAGTTGAACCTAGTATTAACGAAACACG 48775 |||| ||||| | | | |||||||||| Sbjct 197 ATGTCAAAGAACCAACTGCTGACGAAACACG 167 >seq507425 Length=845 Score = 120 bits (132), Expect = 7e-22 Identities = 151/202 (75%), Gaps = 4/202 (2%) Strand=Plus/Plus Query 35706 GGTGGTGGTGGTACTGATTTCGATGCAGTTTGGGAACA-TATGAAACAAGACAATTATGT 35764 |||||||||||||||||||| |||||||||| |||||| |||||| | || ||||| Sbjct 98 GGTGGTGGTGGTACTGATTTTGATGCAGTTT-GGAACAGCATGAAAGACGATGATTATCG 156 Query 35765 TCCTAAACAACTGATCATGTTTACCGATGGTGAACCATGGCAATCATGGGGTGATCCAAA 35824 || || ||||| || ||||| || |||||| | |||||| || |||||||| | | Sbjct 157 CCCAAAGCAACTAATTATGTTCACTGATGGTTATCCATGGAGCTCTTGGGGTGACGAAGA 216 Query 35825 CTATTGCAAAACTCTGTTTGTGATTCATAGTAATCCTAACAA-AGAAGCACCATTTGGTG 35883 ||| || | || | ||||| ||||| | | | | ||||| | |||||||||||| | Sbjct 217 CTACTGTGATACATTATTTGTTATTCACGGGACTAC-AACAATCGTAGCACCATTTGGCG 275 Query 35884 AAACAGTACATTACGAGTACGA 35905 | || || |||| |||| ||| Sbjct 276 AGACTGTTTATTATGAGTTCGA 297 >seq510726 Length=706 Score = 109 bits (120), Expect = 1e-18 Identities = 119/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 38389 CAACGCTCAGCAGATACATTCTTGGGAGTTCCACTGAATATCACATCATATTCAGTACTC 38448 ||||| |||||||||| ||||| || |||||| | || || | || ||| | |||| Sbjct 429 CAACGATCAGCAGATATGTTCTTAGGTGTTCCATTTAACATTGCCTCCTATGCCTTACTT 488 Query 38449 ACCCATATGATAGCACAAATTACTGGATTAGAAGTTGGTGAATTTATCTGGAACGGTGGA 38508 || |||||| |||| ||||| | ||||||| || || ||||||||| |||||| Sbjct 489 ACTCATATGTTAGCTCAAATATGTAATCTAGAAGTAGGAGAGCTTATCTGGAGAGGTGGA 548 Query 38509 GATTGTCATATTTACTTGAATCATATCGAACAAGTAAA 38546 ||||||||||| || || || ||||| || ||||| || Sbjct 549 GATTGTCATATCTATTTAAACCATATTGATCAAGTTAA 586 >seq506238 Length=275 Score = 104 bits (114), Expect = 5e-17 Identities = 125/170 (74%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 320421 GAAGGTGGTCAACATTTAAATGTAAATGTATTATCACGTTCTCAATTAGAAGAAGCACAG 320480 |||||||||||||||||||| || ||||| ||| ||| ||| ||||| || Sbjct 221 GAAGGTGGTCAACATTTAAACGTGAATGTGTTACGTCGTGAAACATTGGAAGATGCTGTT 162 Query 320481 AAATTTCCTGAAAAATATCCTCAACTTACTATTCGTGTTTCTGGATATGCAGTTCGTTTT 320540 ||| |||||||||||||| ||| | ||||||||||| || || || ||||| |||||| Sbjct 161 AAACACCCTGAAAAATATCCACAATTAACTATTCGTGTATCAGGTTACGCAGTGCGTTTT 102 Query 320541 AATTCTCTTACGAAAGAACAACAAAATGATGTAATTTCACGAACTTTCAC 320590 || || | || ||||||||| | || ||| | |||| || || || Sbjct 101 AACTCATTAACACCAGAACAACAGCAAGACGTATTAACACGTACATTTAC 52 >seq513882 Length=382 Score = 102 bits (112), Expect = 2e-16 Identities = 179/257 (70%), Gaps = 3/257 (1%) Strand=Plus/Minus Query 60093 TTGACAATTTGTACATTATCAACTGTT-GCAGTACTAATAAAAATCTGATCACTTTGAGA 60151 || ||||| | |||| ||||||| | |||||||||| ||| | || | | ||| Sbjct 343 TTAACAATCTCAACATCATCAACTACTAGCAGTACTAACAAATAACTCGTGTGGT-GAGT 285 Query 60152 TGGT-ATTTCAAATAAAGAACCAAATTTAGAATCTGGATTTTGTGATACAATAACGATTG 60210 | || |||| || || | ||| || || || | ||||| | | ||||||||||||| Sbjct 284 TAGTTATTTGGAACAACGTACCGAACTTTGACGCAGGATTCTTAGGAACAATAACGATTG 225 Query 60211 TACTAATATACCTACCTAAATTACTTTGAATATAAGTACACAAATCAGTATAATAAAAAC 60270 | |||| | ||| | |||||||| |||| | |||||| | || || Sbjct 224 AAGCGATATCAGTTGCTAGTTGTTGATGAATATATGTACTAAGTTCAGTAAAGTAGAATG 165 Query 60271 TTTCACCAAAGTCCCAGTTATCTATACTGAAGTATTCATTACAAAGAGAAATAACATTTT 60330 |||||||||| ||||| ||||| || ||||||||||||| | | ||||||| || Sbjct 164 TTTCACCAAAATCCCAATTATCAATCGCGAAGTATTCATTAATTAAACGAATAACACGTT 105 Query 60331 GTCTTATTTCATCATCA 60347 |||| |||||||||||| Sbjct 104 GTCTAATTTCATCATCA 88 >seq451481 Length=624 Score = 93.3 bits (102), Expect = 9e-14 Identities = 176/255 (69%), Gaps = 12/255 (5%) Strand=Plus/Plus Query 107795 GCTAAATGTAAAGTTATGAAGACTCGCTATAATAAACCTTTTGAGGATGTAGAAATTAAG 107854 || || |||||||| ||||| || || || || || || ||||| ||||| | | ||| | Sbjct 272 GCAAAGTGTAAAGTGATGAAAACACGTTACAACAAGCCGTTTGAAGATGTCGTA-TTACG 330 Query 107855 -ATTCCGTGGAATACTGGCATGGATCCAAGAAGTGGTTTACTTGATATGTTTGAGAAGTA 107913 ||||||| | | || ||| ||| | ||||||| | ||||||||||| | Sbjct 331 TATTCCGTATGAAGCAGGTATGTCACCATACACTGGTTTATTCGATATGTTTGA-----A 385 Query 107914 TAATTTG----ATTACA-AAAACTGGCAATAGACTTCAATACACTGATATAGATACTGGT 107968 | ||| |||| | ||| | |||||| | |||||| | ||| ||||| ||| Sbjct 386 TCTCTTGGACTATTAGAGAAATCGGGCAATCGTTATCAATATATCGATTGCGATACCGGT 445 Query 107969 GAAGTAATTATTAAATTTCGTAAAGCATGGTCTAATAATGAAGACAACTGTTTAGATTTA 108028 ||| || | | || | ||| ||||| ||| ||| || || ||||| ||||||||| | Sbjct 446 GAAATAGTACTCAAGTATCGCAAAGCTTGGGATAAAAACGAGGACAATTGTTTAGATCTT 505 Query 108029 GTAATGAATCAGTTT 108043 | ||||| |||||| Sbjct 506 ATTATGAAACAGTTT 520 Score = 89.7 bits (98), Expect = 1e-12 Identities = 137/195 (70%), Gaps = 3/195 (2%) Strand=Plus/Plus Query 107531 GGGGATATGAAGGGGGACATGGGGATAAAGGCGAAGCAGCTAAAAGCTTATATTACTCAA 107590 || || ||||| || || ||||| || |||||| ||| ||||| | | ||| | Sbjct 8 GGTGAAATGAAAGGTGATATGGGTCGTAAAGCGAAGATGCTGAAAGCATTAGTAACTAAC 67 Query 107591 TGTGTGAACTCTTTTGGTGATCTGAATATTGGTATGGTTTGTGTGAATCATTCATATTCC 107650 ||| || ||||||||||| || || || ||||| ||| ||| || | || || Sbjct 68 CTTGTCAATATGTTTGGTGATCTAAACATCGGCATGGTATGTACGAACCACACTTACGCC 127 Query 107651 TCACAAGACATGTTTAACCCAGATCCTGTTGTAGCCGGTGGTGCCGGACTTGTATATGCT 107710 || ||||| ||||| ||||| ||||| || || | |||||||| || | ||||||||| Sbjct 128 TCTCAAGATATGTTCAACCCTGATCCAGTAGTCTCTGGTGGTGCAGGTTTCGTATATGCT 187 Query 107711 ---TCTTCTATGGTA 107722 ||| ||||||| Sbjct 188 AGCTCTATTATGGTA 202 >seq230881 Length=2878 Score = 93.3 bits (102), Expect = 9e-14 Identities = 275/416 (66%), Gaps = 10/416 (2%) Strand=Plus/Minus Query 48350 TGGTGATGCAGGAGTCGGTAAAACTCAGATCGTCGATGGTTTTGCACAAGCCATTGCTGA 48409 |||||| | || ||||||||||| || || || ||||| || || |||| | | Sbjct 713 TGGTGAACCTGGTGTCGGTAAAACCGCCATTGTTGAAGGTTTAGCTCAGCGTATTGTTAA 654 Query 48410 TGGTGACGTACCTGACTATCTGAAAGGTGTTGAGGTATTATCTCTTAACGTTTCTGCTGT 48469 |||||| || ||||| | ||| | |||||| || | || | | | Sbjct 653 TGGTGAAGTCCCTGAAGGGATTAAAAATAAACGGGTATTGTCATTAGACATGGGGTCGTT 594 Query 48470 AACTGCTGGTACAAAATACCGTGGTGAATTCGAAGAACGTATGGAAGGTATTATTAAA-G 48528 || ||| || | ||||| || ||||| ||||||||||| | ||| | ||||||| | Sbjct 593 AATTGCGGGAGCCAAATATCGCGGTGAGTTCGAAGAACGCTTAAAAGC-AGTATTAAATG 535 Query 48529 AACTTAAAAAACGAGAAAAT---GTAATTTTGTTCATTGATGAAGTACATATTATGATGG 48585 | || | || |||| | || ||| |||| |||||||| | |||| ||| | | Sbjct 534 AGCTATCACAAGAAGAAGGTCAGGTCATTCTGTTTATTGATGAGCTGCATACCATGGTCG 475 Query 48586 GTGCTGGTGGTAGCAGCACTGGATCTATGGATATGAGCAATATCATGAAACCTGCACTTT 48645 | || ||| || || || | |||||| | ||||| | || ||||| | Sbjct 474 GCGCAGGTA--AGG-GCGAGGGCGCAATGGATGCTGGTAATATGCTTAAGCCTGCTTTAG 418 Query 48646 CACGTGGTGATATTCGTGTTATCGGTGCAACAACTTATGAGGAATATCGCCAGAACATTG 48705 ||||||||||| | | | | |||| |||||||| ||| |||||||| || | |||| Sbjct 417 CACGTGGTGATTTGCATTGTGTCGGCGCAACAACACTTGATGAATATCGTCAATATATTG 358 Query 48706 AAAAAGATGCTGCATTTTCCCGCCGCTTCACTAAAATTGA-TGTAGTTGAACCTAG 48760 | |||||||||||| || ||||| || | |||| | | ||| | |||||| || Sbjct 357 AGAAAGATGCTGCACTTGAACGCCG-TTTTCAAAAAGTAATTGTTGATGAACCGAG 303 >seq311881 Length=4102 Score = 87.8 bits (96), Expect = 4e-12 Identities = 171/249 (69%), Gaps = 8/249 (3%) Strand=Plus/Minus Query 48474 GCTGGTACAAAATACCGTGGTGAATTCGAAGAACGTATGGAAGGTATTATTAAA-GAACT 48532 || ||| | ||||||||||| ||||| ||||| ||| | || | ||||||| ||||| Sbjct 3584 GCCGGTGCTAAATACCGTGGCGAATTTGAAGAGCGTTTAAAATC-AGTATTAAATGAACT 3526 Query 48533 ---TAAAAAACGAGAAAATGTAATTTTGTTCATTGATGAAGTACATATTATGATGGGTGC 48589 |||| || || | || ||||| || ||||||||| |||| | || | || || Sbjct 3525 GGCTAAAGAAGAAGGCCAAGTGATTTTATTTATTGATGAAATACACACAATTGTAGGCGC 3466 Query 48590 TGGTGGTAGCAGCACTGGATCTATGGATATGAGCAATATCATGAAACCTGCACTTTCACG 48649 ||| | || ||| | |||||| ||||||| | ||||| || ||| | || Sbjct 3465 AGGT---AAAAGTGATGGCGCAATGGATGCAGGCAATATGCTAAAACCGGCGCTTGCCCG 3409 Query 48650 TGGTGATATTCGTGTTATCGGTGCAACAACTTATGAGGAATATCGCCAGAACATTGAAAA 48709 ||| || | | | | |||||||| ||| ||| |||||||| | |||||||||| Sbjct 3408 TGGCGAATTACATTGCGTAGGTGCAACCACTCTTGATGAATATCGTAAATACATTGAAAA 3349 Query 48710 AGATGCTGC 48718 ||| || || Sbjct 3348 AGACGCCGC 3340 >seq508035 Length=962 Score = 86.0 bits (94), Expect = 1e-11 Identities = 170/249 (68%), Gaps = 6/249 (2%) Strand=Plus/Minus Query 48473 TGCTGGTACAAAATACCGTGGTGAATTCGAAGAACGTATGGAAGGTATTATTAAAGAACT 48532 ||| ||| |||||| ||||||||| || ||||| || | ||| | | | || | Sbjct 780 TGCGGGTGCAAAATTCCGTGGTGAGTTTGAAGAGCGACTCAAAGCGGTACTCAGCGATTT 721 Query 48533 TAAAAAACGAGAA---AATGTAATTTTGTTCATTGATGAAGTACATATTATGATGGGTGC 48589 ||| | |||| ||||| || || || || ||||| | |||| | | | ||||| Sbjct 720 ATCAAAGCAAGAAGGCAATGTCATCTTATTTATCGATGAGTTGCATACTTTAGTAGGTGC 661 Query 48590 TGGTGGTAGCAGCACTGGATCTATGGATATGAGCAATATCATGAAACCTGCACTTTCACG 48649 |||| ||| | ||| | |||||| | ||||| | |||||||| ||| | || Sbjct 660 TGGTAA-AGCCGA--TGGTGCGATGGATGCCGGTAATATGCTAAAACCTGCGCTTGCGCG 604 Query 48650 TGGTGATATTCGTGTTATCGGTGCAACAACTTATGAGGAATATCGCCAGAACATTGAAAA 48709 |||||| | | | ||||||| |||||| || || ||||||||| |||| ||||| Sbjct 603 TGGTGAGCTACACTGTGTCGGTGCGACAACTCTCGATGAGTATCGCCAGTACATCGAAAA 544 Query 48710 AGATGCTGC 48718 |||||| || Sbjct 543 AGATGCGGC 535 >seq351952 Length=416 Score = 84.2 bits (92), Expect = 5e-11 Identities = 134/191 (70%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 320401 TTCAAGAACAA-CCAAAAATTGAAGGTGGTCAACATTTAAATGTAAATGTATTATCACGT 320459 |||||| ||| ||| | ||||||||||||||||| ||||| || |||||| | ||| Sbjct 224 TTCAAGCACACGCCAGATATTGAAGGTGGTCAACACTTAAACGTTAATGTAATGAACCGT 165 Query 320460 TCTCAATTAGAAGAAGCACAGAAATTTCCTGAAAAATATCCTCAACTTACTATTCGTGTT 320519 ||| || ||| | || ||| || || ||||| ||| | || |||||||| Sbjct 164 GAAATGTTATTGGATGCAATGGAAAATCCAGATAAGTATCCACAATTAACAATTCGTGTA 105 Query 320520 TCTGGATATGCAGTTCGTTTTAATTCTCTTACGAAAGAACAACAAAATGATGTAATTTCA 320579 || || || ||||| || ||||| || | || ||||||| | | |||||||| || Sbjct 104 TCGGGTTACGCAGTACGATTTAACTCGTTAACTGCAGAACAAAAGCAAGATGTAATCACA 45 Query 320580 CGAACTTTCAC 320590 || || || || Sbjct 44 CGTACCTTTAC 34 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1101528341556498